Literature DB >> 3897837

Saccharomyces cerevisiae coordinates accumulation of yeast ribosomal proteins by modulating mRNA splicing, translational initiation, and protein turnover.

J R Warner, G Mitra, W F Schwindinger, M Studeny, H M Fried.   

Abstract

The rate of accumulation of each ribosomal protein is carefully regulated by the yeast cell to provide the equimolar ratio necessary for the assembly of the ribosome. The mechanisms responsible for this regulation have been examined by introducing into the yeast cell extra copies of seven individual ribosomal protein genes carried on autonomously replicating plasmids. In each case studied the plasmid-borne gene was transcribed to the same degree as the genomic gene. Nevertheless, the cell maintained a balanced accumulation of ribosomal proteins, using a variety of methods other than transcription. (i) Several ribosomal proteins were synthesized in substantial excess. However, the excess ribosomal protein was rapidly degraded. (ii) The excess mRNA for two of the ribosomal protein genes was translated inefficiently. We provide evidence that this was due to inefficient initiation of translation. (iii) The transcripts derived from two of the ribosomal protein genes were spliced inefficiently, leading to an accumulation of precursor RNA. We present a model which proposes the autogenous regulation of mRNA splicing as a eucaryotic parallel of the autogenous regulation of mRNA translation in procaryotes. Finally, the accumulation of each ribosomal protein was regulated independently. In no instance did the presence of excess copies of the gene for one ribosomal protein affect the synthesis of another ribosomal protein.

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Year:  1985        PMID: 3897837      PMCID: PMC366884          DOI: 10.1128/mcb.5.6.1512-1521.1985

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  37 in total

1.  Detection of specific sequences among DNA fragments separated by gel electrophoresis.

Authors:  E M Southern
Journal:  J Mol Biol       Date:  1975-11-05       Impact factor: 5.469

2.  Ribosomal RNA synthesis in Saccharomyces cerevisiae.

Authors:  S A Udem; J R Warner
Journal:  J Mol Biol       Date:  1972-03-28       Impact factor: 5.469

3.  Identification of ten genes that control ribosome formation in yeast.

Authors:  L H Hartwell; C S McLaughlin; J R Warner
Journal:  Mol Gen Genet       Date:  1970

4.  The assembly of ribosomes in yeast.

Authors:  J R Warner
Journal:  J Biol Chem       Date:  1971-01-25       Impact factor: 5.157

Review 5.  Regulation of the synthesis of ribosomes and ribosomal components.

Authors:  M Nomura; R Gourse; G Baughman
Journal:  Annu Rev Biochem       Date:  1984       Impact factor: 23.643

Review 6.  Architecture of prokaryotic ribosomes.

Authors:  H G Wittmann
Journal:  Annu Rev Biochem       Date:  1983       Impact factor: 23.643

7.  A comparison of yeast ribosomal protein gene DNA sequences.

Authors:  J L Teem; N Abovich; N F Kaufer; W F Schwindinger; J R Warner; A Levy; J Woolford; R J Leer; M M van Raamsdonk-Duin; W H Mager
Journal:  Nucleic Acids Res       Date:  1984-11-26       Impact factor: 16.971

8.  A yeast ribosomal protein gene whose intron is in the 5' leader.

Authors:  G Mitra; J R Warner
Journal:  J Biol Chem       Date:  1984-07-25       Impact factor: 5.157

9.  Cycloheximide resistance in yeast: the gene and its protein.

Authors:  N F Käufer; H M Fried; W F Schwindinger; M Jasin; J R Warner
Journal:  Nucleic Acids Res       Date:  1983-05-25       Impact factor: 16.971

10.  The yeast MATa1 gene contains two introns.

Authors:  A M Miller
Journal:  EMBO J       Date:  1984-05       Impact factor: 11.598

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  106 in total

1.  A role for RNA metabolism in inducing the heat shock response.

Authors:  T Carlson; N Christian; J J Bonner
Journal:  Gene Expr       Date:  1999

Review 2.  Regulation of ribosome biosynthesis in Escherichia coli and Saccharomyces cerevisiae: diversity and common principles.

Authors:  M Nomura
Journal:  J Bacteriol       Date:  1999-11       Impact factor: 3.490

3.  Functional analysis of a duplicated linked pair of ribosomal protein genes in Saccharomyces cerevisiae.

Authors:  D M Donovan; M P Remington; D A Stewart; J C Crouse; D J Miles; N J Pearson
Journal:  Mol Cell Biol       Date:  1990-11       Impact factor: 4.272

4.  Complex formation by positive and negative translational regulators of GCN4.

Authors:  A M Cigan; M Foiani; E M Hannig; A G Hinnebusch
Journal:  Mol Cell Biol       Date:  1991-06       Impact factor: 4.272

5.  Importin 7 and exportin 1 link c-Myc and p53 to regulation of ribosomal biogenesis.

Authors:  Lior Golomb; Debora Rosa Bublik; Sylvia Wilder; Reinat Nevo; Vladimir Kiss; Kristina Grabusic; Sinisa Volarevic; Moshe Oren
Journal:  Mol Cell       Date:  2012-01-27       Impact factor: 17.970

6.  Small and Large Ribosomal Subunit Deficiencies Lead to Distinct Gene Expression Signatures that Reflect Cellular Growth Rate.

Authors:  Ze Cheng; Christopher Frederick Mugler; Abdurrahman Keskin; Stefanie Hodapp; Leon Yen-Lee Chan; Karsten Weis; Philipp Mertins; Aviv Regev; Marko Jovanovic; Gloria Ann Brar
Journal:  Mol Cell       Date:  2018-11-29       Impact factor: 17.970

7.  Ribosomal Protein S12e Has a Distinct Function in Cell Competition.

Authors:  Abhijit Kale; Zhejun Ji; Marianthi Kiparaki; Jorge Blanco; Gerard Rimesso; Stephane Flibotte; Nicholas E Baker
Journal:  Dev Cell       Date:  2018-01-08       Impact factor: 12.270

8.  Study of multiple fibrillarin mRNAs reveals that 3' end formation in Schizosaccharomyces pombe is sensitive to cold shock.

Authors:  J P Girard; J Feliu; M Caizergues-Ferrer; B Lapeyre
Journal:  Nucleic Acids Res       Date:  1993-04-25       Impact factor: 16.971

9.  Transcript profiling demonstrates absence of dosage compensation in Arabidopsis following loss of a single RPL23a paralog.

Authors:  Rory F Degenhardt; Peta C Bonham-Smith
Journal:  Planta       Date:  2008-06-20       Impact factor: 4.116

10.  Effects of progressive depletion of TCM1 or CYH2 mRNA on Saccharomyces cerevisiae ribosomal protein accumulation.

Authors:  H G Nam; H M Fried
Journal:  Mol Cell Biol       Date:  1986-05       Impact factor: 4.272

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