Literature DB >> 30636407

Virtual Calibration Quantitative Mass Spectrometry Imaging for Accurately Mapping Analytes across Heterogenous Biotissue.

Xiaowei Song1, Jiuming He1, Xuechao Pang1, Jin Zhang1, Chenglong Sun1, Luojiao Huang1, Chao Li1, Qingce Zang1, Xin Li1, Zhigang Luo1, Ruiping Zhang1, Ping Xie1, Xiaoyu Liu1, Yan Li1, Xiaoguang Chen1, Zeper Abliz1,2.   

Abstract

It is highly challenging to quantitatively map multiple analytes in biotissues without specific chemical labeling. Quantitative mass spectrometry imaging (QMSI) has this potential but still poses technical issues for its variant ionization efficiency across a complicated, heterogeneous biomatrices. Herein, a self-developed air-flow-assisted desorption electrospray ionization (AFADESI) is introduced to present a proof of concept method, virtual calibration (VC) QMSI. This method screens and utilizes analyte response-related endogenous metabolite ions from each mass spectrum as native internal standards (IS). Through machine-learning-based regression and clustering, tissue-specific ionization variation can be automatically recognized, predicted, and normalized region by region or pixel by pixel. Therefore, the quantity of analytes can be accurately mapped across highly structural biosamples including whole body, kidney, brain, tumor, etc. VC-QMSI has the advantages of simple sample preparation without laborious isotopic IS synthesis, extrapolation for those unknown tissues or regions without previous investigation, and automatic spatial recognition without histological guidance. This strategy is suitable for mass spectrometry imaging using a variety of in situ ionization techniques. It is believed that VC-QMSI has wide applicability for drug candidate's discovery, molecular mechanism elucidation, biomarker validation, and clinical diagnosis.

Entities:  

Year:  2019        PMID: 30636407     DOI: 10.1021/acs.analchem.8b04762

Source DB:  PubMed          Journal:  Anal Chem        ISSN: 0003-2700            Impact factor:   6.986


  9 in total

Review 1.  Lipids and cancer: Emerging roles in pathogenesis, diagnosis and therapeutic intervention.

Authors:  Lisa M Butler; Ylenia Perone; Jonas Dehairs; Leslie E Lupien; Vincent de Laat; Ali Talebi; Massimo Loda; William B Kinlaw; Johannes V Swinnen
Journal:  Adv Drug Deliv Rev       Date:  2020-07-23       Impact factor: 15.470

Review 2.  Spatially resolved absolute quantitation in thin tissue by mass spectrometry.

Authors:  Vilmos Kertesz; John F Cahill
Journal:  Anal Bioanal Chem       Date:  2021-04       Impact factor: 4.142

3.  Quantitative Imprint Mass Spectrometry Imaging of Endogenous Ceramides in Rat Brain Tissue with Kinetic Calibration.

Authors:  Qian Wu; Stanislav S Rubakhin; Jonathan V Sweedler
Journal:  Anal Chem       Date:  2020-04-16       Impact factor: 6.986

4.  Mass spectrometry imaging: new eyes on natural products for drug research and development.

Authors:  Jin-Jun Hou; Zi-Jia Zhang; Wen-Yong Wu; Qing-Qing He; Teng-Qian Zhang; Ya-Wen Liu; Zhao-Jun Wang; Lei Gao; Hua-Li Long; Min Lei; Wan-Ying Wu; De-An Guo
Journal:  Acta Pharmacol Sin       Date:  2022-10-13       Impact factor: 7.169

Review 5.  MALDI-MSI Towards Multimodal Imaging: Challenges and Perspectives.

Authors:  Michael Tuck; Florent Grélard; Landry Blanc; Nicolas Desbenoit
Journal:  Front Chem       Date:  2022-05-09       Impact factor: 5.545

6.  Ratiometric Mass Spectrometry Imaging for Stain-Free Delineation of Ischemic Tissue and Spatial Profiling of Ischemia-Related Molecular Signatures.

Authors:  Zixuan Wang; Ran Yang; Yaxin Zhang; Xiangyi Hui; Liuyan Yan; Ruiping Zhang; Xin Li; Zeper Abliz
Journal:  Front Chem       Date:  2021-12-21       Impact factor: 5.221

7.  Cholesterol sulfate alleviates ulcerative colitis by promoting cholesterol biosynthesis in colonic epithelial cells.

Authors:  Dongke Xu; Ruijun Ma; Yi Ju; Xiaowei Song; Baolin Niu; Wenting Hong; Rong Wang; Qin Yang; Zhi Zhao; Yuchen Zhang; Yufan Zheng; Qianming Bai; Mingfang Lv; Ning Sun; Xiaobo Li
Journal:  Nat Commun       Date:  2022-07-30       Impact factor: 17.694

8.  Evaluation of the tumor-targeting efficiency and intratumor heterogeneity of anticancer drugs using quantitative mass spectrometry imaging.

Authors:  Jin Zhang; Qianqian Du; Xiaowei Song; Shanshan Gao; Xuechao Pang; Yan Li; Ruiping Zhang; Zeper Abliz; Jiuming He
Journal:  Theranostics       Date:  2020-02-03       Impact factor: 11.556

9.  The local-balanced model for improved machine learning outcomes on mass spectrometry data sets and other instrumental data.

Authors:  Heather Desaire; Milani Wijeweera Patabandige; David Hua
Journal:  Anal Bioanal Chem       Date:  2021-02-13       Impact factor: 4.142

  9 in total

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