Literature DB >> 28516199

Cloning and Stress-Induced Expression Analysis of Calmodulin in the Antarctic Alga Chlamydomonas sp. ICE-L.

Ying-Ying He1,2, Yi-Bin Wang3,4,5, Zhou Zheng1,2,6, Fang-Ming Liu1,2,6, Mei-Ling An1,2, Xiao-Dong He1,2, Chang-Feng Qu1,2, Lu-Lu Li1,2, Jin-Lai Miao7,8,9.   

Abstract

Calmodulin (CaM) is a Ca2+-binding protein that plays a role in several Ca2+ signaling pathways, which dynamically regulates the activities of hundreds of proteins. The ice alga Chlamydomonas sp. ICE-L, which has the ability to adapt to extreme polar conditions, is a crucial primary producer in Antarctic ecosystem. This study hypothesized that Cam helps the ICE-L to adapt to the fluctuating conditions in the polar environment. It first verified the overall length of Cam, through RT-PCR and RACE-PCR, based on partial Cam transcriptome library of ICE-L. Then, the nucleotide and predicted amino acid sequences were, respectively, analyzed by various bioinformatics approaches to gain more insights into the computed physicochemical properties of the CaM. Potential involvements of Cam in responding to certain stimuli (i.e., UVB radiation, high salinity, and temperature) were investigated by differential expression, measuring its transcription levels by means of quantitative RT-PCR. Results showed that CaM was indeed inducible and regulated by high UVB radiation, high salinity, and nonoptimal temperature conditions. Different conditions had different expression tendencies, which provided an important basis for investigating the adaptation mechanism of Cam in ICE-L.

Entities:  

Keywords:  Antarctic ice alga; Bioinformatics analysis; Calmodulin; Chlamydomonas sp. ICE-L; QRT-PCR

Mesh:

Substances:

Year:  2017        PMID: 28516199     DOI: 10.1007/s00284-017-1263-5

Source DB:  PubMed          Journal:  Curr Microbiol        ISSN: 0343-8651            Impact factor:   2.188


  28 in total

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Journal:  Methods       Date:  2001-12       Impact factor: 3.608

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Journal:  FEMS Microbiol Ecol       Date:  2001-05       Impact factor: 4.194

3.  Temperature regulates fatty acid desaturases at a transcriptional level and modulates the fatty acid profile in the Antarctic microalga Chlamydomonas sp. ICE-L.

Authors:  Meiling An; Shanli Mou; Xiaowen Zhang; Naihao Ye; Zhou Zheng; Shaona Cao; Dong Xu; Xiao Fan; Yitao Wang; Jinlai Miao
Journal:  Bioresour Technol       Date:  2013-02-08       Impact factor: 9.642

Review 4.  Calmodulin and STIM proteins: Two major calcium sensors in the cytoplasm and endoplasmic reticulum.

Authors:  Christopher B Marshall; Tadateru Nishikawa; Masanori Osawa; Peter B Stathopulos; Mitsuhiko Ikura
Journal:  Biochem Biophys Res Commun       Date:  2015-04-24       Impact factor: 3.575

Review 5.  Calmodulin as an ion channel subunit.

Authors:  Yoshiro Saimi; Ching Kung
Journal:  Annu Rev Physiol       Date:  2002       Impact factor: 19.318

6.  Structural analysis of calmodulin binding by nNOS inhibitory amphibian peptides.

Authors:  Antonio N Calabrese; John H Bowie; Tara L Pukala
Journal:  Biochemistry       Date:  2014-12-30       Impact factor: 3.162

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Authors:  T N Davis; M S Urdea; F R Masiarz; J Thorner
Journal:  Cell       Date:  1986-11-07       Impact factor: 41.582

8.  Interchange of autoinhibitory domain conformations in plasma-membrane Ca2+-ATPase-calmodulin complexes.

Authors:  Abhijit Mandal; Mangala Roshan Liyanage; Asma Zaidi; Carey K Johnson
Journal:  Protein Sci       Date:  2008-01-24       Impact factor: 6.725

Review 9.  Calmodulin and the regulation of smooth muscle contraction.

Authors:  M P Walsh
Journal:  Mol Cell Biochem       Date:  1994-06-15       Impact factor: 3.396

10.  The calmodulin-binding transcription factor OsCBT suppresses defense responses to pathogens in rice.

Authors:  Sung Cheol Koo; Man Soo Choi; Hyun Jin Chun; Dong Bum Shin; Bong Soo Park; Yul Ho Kim; Hyang-Mi Park; Hak Soo Seo; Jong Tae Song; Kyu Young Kang; Dae-Jin Yun; Woo Sik Chung; Moo Je Cho; Min Chul Kim
Journal:  Mol Cells       Date:  2009-05-15       Impact factor: 5.034

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  3 in total

1.  Molecular cloning and functional analysis of a Δ12-fatty acid desaturase from the Antarctic microalga Chlamydomonas sp. ICE-L.

Authors:  Yingying He; Zhou Zheng; Meiling An; Hao Chen; Changfeng Qu; Fangming Liu; Yibin Wang; Jinlai Miao; Xuguang Hou
Journal:  3 Biotech       Date:  2019-08-10       Impact factor: 2.406

2.  A diguanylate cyclase regulates biofilm formation in Rhodococcus sp. NJ-530 from Antarctica.

Authors:  Xixi Wang; Yingying He; Yashan Deng; Zhicong Zuo; Dan Li; Fushan Chen; Changfeng Qu; Jinlai Miao
Journal:  3 Biotech       Date:  2021-12-25       Impact factor: 2.406

3.  Isolation and Expression Analysis of Three Types of α-Carbonic Anhydrases from the Antarctic Alga Chlamydomonas sp. ICE-L under Different Light Stress Treatments.

Authors:  Chongli Shi; Meiling An; Jinlai Miao; Yingying He; Zhou Zheng; Changfeng Qu; Xixi Wang; Huan Lin; Junhong Liu
Journal:  Mol Biotechnol       Date:  2019-03       Impact factor: 2.695

  3 in total

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