| Literature DB >> 30646527 |
Alessandro Tonacci1, Gianluca Bagnato2, Gianluca Pandolfo3, Lucia Billeci4, Francesco Sansone5, Raffaele Conte6, Sebastiano Gangemi7.
Abstract
Autism Spectrum Disorder (ASD) is a category of neurodevelopmental disturbances seriously affecting social skills, to which the scientific community has paid great attention in last decades. To date, their pathogenesis is still unknown, but several studies highlighted the relevance of gene-environment interactions in the onset of ASD. In addition, an immune involvement was seen in a wide number of ASD subjects, leading several researchers to hypothesize a possible common pathogenesis between ASD and immune disturbances, including Atopic Dermatitis (AD). In general, among potential contributing factors, microRNAs (miRNAs), small molecules capable of controlling gene expression and targeting mRNA transcripts, might represent one of the major circulating link, possibly unraveling the connections between neurodevelopmental and immune conditions. Under such premises, we conducted a systematic literature review, under the PRISMA guidelines, trying to define the panel of common miRNAs involved in both ASD and AD. The review retrieved articles published between January 1, 2005, and December 13, 2018, in PubMed, ScienceDirect, PsycARTICLES, and Google Scholar. We found a handful of works dealing with miRNAs in ASD and AD, with the most overlapping dysregulated miRNAs being miR-146 and miR-155. Two possible compounds are abnormally regulated in both ASD and AD subjects, possibly cross-contributing to the interactions between the two disorders, setting the basis to investigate more precisely the possible link between ASD and AD from another, not just clinical, perspective.Entities:
Keywords: Allergy; Autistic Disorder; Dermatitis; Genetics; Immunity; MicroRNAs
Year: 2019 PMID: 30646527 PMCID: PMC6352260 DOI: 10.3390/jcm8010088
Source DB: PubMed Journal: J Clin Med ISSN: 2077-0383 Impact factor: 4.241
Figure 1Study selection.
MicroRNAs directly involved in autism (*: see explanation in the following column).
| Study | Design | Findings | ||
|---|---|---|---|---|
| Up-Regulated miRNA | Down-Regulated miRNA | |||
| Abu-Elneel et al. (2008) [ | 26 (13/13) | Measure of the expression level of 466 human miRNAs from postmortem cerebellar tissue by multiplex real-time PCR, with 377 miRNAs detected and used for further analysis | miR-106a, miR-106b, miR-140, miR-146b, miR-181d, miR-193b, miR-320a, miR-381, miR-432, miR-539, miR-550, miR-652 | miR-7, miR-15a, miR-15b, miR-21, miR-23a, miR-27a, miR-93, miR-95, miR-128, miR-129, miR-132, miR-148b, miR-212, miR-431, miR-484, miR-598 |
| Sarachana et al. (2010) [ | 14 (5/9) | Lymphoblasts derived from peripheral lymphocytes were obtained; miRNA expression profiling performed by high-throughput miRNA microarray analysis. Differentially expressed miRNAs confirmed by qRT-PCR analysis, putative target genes of two of the confirmed miRNA validated by knockdown and overexpression of the respective miRNAs | miR-16-2, miR-106b, miR-132, miR-133b, miR-136, miR-139, miR-148b, miR-153, miR-182, miR-189, miR-190, miR-199b, miR-211, miR-219, miR-326, miR-367, miR-455, miR-495, miR-518a, miR-520b | miR-23a, miR-23b, miR-25, miR-29b, miR-30e, miR-93, miR-103, miR-107, miR-185, miR-186, miR-191, miR-194, miR-195, miR-205, miR-342, miR-346, miR-376a-AS, miR-451, miR-519c, miR-524 |
| Talebizadeh et al. (2008) [ | 12 (6/6) | Six subject with Autism Spectrum Disorders (ASD) (3 males, aged 5, 12, and 14 years, and 3 females, aged 6, 11, and 13 years), 6 age- and gender-matched TD controls. Lymphoblastoid cell lines, quantitative PCR, | miR-23a, miR-23b, miR-132, miR-146a, miR-146b, miR-663 | miR-92, miR-320, miR-363 |
| Mundalil Vasu et al. (2014) [ | 110 (55/55) | 55 ASD (48 males, 6 females, aged 11.29 ± 5.45 years), 55 TD controls (41 males, 14 females, aged 11.3 ± 2.37 years). RNA extracted from serum, mature miRNAs selectively converted into cDNA. The expression of 125 mature miRNAs was compared between pooled control and ASD samples. The differential expression of 14 miRNAs further validated by SYBR Green quantitative PCR of individual samples. Target genes and pathways of miRNAs predicted by DIANA mirPath software | miR-19b-3p, miR-27a-3p, miR-101-3p, miR-106-5p, miR-130a-3p, miR-195b-5p | miR-151a-3p, miR-181b-5p, miR-320a, miR-328, miR-433, miR-489, miR-572, miR-663a |
| Popov et al. (2012) [ | 55 (30/25) | Thirty ASD (24 males, 6 females, aged 3–20), 25 TD controls (20 males, 5 females, aged 3–20 years). Whole blood collection, analysis of gene expression changes applying LC expression profiling service, using pooled whole blood-derived total RNA samples | miR-486-3p | |
| Seno et al. (2011) [ | 42 (20/22) | 20 severe ASD (13 males and 7 females), 22 unaffected siblings (19 males and 3 females). Lymphoblastoid cell lines, RNA was extracted and assayed using Illumina gene and miRNA expression arrays. Control quality in BeadStudio (Illumina) | miR-10a, miR-30a, miR-181a, miR-181b, miR-181c, miR-199b-5p, miR-338-3p, miR-486-3p, miR-486-5p, miR-500, miR-502-3p, miR-548 | miR-199a-5p, miR-455-3p, miR-577, miR-656 |
| Mor et al. (2015) [ | 24 (12/12) | Brain tissue samples taken from postmortem Brodmann’s area 10 | miR-7-5p, miR-19a-3p, miR-19b-3p, miR-21-3p, miR-21-5p, miR-142-3p, miR-142-5p, miR-144-3p, miR-146a-5p, miR-155-5p, miR-219-5p, miR-338-5p, miR-379-5p, miR-451a, miR-494, miR-3168 | miR-34a-5p, miR-92b-3p, miR-211-5p, miR-3960 |
| Ander et al. (2015) [ | 18 (10/8) | Brain tissue samples taken from postmortem Brodmann’s areas 22, 41, 42 | miR-664-3p, miR-4709-3p, miR-4753-5p | miR-1, miR-297, miR-4742-3p |
| Wu et al. (2016) [ | 56 (28/28) | Tissue samples taken from postmortem cerebellar cortex, Brodmann area 9 | miR-10a-5p, miR-18b-5p, miR-20b-5p, miR-21-3p, miR-23a-3p, miR-107, miR-129-2-3p, miR-130b-5p, miR-148a-3p, miR-155-5p, miR-218-2-3p, miR-221-3p, miR-223-3p, miR-335-3p, miR-363-3p, miR-424-3p, miR-424-5p, miR-425-3p, miR-449b-5p, miR-450b-5p, miR-484, miR-629-5p, miR-651-5p, miR-708-5p, miR-766-3p, miR-874-3p, miR-887-3p, miR-940, miR-1277-3p, miR-3938, miR-2277-5p, let-7g-3p | miR-204-3p, miR-491-5p, miR-619-5p, miR-3687, miR-5096 |
| Huang et al. (2015) [ | 40 (20/20) | Peripheral blood sample taken, microarray (5 ASD/5 controls), and quantitative Real-Time PCR (15 ASD/15 controls) | miR-34b-3p, miR-34c-3p, miR-483-5p, miR-494, miR-564, miR-642a-3p, miR-574-5p, miR-575, miR-921, miR-1246, miR-1249, miR-1273c, miR-4270, miR-4299, miR-4436a, miR-4443, miR-4516, miR-4669, miR-4721, miR-4728-5p, miR-4788, miR-5739, miR-6086, miR-6125 | miR-15a-5p, miR-15b-5p, miR-16-5p, miR-19b-3p, miR-20a-5p, miR-92a-3p, miR-103a-3p, miR-195-5p, miR-451a, miR-574-3p, miR-940, miR-1228-3p, miR-3613-3p, miR-3935, miR-4436b-5p, miR-4665-5p, miR-4700-3p, let-7a-5p, let-7d-5p, let-7f-5p |
| Toma et al. (2015) [ | 1309 (636/673) | Genomic DNA isolated from blood lymphocytes, or from saliva | miR-133b/miR-206 cluster; pooled analysis: miR-133b/miR-206 and miR-17/miR-18a/miR-19a/miR-20a/miR- | N/A |
| Hicks et al. (2016) [ | 45 (24/21) | Salivary samples | miR-7-5p, miR-28-5p, miR-127-3p, miR-140-3p, miR-191-5p, miR-218-5p, miR-335-3p, miR-628-5p, miR-2467-5p, miR-3529-3p | miR-23a-3p, miR-27a-3p, miR-30e-5p, miR-32-5p |
| Nguyen et al. (2016) [ | 14 (8/6) | Samples taken from olfactory mucosal stem cells and skin fibroblasts or Peripheral Blood Mononuclear Cells. Measured through microarray and quantitative Real-Time PCR validation | miR-146a | miR-221, miR-654-5p, miR-656 |
| Kichukova et al. (2017) [ | 60 (30/30) | Blood samples. Quantitative Real-Time PCR validation | miR-18b-3p, miR-106b-5p, miR-142-3p, miR-210-5p, miR-365a-3p, miR-374b-5p, miR-619-5p, miR-664a-3p, miR-3620-3p, miR-4489, miR-8052 | hsa-let-7i-3p, miR -15a-5p, miR -20b-3p, miR -29c-5p, miR -96-5p, miR -145-5p, miR -183-5p, miR -193b-3p, miR -197-5p, miR-199a-5p, miR -301a-3p, miR -328-3p, miR -424-5p, miR -486-3p, miR -487b-3p, miR -500a-5p, miR -504-5p, miR -576-5p, miR -587-3p, miR-589-3p, miR -664b-3p, miR -671-3p, miR -3064-5p, miR -3135a, miR -3674, miR -3687, miR-3909, miR -6799-3p, miR -6849-3p |
| Jyonouchi et al. (2017) [ | 96 (69/27) | Peripheral blood monocytes samples, miRNA expression determined by high-throughput sequencing | hsa-let-7a-1, hsa-let-7a-2, hsa-let-7a-3, hsa-let-7f-1, hsa-let-7f-2, hsa-let-7g, hsa-let-7i, miR-17, miR-26a-2, miR-30b, miR-30c-1, miR-30c-2, miR-98, miR-106b, miR-130a, miR-148a, miR-148b, miR-150, miR-186, miR-301a, miR-374b, miR-494, miR-1248, miR-3607, miR-3609 | hsa-let-7b, miR-15a, miR-15b, miR-16-1, miR-16-2, miR-18a, miR-19a, miR-19b-1, miR-19b-2, miR-20a, miR-21, miR-27a, miR-27b, miR-29a, miR-29b-1, miR-29b-2, miR-29c, miR-30e, miR-93, miR-101-1, miR-101-2, miR-103a-1, miR-103a-2, miR-107, miR-126, miR-142, miR-145, miR-146a, miR-151a, miR-181a-1, miR-181a-2, miR-199b, miR-221, miR-222, miR-320a, miR-376c, miR-409, miR-423, miR-484, miR-625, miR-4433b, miR-5701-1, miR-5701-2 |
| Pagan et al. (2017) [ | 517 (239/278) * | Post-mortem pineal glands (melatonin) in 9 | Plasmatic and pineal miR-451 | N/A |
| Nguyen et al. (2018) [ | 11 (5/6) | Post-mortem analysis of temporal lobe in ASD children and controls, miRNA expression performed using Taqman assay | miR-146a | N/A |
| Yu et al. (2018) [ | 43 (20/23) | Serum samples, quantitative reverse transcription-PCR to examine miRNAs | miR-486-3p, miR-557 | N/A |
| Williams et al. (2018) [ | 128 (48/80) * | Blood samples from 48 ASD and 80 parents | miR-873-5p | N/A |
MicroRNAs in atopic dermatitis (*control cohort represented by patients with early-stage mycosis fungoides (MF1)).
| Study | Design | Findings | ||
|---|---|---|---|---|
| Up-Regulated miRNA | Down-Regulated miRNA | |||
| Sonkoly et al. (2010) [ | 47 (18/29) | Skin samples | miR-155 | |
| Lv et al. (2014) [ | 58 (30/28) | Serum and urine samples | miR-203, miR-483-5p (serum) | miR-203 (urine) |
| Ralfkiaer et al. (2014) [ | 75 (20/55) * | Skin samples | miR-149, miR-Plus-C1070, miR-205, miR-141, miR-23b, miR-221, miR-27b, miR-203, miR-7b, miR-19b, miR-27a, miR-455-3p, miR-200a, miR-211, miR-23a, miR-214 | miR-181a, miR-342-5p, miR-766, miR-7i, miR-186, miR-342-3p, miR-664, miR-425, miR-9, miR-331-3p, miR-146b-5p, miR-10a, miR-663, miR-937, miR-361-3p, miR-605, miR-146a, miR-940, miR-150, miR-1913, miR-155, miR-302c |
| Rebane et al. (2014) [ | 18 (9/9) | Skin samples | miR-146a | |
| Ma et al. (2015) [ | 64 (33/31) | Skin samples | miR-155 | |
| Ding et al. (2016) [ | 22 (14/8) | Skin samples | miR-148b, miR-152, miR-324 | |
| Yang et al. (2017) [ | 37 (37/0) | Skin samples | miR-124 | |
Figure 2Validated targets for miR-146a and miR-155.