Literature DB >> 30638536

STD NMR as a Technique for Ligand Screening and Structural Studies.

Samuel Walpole1, Serena Monaco1, Ridvan Nepravishta1, Jesus Angulo2.   

Abstract

STD NMR is a powerful ligand-based tool for screening small molecules and low molecular weight fragments for their interaction with a given macromolecule. Such information is invaluable both in the drug discovery sector and in understanding fundamental biological interactions. Recently, powerful methods have been developed to extract a greater wealth of information from the STD NMR experiment, including ligand binding epitopes, dissociation constant determination, and mapping of binding site properties. Herein we describe these STD NMR experiments, giving practical examples for each approach, and highlight the important parameters and common pitfalls that must be considered for a successful experiment.
© 2019 Elsevier Inc. All rights reserved.

Keywords:  Binding epitope mapping; DEEP-STD NMR; Ligand screening; Protein–ligand interactions; STD NMR; Saturation transfer difference NMR

Mesh:

Substances:

Year:  2018        PMID: 30638536     DOI: 10.1016/bs.mie.2018.08.018

Source DB:  PubMed          Journal:  Methods Enzymol        ISSN: 0076-6879            Impact factor:   1.600


  8 in total

1.  Ligand-observed NMR techniques to probe RNA-small molecule interactions.

Authors:  David R Calabrese; Colleen M Connelly; John S Schneekloth
Journal:  Methods Enzymol       Date:  2019-06-06       Impact factor: 1.600

Review 2.  AlphaFold 2 and NMR Spectroscopy: Partners to Understand Protein Structure, Dynamics and Function.

Authors:  Douglas V Laurents
Journal:  Front Mol Biosci       Date:  2022-05-17

Review 3.  Applications of Solution NMR in Drug Discovery.

Authors:  Li Shi; Naixia Zhang
Journal:  Molecules       Date:  2021-01-22       Impact factor: 4.411

4.  A Lead-Based Fragment Library Screening of the Glycosyltransferase WaaG from Escherichia coli.

Authors:  Federico Riu; Alessandro Ruda; Olof Engström; Claudio Muheim; Hani Mobarak; Jonas Ståhle; Paul Kosma; Antonio Carta; Daniel O Daley; Göran Widmalm
Journal:  Pharmaceuticals (Basel)       Date:  2022-02-09

5.  The pathogenic R5L mutation disrupts formation of Tau complexes on the microtubule by altering local N-terminal structure.

Authors:  Alisa Cario; Adriana Savastano; Neil B Wood; Zhu Liu; Michael J Previs; Adam G Hendricks; Markus Zweckstetter; Christopher L Berger
Journal:  Proc Natl Acad Sci U S A       Date:  2022-02-15       Impact factor: 12.779

6.  Characterizing the interaction between methyl ferulate and human serum albumin by saturation transfer difference NMR.

Authors:  Wenjing Wang; Qiaomei Sun; Na Gan; Yuanming Zhai; Hongzhao Xiang; Hui Li
Journal:  RSC Adv       Date:  2020-09-07       Impact factor: 4.036

Review 7.  Targeting NRF2 to treat cancer.

Authors:  Jared Sivinski; Donna D Zhang; Eli Chapman
Journal:  Semin Cancer Biol       Date:  2021-06-05       Impact factor: 15.707

Review 8.  NMR Spectroscopy of supramolecular chemistry on protein surfaces.

Authors:  Peter Bayer; Anja Matena; Christine Beuck
Journal:  Beilstein J Org Chem       Date:  2020-10-09       Impact factor: 2.883

  8 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.