Literature DB >> 30683797

Structure and function analysis of the C. elegans aminophospholipid translocase TAT-1.

Yu-Zen Chen1, Katharina Klöditz2, Eui-Seung Lee1, Diemmy Pham Nguyen1, Quan Yuan3, Jack Johnson1, Yannick Lee-Yow1, Adam Hall1, Shohei Mitani4, Ning-Shao Xia3, Bengt Fadeel5, Ding Xue6.   

Abstract

The Caenorhabditis elegans aminophospholipid translocase TAT-1 maintains phosphatidylserine (PS) asymmetry in the plasma membrane and regulates endocytic transport. Despite these important functions, the structure-function relationship of this protein is poorly understood. Taking advantage of the tat-1 mutations identified by the C. elegans million mutation project, we investigated the effects of 16 single amino acid substitutions on the two functions of the TAT-1 protein. Two substitutions that alter a highly conserved PISL motif in the fourth transmembrane domain and a highly conserved DKTGT phosphorylation motif, respectively, disrupt both functions of TAT-1, leading to a vesicular gut defect and ectopic PS exposure on the cell surface, whereas most other substitutions across the TAT-1 protein, often predicted to be deleterious by bioinformatics programs, do not affect the functions of TAT-1. These results provide in vivo evidence for the importance of the PISL and DKTGT motifs in P4-type ATPases and improve our understanding of the structure-function relationship of TAT-1. Our study also provides an example of how the C. elegans million mutation project helps decipher the structure, functions, and mechanisms of action of important genes.
© 2019. Published by The Company of Biologists Ltd.

Entities:  

Keywords:  C. elegans; Endocytic transport; Million mutation project; P4-ATPase; Phosphatidylserine; TAT-1

Mesh:

Substances:

Year:  2019        PMID: 30683797      PMCID: PMC6432707          DOI: 10.1242/jcs.227660

Source DB:  PubMed          Journal:  J Cell Sci        ISSN: 0021-9533            Impact factor:   5.285


  33 in total

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Authors:  Katharina Klöditz; Yu-Zen Chen; Ding Xue; Bengt Fadeel
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Review 3.  The ins and outs of phospholipid asymmetry in the plasma membrane: roles in health and disease.

Authors:  Bengt Fadeel; Ding Xue
Journal:  Crit Rev Biochem Mol Biol       Date:  2009 Sep-Oct       Impact factor: 8.250

Review 4.  Protein involvement in transmembrane lipid asymmetry.

Authors:  P F Devaux
Journal:  Annu Rev Biophys Biomol Struct       Date:  1992

5.  A method and server for predicting damaging missense mutations.

Authors:  Ivan A Adzhubei; Steffen Schmidt; Leonid Peshkin; Vasily E Ramensky; Anna Gerasimova; Peer Bork; Alexey S Kondrashov; Shamil R Sunyaev
Journal:  Nat Methods       Date:  2010-04       Impact factor: 28.547

6.  A role for oxidative stress in apoptosis: oxidation and externalization of phosphatidylserine is required for macrophage clearance of cells undergoing Fas-mediated apoptosis.

Authors:  Valerian E Kagan; Bettina Gleiss; Yulia Y Tyurina; Vladimir A Tyurin; Carina Elenström-Magnusson; Shang-Xi Liu; F Behice Serinkan; Antonio Arroyo; Joya Chandra; Sten Orrenius; Bengt Fadeel
Journal:  J Immunol       Date:  2002-07-01       Impact factor: 5.422

7.  Differential effects of progressive familial intrahepatic cholestasis type 1 and benign recurrent intrahepatic cholestasis type 1 mutations on canalicular localization of ATP8B1.

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8.  The C. elegans P4-ATPase TAT-1 regulates lysosome biogenesis and endocytosis.

Authors:  Anne-Françoise Ruaud; Lars Nilsson; Fabrice Richard; Morten Krog Larsen; Jean-Louis Bessereau; Simon Tuck
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9.  Critical roles of isoleucine-364 and adjacent residues in a hydrophobic gate control of phospholipid transport by the mammalian P4-ATPase ATP8A2.

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10.  Predicting the functional effect of amino acid substitutions and indels.

Authors:  Yongwook Choi; Gregory E Sims; Sean Murphy; Jason R Miller; Agnes P Chan
Journal:  PLoS One       Date:  2012-10-08       Impact factor: 3.240

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  2 in total

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Journal:  Sci Rep       Date:  2021-04-07       Impact factor: 4.379

Review 2.  Worms, Fat, and Death: Caenorhabditis elegans Lipid Metabolites Regulate Cell Death.

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  2 in total

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