Literature DB >> 3062369

Gene dosage alteration of L2 ribosomal protein genes in Saccharomyces cerevisiae: effects on ribosome synthesis.

A Lucioli1, C Presutti, S Ciafrè, E Caffarelli, P Fragapane, I Bozzoni.   

Abstract

In Saccharomyces cerevisiae, the genes coding for the ribosomal protein L2 are present in two copies per haploid genome. The two copies, which encode proteins differing in only a few amino acids, contribute unequally to the L2 mRNA pool: the L2A copy makes 72% of the mRNA, while the L2B copy makes only 28%. Disruption of the L2B gene (delta B strain) did not lead to any phenotypic alteration, whereas the inactivation of the L2A copy (delta A strain) produced a slow-growth phenotype associated with decreased accumulation of 60S subunits and ribosomes. No intergenic compensation occurred at the transcriptional level in the disrupted strains; in fact, delta A strains contained reduced levels of L2 mRNA, whereas delta B strains had almost normal levels. The wild-type phenotype was restored in the delta A strains by transformation with extra copies of the intact L2A or L2B gene. As already shown for other duplicated genes (Kim and Warner, J. Mol. Biol. 165:79-89, 1983; Leeret al., Curr. Genet. 9:273-277, 1985), the difference in expression of the two gene copies could be accounted for via differential transcription activity. Sequence comparison of the rpL2 promoter regions has shown the presence of canonical HOMOL1 boxes which are slightly different in the two genes.

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Year:  1988        PMID: 3062369      PMCID: PMC365572          DOI: 10.1128/mcb.8.11.4792-4798.1988

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  23 in total

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Authors:  G R Al-Atia; P Fruscoloni; M Jacobs-Lorena
Journal:  Biochemistry       Date:  1985-10-08       Impact factor: 3.162

2.  Xenopus laevis ribosomal protein genes: isolation of recombinant cDNA clones and study of the genomic organization.

Authors:  I Bozzoni; E Beccari; Z X Luo; F Amaldi
Journal:  Nucleic Acids Res       Date:  1981-03-11       Impact factor: 16.971

3.  Ribosomal protein production in normal and anucleolate Xenopus embryos: regulation at the posttranscriptional and translational levels.

Authors:  P Pierandrei-Amaldi; E Beccari; I Bozzoni; F Amaldi
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4.  Conserved sequences upstream of yeast ribosomal protein genes.

Authors:  R J Leer; M M Van Raamsdonk-Duin; W H Mager; R J Planta
Journal:  Curr Genet       Date:  1985       Impact factor: 3.886

5.  Sequencing end-labeled DNA with base-specific chemical cleavages.

Authors:  A M Maxam; W Gilbert
Journal:  Methods Enzymol       Date:  1980       Impact factor: 1.600

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Authors:  J R Warner; G Mitra; W F Schwindinger; M Studeny; H M Fried
Journal:  Mol Cell Biol       Date:  1985-06       Impact factor: 4.272

7.  Two genes for ribosomal protein 51 of Saccharomyces cerevisiae complement and contribute to the ribosomes.

Authors:  N Abovich; M Rosbash
Journal:  Mol Cell Biol       Date:  1984-09       Impact factor: 4.272

8.  The genes for fifteen ribosomal proteins of Saccharomyces cerevisiae.

Authors:  H M Fried; N J Pearson; C H Kim; J R Warner
Journal:  J Biol Chem       Date:  1981-10-10       Impact factor: 5.157

9.  A general upstream binding factor for genes of the yeast translational apparatus.

Authors:  J Huet; P Cottrelle; M Cool; M L Vignais; D Thiele; C Marck; J M Buhler; A Sentenac; P Fromageot
Journal:  EMBO J       Date:  1985-12-16       Impact factor: 11.598

10.  Nucleotide sequence of the L1 ribosomal protein gene of Xenopus laevis: remarkable sequence homology among introns.

Authors:  F Loreni; I Ruberti; I Bozzoni; P Pierandrei-Amaldi; F Amaldi
Journal:  EMBO J       Date:  1985-12-16       Impact factor: 11.598

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  18 in total

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Authors:  D M Donovan; M P Remington; D A Stewart; J C Crouse; D J Miles; N J Pearson
Journal:  Mol Cell Biol       Date:  1990-11       Impact factor: 4.272

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4.  The ABF1 factor is the transcriptional activator of the L2 ribosomal protein genes in Saccharomyces cerevisiae.

Authors:  F Della Seta; S A Ciafré; C Marck; B Santoro; C Presutti; A Sentenac; I Bozzoni
Journal:  Mol Cell Biol       Date:  1990-05       Impact factor: 4.272

5.  Disruption of single-copy genes encoding acidic ribosomal proteins in Saccharomyces cerevisiae.

Authors:  M Remacha; C Santos; J P Ballesta
Journal:  Mol Cell Biol       Date:  1990-05       Impact factor: 4.272

6.  Ribosome deficiency protects against ER stress in Saccharomyces cerevisiae.

Authors:  Kristan K Steffen; Mark A McCormick; Kim M Pham; Vivian L MacKay; Joe R Delaney; Christopher J Murakami; Matt Kaeberlein; Brian K Kennedy
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7.  Functional specificity among ribosomal proteins regulates gene expression.

Authors:  Suzanne Komili; Natalie G Farny; Frederick P Roth; Pamela A Silver
Journal:  Cell       Date:  2007-11-02       Impact factor: 41.582

8.  Ribosomal protein L35 is required for 27SB pre-rRNA processing in Saccharomyces cerevisiae.

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9.  Control of hematopoietic stem cell emergence by antagonistic functions of ribosomal protein paralogs.

Authors:  Yong Zhang; Anne-Cécile E Duc; Shuyun Rao; Xiao-Li Sun; Alison N Bilbee; Michele Rhodes; Qin Li; Dietmar J Kappes; Jennifer Rhodes; David L Wiest
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10.  rRNA maturation in yeast cells depleted of large ribosomal subunit proteins.

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Journal:  PLoS One       Date:  2009-12-11       Impact factor: 3.240

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