Literature DB >> 30679340

Characterizing mutagenic effects of recombination through a sequence-level genetic map.

Bjarni V Halldorsson1,2, Gunnar Palsson3, Olafur A Stefansson3, Hakon Jonsson3, Marteinn T Hardarson3, Hannes P Eggertsson3,4, Bjarni Gunnarsson3, Asmundur Oddsson3, Gisli H Halldorsson3, Florian Zink3, Sigurjon A Gudjonsson3, Michael L Frigge3, Gudmar Thorleifsson3, Asgeir Sigurdsson3, Simon N Stacey3, Patrick Sulem3, Gisli Masson3, Agnar Helgason3,5, Daniel F Gudbjartsson3,4, Unnur Thorsteinsdottir3,6, Kari Stefansson1,6.   

Abstract

Genetic diversity arises from recombination and de novo mutation (DNM). Using a combination of microarray genotype and whole-genome sequence data on parent-child pairs, we identified 4,531,535 crossover recombinations and 200,435 DNMs. The resulting genetic map has a resolution of 682 base pairs. Crossovers exhibit a mutagenic effect, with overrepresentation of DNMs within 1 kilobase of crossovers in males and females. In females, a higher mutation rate is observed up to 40 kilobases from crossovers, particularly for complex crossovers, which increase with maternal age. We identified 35 loci associated with the recombination rate or the location of crossovers, demonstrating extensive genetic control of meiotic recombination, and our results highlight genes linked to the formation of the synaptonemal complex as determinants of crossovers.
Copyright © 2019 The Authors, some rights reserved; exclusive licensee American Association for the Advancement of Science. No claim to original U.S. Government Works.

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Year:  2019        PMID: 30679340     DOI: 10.1126/science.aau1043

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  73 in total

1.  Age-related accumulation of de novo mitochondrial mutations in mammalian oocytes and somatic tissues.

Authors:  Barbara Arbeithuber; James Hester; Marzia A Cremona; Nicholas Stoler; Arslan Zaidi; Bonnie Higgins; Kate Anthony; Francesca Chiaromonte; Francisco J Diaz; Kateryna D Makova
Journal:  PLoS Biol       Date:  2020-07-15       Impact factor: 8.029

2.  Sex Differences in the Recombination Landscape.

Authors:  Jason M Sardell; Mark Kirkpatrick
Journal:  Am Nat       Date:  2019-12-09       Impact factor: 3.926

3.  A Fine-Scale Genetic Map for Vervet Monkeys.

Authors:  Susanne P Pfeifer
Journal:  Mol Biol Evol       Date:  2020-07-01       Impact factor: 16.240

4.  How Good Are Predictions of the Effects of Selective Sweeps on Levels of Neutral Diversity?

Authors:  Brian Charlesworth
Journal:  Genetics       Date:  2020-10-26       Impact factor: 4.562

5.  Sex-specific variation in the genome-wide recombination rate.

Authors:  April L Peterson; Bret A Payseur
Journal:  Genetics       Date:  2021-03-03       Impact factor: 4.562

6.  The germline mutational process in rhesus macaque and its implications for phylogenetic dating.

Authors:  Lucie A Bergeron; Søren Besenbacher; Jaco Bakker; Jiao Zheng; Panyi Li; George Pacheco; Mikkel-Holger S Sinding; Maria Kamilari; M Thomas P Gilbert; Mikkel H Schierup; Guojie Zhang
Journal:  Gigascience       Date:  2021-05-05       Impact factor: 6.524

Review 7.  The origin of human mutation in light of genomic data.

Authors:  Vladimir B Seplyarskiy; Shamil Sunyaev
Journal:  Nat Rev Genet       Date:  2021-06-23       Impact factor: 53.242

8.  A missense in HSF2BP causing primary ovarian insufficiency affects meiotic recombination by its novel interactor C19ORF57/BRME1.

Authors:  Natalia Felipe-Medina; Sandrine Caburet; Fernando Sánchez-Sáez; Yazmine B Condezo; Dirk G de Rooij; Laura Gómez-H; Rodrigo Garcia-Valiente; Anne Laure Todeschini; Paloma Duque; Manuel Adolfo Sánchez-Martin; Stavit A Shalev; Elena Llano; Reiner A Veitia; Alberto M Pendás
Journal:  Elife       Date:  2020-08-26       Impact factor: 8.140

9.  Unified single-cell analysis of testis gene regulation and pathology in five mouse strains.

Authors:  Min Jung; Daniel Wells; Jannette Rusch; Suhaira Ahmad; Jonathan Marchini; Simon R Myers; Donald F Conrad
Journal:  Elife       Date:  2019-06-25       Impact factor: 8.140

Review 10.  Crossover Interference: Shedding Light on the Evolution of Recombination.

Authors:  Sarah P Otto; Bret A Payseur
Journal:  Annu Rev Genet       Date:  2019-08-20       Impact factor: 16.830

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