Literature DB >> 3062578

The unusually long amino acid acceptor stem of Escherichia coli selenocysteine tRNA results from abnormal cleavage by RNase P.

U Burkard1, D Söll.   

Abstract

The nucleotide sequence of the gene encoding the Escherichia coli selenocysteine tRNA (tRNA(SeCys] predicts an unusually long acceptor stem of 8 base pairs (one more than other tRNAs). Here we show by in vivo experiments (Northern blots, primer extension analysis) and by in vitro RNA processing studies that E. coli tRNA(SeCys) does contain this additional basepair, and that its formation results from abnormal cleavage by RNase P.

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Year:  1988        PMID： 3062578      PMCID： PMC339093          DOI： 10.1093/nar/16.24.11617

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN： 0305-1048            Impact factor:   16.971


  11 in total

1.  The RNA component of the Bacillus subtilis RNase P. Sequence, activity, and partial secondary structure.

Authors:  C Reich; K J Gardiner; G J Olsen; B Pace; T L Marsh; N R Pace
Journal:  J Biol Chem       Date:  1986-06-15       Impact factor: 5.157

2.  Structural requirements for processing of synthetic tRNAHis precursors by the catalytic RNA component of RNase P.

Authors:  C J Green; B S Vold
Journal:  J Biol Chem       Date:  1988-01-15       Impact factor: 5.157

3.  Gene for a novel tRNA species that accepts L-serine and cotranslationally inserts selenocysteine.

Authors:  W Leinfelder; E Zehelein; M A Mandrand-Berthelot; A Böck
Journal:  Nature       Date:  1988-02-25       Impact factor: 49.962

4.  Genetic code: enter a new amino acid.

Authors:  D Söll
Journal:  Nature       Date:  1988-02-25       Impact factor: 49.962

5.  The RNA moiety of ribonuclease P is the catalytic subunit of the enzyme.

Authors:  C Guerrier-Takada; K Gardiner; T Marsh; N Pace; S Altman
Journal:  Cell       Date:  1983-12       Impact factor: 41.582

6.  Cotranslational insertion of selenocysteine into formate dehydrogenase from Escherichia coli directed by a UGA codon.

Authors:  F Zinoni; A Birkmann; W Leinfelder; A Böck
Journal:  Proc Natl Acad Sci U S A       Date:  1987-05       Impact factor: 11.205

7.  The additional guanylate at the 5' terminus of Escherichia coli tRNAHis is the result of unusual processing by RNase P.

Authors:  O Orellana; L Cooley; D Söll
Journal:  Mol Cell Biol       Date:  1986-02       Impact factor: 4.272

8.  Processing of histidine transfer RNA precursors. Abnormal cleavage site for RNase P.

Authors:  U Burkard; I Willis; D Söll
Journal:  J Biol Chem       Date:  1988-02-15       Impact factor: 5.157

9.  Identification of clones carrying an E. coli tRNAPhe gene by suppression of phenylalanyl-tRNA synthetase thermosensitive mutants.

Authors:  J Caillet; J A Plumbridge; M Springer; J Vacher; C Delamarche; R H Buckingham; M Grunberg-Manago
Journal:  Nucleic Acids Res       Date:  1983-02-11       Impact factor: 16.971

10.  Two RNA species co-purify with RNase P from the fission yeast Schizosaccharomyces pombe.

Authors:  G Krupp; B Cherayil; D Frendewey; S Nishikawa; D Söll
Journal:  EMBO J       Date:  1986-07       Impact factor: 11.598
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  14 in total

1.  The acceptor stem in pre-tRNAs determines the cleavage specificity of RNase P.

Authors:  P S Holm; G Krupp
Journal:  Nucleic Acids Res       Date:  1992-02-11       Impact factor: 16.971

2.  The kinetics and specificity of cleavage by RNase P is mainly dependent on the structure of the amino acid acceptor stem.

Authors:  L A Kirsebom; S G Svärd
Journal:  Nucleic Acids Res       Date:  1992-02-11       Impact factor: 16.971

3.  In vitro processing of transcripts containing novel tRNA-like sequences ('t-elements') encoded by wheat mitochondrial DNA.

Authors:  P J Hanic-Joyce; D F Spencer; M W Gray
Journal:  Plant Mol Biol       Date:  1990-10       Impact factor: 4.076

4.  Protein-only RNase P function in Escherichia coli: viability, processing defects and differences between PRORP isoenzymes.

Authors:  Markus Gößringer; Marcus Lechner; Nadia Brillante; Christoph Weber; Walter Rossmanith; Roland K Hartmann
Journal:  Nucleic Acids Res       Date:  2017-07-07       Impact factor: 16.971

5.  Interaction of RNase P from Escherichia coli with pseudoknotted structures in viral RNAs.

Authors:  R M Mans; C Guerrier-Takada; S Altman; C W Pleij
Journal:  Nucleic Acids Res       Date:  1990-06-25       Impact factor: 16.971

6.  The long D-stem of the selenocysteine tRNA provides resilience at the expense of maximal function.

Authors:  Tetsu M Ishii; Natalia Kotlova; Franck Tapsoba; Sergey V Steinberg
Journal:  J Biol Chem       Date:  2013-03-22       Impact factor: 5.157

7.  Human tRNA(Sec) associates with HeLa membranes, cell lipid liposomes, and synthetic lipid bilayers.

Authors:  Teresa Janas; Tadeusz Janas; Michael Yarus
Journal:  RNA       Date:  2012-10-24       Impact factor: 4.942

Review 8.  Distinct genetic code expansion strategies for selenocysteine and pyrrolysine are reflected in different aminoacyl-tRNA formation systems.

Authors:  Jing Yuan; Patrick O'Donoghue; Alex Ambrogelly; Sarath Gundllapalli; R Lynn Sherrer; Sotiria Palioura; Miljan Simonović; Dieter Söll
Journal:  FEBS Lett       Date:  2010-01-21       Impact factor: 4.124

9.  Expression and operon structure of the sel genes of Escherichia coli and identification of a third selenium-containing formate dehydrogenase isoenzyme.

Authors:  G Sawers; J Heider; E Zehelein; A Böck
Journal:  J Bacteriol       Date:  1991-08       Impact factor: 3.490

10.  The selenocysteine-inserting opal suppressor serine tRNA from E. coli is highly unusual in structure and modification.

Authors:  A Schön; A Böck; G Ott; M Sprinzl; D Söll
Journal:  Nucleic Acids Res       Date:  1989-09-25       Impact factor: 16.971
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