Literature DB >> 30621423

Understanding non-covalent interactions in larger molecular complexes from first principles.

Yasmine S Al-Hamdani1, Alexandre Tkatchenko1.   

Abstract

Non-covalent interactions pervade all matter and play a fundamental role in layered materials, biological systems, and large molecular complexes. Despite this, our accumulated understanding of non-covalent interactions to date has been mainly developed in the tens-of-atoms molecular regime. This falls considerably short of the scales at which we would like to understand energy trends, structural properties, and temperature dependencies in materials where non-covalent interactions have an appreciable role. However, as more reference information is obtained beyond moderately sized molecular systems, our understanding is improving and we stand to gain pertinent insights by tackling more complex systems, such as supramolecular complexes, molecular crystals, and other soft materials. In addition, accurate reference information is needed to provide the drive for extending the predictive power of more efficient workhorse methods, such as density functional approximations that also approximate van der Waals dispersion interactions. In this perspective, we discuss the first-principles approaches that have been used to obtain reference interaction energies for beyond modestly sized molecular complexes. The methods include quantum Monte Carlo, symmetry-adapted perturbation theory, non-canonical coupled cluster theory, and approaches based on the random-phase approximation. By considering the approximations that underpin each method, the most accurate theoretical references for supramolecular complexes and molecular crystals to date are ascertained. With these, we also assess a handful of widely used exchange-correlation functionals in density functional theory. The discussion culminates in a framework for putting into perspective the accuracy of high-level wavefunction-based methods and identifying future challenges.

Entities:  

Year:  2019        PMID: 30621423     DOI: 10.1063/1.5075487

Source DB:  PubMed          Journal:  J Chem Phys        ISSN: 0021-9606            Impact factor:   3.488


  9 in total

1.  External Electric Field Effect on the Strength of σ-Hole Interactions: A Theoretical Perspective in Like⋯Like Carbon-Containing Complexes.

Authors:  Mahmoud A A Ibrahim; Nayra A M Moussa; Afnan A K Kamel; Mohammed N I Shehata; Muhammad Naeem Ahmed; Fouad Taha; Mohammed A S Abourehab; Ahmed M Shawky; Eslam B Elkaeed; Mahmoud E S Soliman
Journal:  Molecules       Date:  2022-05-05       Impact factor: 4.927

2.  Accurate Reduced-Cost CCSD(T) Energies: Parallel Implementation, Benchmarks, and Large-Scale Applications.

Authors:  László Gyevi-Nagy; Mihály Kállay; Péter R Nagy
Journal:  J Chem Theory Comput       Date:  2021-01-05       Impact factor: 6.006

3.  Conformational stability and structural analysis of methanethiol clusters: a revisit.

Authors:  Manish Kumar Tripathi; Venkatnarayan Ramanathan
Journal:  RSC Adv       Date:  2021-09-01       Impact factor: 4.036

4.  Behavior of counterpoise correction in many-body molecular clusters of organic compounds: Hartree-Fock interaction energy perspective.

Authors:  Anh L P Nguyen; Ekaterina I Izgorodina
Journal:  J Comput Chem       Date:  2022-02-08       Impact factor: 3.672

5.  Theoretical Study of the Structure and Binding Energies of Dimers of Zn(II)-Porphyrin Derivatives.

Authors:  Sule Atahan-Evrenk
Journal:  J Phys Chem A       Date:  2022-10-04       Impact factor: 2.944

6.  Interactions between large molecules pose a puzzle for reference quantum mechanical methods.

Authors:  Yasmine S Al-Hamdani; Péter R Nagy; Andrea Zen; Dennis Barton; Mihály Kállay; Jan Gerit Brandenburg; Alexandre Tkatchenko
Journal:  Nat Commun       Date:  2021-06-24       Impact factor: 14.919

Review 7.  Computational Tools to Rationalize and Predict the Self-Assembly Behavior of Supramolecular Gels.

Authors:  Ruben Van Lommel; Wim M De Borggraeve; Frank De Proft; Mercedes Alonso
Journal:  Gels       Date:  2021-07-09

8.  On the Potentiality of X-T-X3 Compounds (T = C, Si, and Ge, and X = F, Cl, and Br) as Tetrel- and Halogen-Bond Donors.

Authors:  Mahmoud A A Ibrahim; Nayra A M Moussa; Mahmoud E S Soliman; Mahmoud F Moustafa; Jabir H Al-Fahemi; H R Abd El-Mageed
Journal:  ACS Omega       Date:  2021-07-16

9.  DFT-D4 Insight into the Inclusion of Amphetamine and Methamphetamine in Cucurbit[7]uril: Energetic, Structural and Biosensing Properties.

Authors:  Abdelkarim Litim; Youghourta Belhocine; Tahar Benlecheb; Monira Galal Ghoniem; Zoubir Kabouche; Fatima Adam Mohamed Ali; Babiker Yagoub Abdulkhair; Mahamadou Seydou; Seyfeddine Rahali
Journal:  Molecules       Date:  2021-12-10       Impact factor: 4.411

  9 in total

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