Literature DB >> 30649663

Isolation and Expression Analysis of Three Types of α-Carbonic Anhydrases from the Antarctic Alga Chlamydomonas sp. ICE-L under Different Light Stress Treatments.

Chongli Shi1,2, Meiling An2,3,4, Jinlai Miao5,6,7, Yingying He2,4, Zhou Zheng2,3,4, Changfeng Qu2, Xixi Wang2, Huan Lin1, Junhong Liu1.   

Abstract

Carbonic anhydrases (CAs) are a class of zinc-containing metalloenzymes that can reversibly catalyse the hydration reaction of carbon dioxide. Antarctic algae are the most critical component of the Antarctic ecosystem; algae can enter the carbon cycle food chain by fixing carbon dioxide from the air. In this study, the complete open reading frames (ORFs) of CA1 (GenBank ID KY826431), CA2 (GenBank ID KY826432), and CA3 (GenBank ID KY826433), encoding CAs in the Antarctic ice microalga Chlamydomonas. sp. ICE-L, were successfully cloned using reverse transcription-polymerase chain reaction (RT-PCR). In addition, the expression patterns of CAs under blue light, under UV light, and in the dark were determined by quantitative reverse transcription-polymerase chain reaction (qRT-PCR). The CA1, CA2, and CA3 ORFs encode proteins of 376, 430, and 419 amino acids, respectively. Phylogenetic analysis revealed that all amino acid sequences showed high homology with those of C. sp. ICE-L. There are six types of algal CAs; we hypothesised that the CAs studied here are most likely α-CAs. Expression analysis showed that the transcription level of the CAs was influenced by both UV light and blue light. These findings provide additional insight into the molecular mechanisms of CAs and will accelerate the development of CAs for applications in agriculture and environmental governance.

Entities:  

Keywords:  Bioinformatic analysis; Carbonic anhydrase; Chlamydomonas sp. ICE-L; qRT-PCR

Mesh:

Substances:

Year:  2019        PMID: 30649663     DOI: 10.1007/s12033-018-00152-4

Source DB:  PubMed          Journal:  Mol Biotechnol        ISSN: 1073-6085            Impact factor:   2.695


  33 in total

1.  A novel evolutionary lineage of carbonic anhydrase (epsilon class) is a component of the carboxysome shell.

Authors:  Anthony K-C So; George S Espie; Eric B Williams; Jessup M Shively; Sabine Heinhorst; Gordon C Cannon
Journal:  J Bacteriol       Date:  2004-02       Impact factor: 3.490

2.  Carbonic anhydrase inhibitors. Inhibition of cytosolic isozyme XIII with aromatic and heterocyclic sulfonamides: a novel target for the drug design.

Authors:  Jonna M Lehtonen; Seppo Parkkila; Daniela Vullo; Angela Casini; Andrea Scozzafava; Claudiu T Supuran
Journal:  Bioorg Med Chem Lett       Date:  2004-07-16       Impact factor: 2.823

3.  Biochemistry: a cadmium enzyme from a marine diatom.

Authors:  Todd W Lane; Mak A Saito; Graham N George; Ingrid J Pickering; Roger C Prince; François M M Morel
Journal:  Nature       Date:  2005-05-05       Impact factor: 49.962

Review 4.  Carbonic anhydrases: novel therapeutic applications for inhibitors and activators.

Authors:  Claudiu T Supuran
Journal:  Nat Rev Drug Discov       Date:  2008-02       Impact factor: 84.694

5.  CONFIDENCE LIMITS ON PHYLOGENIES: AN APPROACH USING THE BOOTSTRAP.

Authors:  Joseph Felsenstein
Journal:  Evolution       Date:  1985-07       Impact factor: 3.694

6.  Cloning, Expression Analysis and Enzyme Activity Assays of the α-Carbonic Anhydrase Gene from Chlamydomonas sp. ICE-L.

Authors:  Changfeng Qu; Yingying He; Zhou Zheng; Meiling An; Lulu Li; Xixi Wang; Xiaodong He; Yibin Wang; Fangming Liu; Jinlai Miao
Journal:  Mol Biotechnol       Date:  2018-01       Impact factor: 2.695

7.  Animal behaviour: elephants are capable of vocal learning.

Authors:  Joyce H Poole; Peter L Tyack; Angela S Stoeger-Horwath; Stephanie Watwood
Journal:  Nature       Date:  2005-03-24       Impact factor: 49.962

8.  Cloning and Stress-Induced Expression Analysis of Calmodulin in the Antarctic Alga Chlamydomonas sp. ICE-L.

Authors:  Ying-Ying He; Yi-Bin Wang; Zhou Zheng; Fang-Ming Liu; Mei-Ling An; Xiao-Dong He; Chang-Feng Qu; Lu-Lu Li; Jin-Lai Miao
Journal:  Curr Microbiol       Date:  2017-05-17       Impact factor: 2.188

9.  Native architecture of the Chlamydomonas chloroplast revealed by in situ cryo-electron tomography.

Authors:  Benjamin D Engel; Miroslava Schaffer; Luis Kuhn Cuellar; Elizabeth Villa; Jürgen M Plitzko; Wolfgang Baumeister
Journal:  Elife       Date:  2015-01-13       Impact factor: 8.140

Review 10.  Plant Carbonic Anhydrases: Structures, Locations, Evolution, and Physiological Roles.

Authors:  Robert J DiMario; Harmony Clayton; Ananya Mukherjee; Martha Ludwig; James V Moroney
Journal:  Mol Plant       Date:  2016-09-16       Impact factor: 13.164

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