Literature DB >> 30631074

Shifts in the selectivity filter dynamics cause modal gating in K+ channels.

Shehrazade Jekhmane1, João Medeiros-Silva1, Jing Li2, Felix Kümmerer1, Christoph Müller-Hermes1, Marc Baldus1, Benoît Roux2, Markus Weingarth3.   

Abstract

Spontaneous activity shifts at constant experimental conditions represent a widespread regulatory mechanism in ion channels. The molecular origins of these modal gating shifts are poorly understood. In the K+ channel KcsA, a multitude of fast activity shifts that emulate the native modal gating behaviour can be triggered by point-mutations in the hydrogen bonding network that controls the selectivity filter. Using solid-state NMR and molecular dynamics simulations in a variety of KcsA mutants, here we show that modal gating shifts in K+ channels are associated with important changes in the channel dynamics that strongly perturb the selectivity filter equilibrium conformation. Furthermore, our study reveals a drastically different motional and conformational selectivity filter landscape in a mutant that mimics voltage-gated K+ channels, which provides a foundation for an improved understanding of eukaryotic K+ channels. Altogether, our results provide a high-resolution perspective on some of the complex functional behaviour of K+ channels.

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Year:  2019        PMID: 30631074      PMCID: PMC6328603          DOI: 10.1038/s41467-018-07973-6

Source DB:  PubMed          Journal:  Nat Commun        ISSN: 2041-1723            Impact factor:   14.919


  59 in total

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Journal:  Nat Struct Mol Biol       Date:  2008-05-18       Impact factor: 15.369

3.  Mechanism for selectivity-inactivation coupling in KcsA potassium channels.

Authors:  Wayland W L Cheng; Jason G McCoy; Ameer N Thompson; Colin G Nichols; Crina M Nimigean
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Journal:  Solid State Nucl Magn Reson       Date:  2017-03-18       Impact factor: 2.293

5.  Altered prevalence of gating modes in neurotransmitter inhibition of N-type calcium channels.

Authors:  A H Delcour; R W Tsien
Journal:  Science       Date:  1993-02-12       Impact factor: 47.728

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Journal:  Cell       Date:  2017-04-20       Impact factor: 41.582

7.  Chemical substitutions in the selectivity filter of potassium channels do not rule out constricted-like conformations for C-type inactivation.

Authors:  Jing Li; Jared Ostmeyer; Eliot Boulanger; Huan Rui; Eduardo Perozo; Benoît Roux
Journal:  Proc Natl Acad Sci U S A       Date:  2017-10-02       Impact factor: 11.205

8.  Structure of outer membrane protein G in lipid bilayers.

Authors:  Joren S Retel; Andrew J Nieuwkoop; Matthias Hiller; Victoria A Higman; Emeline Barbet-Massin; Jan Stanek; Loren B Andreas; W Trent Franks; Barth-Jan van Rossum; Kutti R Vinothkumar; Lieselotte Handel; Gregorio Giuseppe de Palma; Benjamin Bardiaux; Guido Pintacuda; Lyndon Emsley; Werner Kühlbrandt; Hartmut Oschkinat
Journal:  Nat Commun       Date:  2017-12-12       Impact factor: 14.919

9.  Supramolecular Organization and Functional Implications of K+  Channel Clusters in Membranes.

Authors:  Koen M Visscher; João Medeiros-Silva; Deni Mance; João P G L M Rodrigues; Mark Daniëls; Alexandre M J J Bonvin; Marc Baldus; Markus Weingarth
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Authors:  Jared Ostmeyer; Sudha Chakrapani; Albert C Pan; Eduardo Perozo; Benoît Roux
Journal:  Nature       Date:  2013-07-28       Impact factor: 49.962

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  25 in total

1.  Inactivation in the potassium channel KcsA.

Authors:  Yunyao Xu; Ann E McDermott
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Authors:  Martin D Gelenter; Aurelio J Dregni; Mei Hong
Journal:  J Phys Chem B       Date:  2020-08-06       Impact factor: 2.991

3.  IR Spectroscopy Can Reveal the Mechanism of K+ Transport in Ion Channels.

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5.  Computational methods and theory for ion channel research.

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Review 6.  1H-Detected Biomolecular NMR under Fast Magic-Angle Spinning.

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7.  Ion behavior in the selectivity filter of HCN1 channels.

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Review 8.  From Angstroms to Nanometers: Measuring Interatomic Distances by Solid-State NMR.

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9.  Proton-Detected Solid-State NMR of the Cell-Free Synthesized α-Helical Transmembrane Protein NS4B from Hepatitis C Virus.

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Review 10.  Towards the Native Binding Modes of Antibiotics that Target Lipid II.

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