| Literature DB >> 30613146 |
Yan-Qiong Wu1, Shi-Yan Cheng2, Xian-Cheng Xu1, Wen-Cui Li3.
Abstract
INTRODUCTION: Previous epidemiological studies have suggested that CD14 rs2569190 C>T polymorphism plays an important role in ischemic stroke (IS) risk, but the results were inconsistent. Therefore, we conducted a meta-analysis to determine the association between CD14 rs2569190 C>T polymorphism and IS susceptibility.Entities:
Keywords: CD14; ischemic stroke; polymorphism
Year: 2018 PMID: 30613146 PMCID: PMC6306072 DOI: 10.2147/NDT.S185313
Source DB: PubMed Journal: Neuropsychiatr Dis Treat ISSN: 1176-6328 Impact factor: 2.570
Scale for quality evaluation
| Criteria | Score |
|---|---|
|
| |
| Representativeness of cases | |
| Time, consecutive/randomly cases with clearly defined sampling frame | 2 |
| Without time or consecutive/randomly case, without clearly defined sampling frame | 1 |
| Not described | 0 |
| Source of controls | |
| Population based | 2 |
| Hospital based or Healthy based | 1 |
| Not described | 0 |
| Hardy–Weinberg equilibrium in controls | |
| Hardy–Weinberg equilibrium | 2 |
| Hardy–Weinberg disequilibrium | 1 |
| Not available | 0 |
| Genotyping examination | |
| Genotyping done under “blinded” condition and repeated again | 2 |
| Genotyping done under “blinded” condition or repeated again | 1 |
| Unblinded done or not mentioned and unrepeated | 0 |
| Subjects | |
| Number ≥500 | 1 |
| Number <500 | 0 |
| Association assessment | |
| Assess association between genotypes and ischemic stroke with appropriate statistics and adjustment for confounders | 2 |
| Assess association between genotypes and ischemic stroke with appropriate statistics and without adjustment for confounders | 1 |
| Inappropriate statistics used | 0 |
Figure 1Flow diagram of the study selection process.
Characteristics of case–control studies on CD14 rs2569190 C>T polymorphism and ischemic stroke risk
| Study | Year | Country | Ethnicity | Control design | Genotype method | Case | Control | Genotype distribution
| MAF | NOS evaluation | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Case
| Control
| |||||||||||||||
| CC | CT | TT | CC | CT | TT | |||||||||||
|
| ||||||||||||||||
| Ito et al | 2000 | Japan | Asian | PB | PCR-RFLP | 235 | 309 | 53 | 125 | 57 | 71 | 155 | 83 | 0.93 | 0.52 | 8 |
| Grau et al | 2001 | Germany | Caucasian | HB | PCR-RFLP | 20 | 21 | 5 | 12 | 3 | 6 | 9 | 6 | 0.51 | 0.50 | 6 |
| Zee et al | 2002 | US | Caucasian | PB | PCR-RFLP | 279 | 279 | 75 | 132 | 72 | 62 | 146 | 71 | 0.43 | 0.52 | 10 |
| Lichy et al | 2002 | Germany | Caucasian | PB | PCR-RFLP | 151 | 149 | 37 | 75 | 39 | 73 | 71 | 35 | 0.02 | 0.39 | 7 |
| Park et al | 2006 | Korea | Asian | PB | PCR-RFLP | 125 | 125 | 19 | 79 | 27 | 29 | 72 | 24 | 0.09 | 0.48 | 9 |
| Lalouschek et al | 2006 | USA | Caucasian | PB | PCR-RFLP | 404 | 415 | 113 | 187 | 104 | 123 | 200 | 92 | 0.53 | 0.46 | 8 |
| Kis et al | 2007 | Hungary | Caucasian | HB | PCR-FLOH | 59 | 52 | 20 | 24 | 15 | 15 | 20 | 17 | 0.10 | 0.52 | 7 |
| Lin et al | 2008 | China | Asian | HB | PCR-RFLP | 450 | 450 | 75 | 213 | 162 | 61 | 244 | 145 | 0.01 | 0.59 | 6 |
| Banerjee et al | 2008 | India | Asian | HB | PCR-RFLP | 112 | 212 | 27 | 50 | 35 | 36 | 112 | 64 | 0.27 | 0.57 | 6 |
| Das et al | 2017 | India | Asian | HB | PCR-RFLP | 700 | 700 | 171 | 394 | 135 | 174 | 391 | 135 | <0.01 | 0.47 | 7 |
Note: HWE is control.
Abbreviations: HB, hospital or healthy based; HWE, Hardy–Weinberg equilibrium; MAF, minor allele frequency; NOS, Newcastle–Ottawa scale; PB, population based; PCR-FLOH, PCR fluorescent-labeled oligonucleotide hybridization; PCR-RFLP, PCR-restriction fragment length polymorphism.
Summary of ORs and 95% CI of CD14 rs2569190 C>T polymorphism and ischemic stroke risk
| N | T vs C
| CT vs CC
| TT vs CC
| CT + TT vs CC
| TT vs CC + CT
| ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| OR | 95% CI | OR | 95% CI | OR | 95% CI | OR | 95% CI | OR | 95% CI | ||||||||||||
|
| |||||||||||||||||||||
| Total | 10 | 1.03 | 0.96–1.12 | 0.41 | 27.8 | 1.01 | 0.81–1.25 | 0.95 | 51.9 | 1.04 | 0.89–1.22 | 0.62 | 25.1 | 1.02 | 0.84–1.25 | 0.82 | 51.4 | 1.07 | 0.95–1.22 | 0.28 | 0 |
| HWE, yes | 7 | 1.00 | 0.90–1.11 | 0.98 | 0 | 0.96 | 0.79–1.15 | 0.64 | 19.5 | 0.99 | 0.80–1.23 | 0.93 | 0 | 0.97 | 0.81–1.16 | 0.73 | 15.3 | 1.03 | 0.86–1.23 | 0.77 | 0 |
| HWE, no | 3 | 1.13 | 0.90–1.41 | 0.28 | 71.5 | 1.11 | 0.67–1.84 | 0.67 | 81.6 | 1.19 | 0.77–1.84 | 0.43 | 67.4 | 1.16 | 0.72–1.87 | 0.54 | 81.6 | 1.12 | 0.94–1.34 | 0.21 | 0 |
| Ethnicity | |||||||||||||||||||||
| Asian | 5 | 1.01 | 0.91–1.11 | 0.92 | 0 | 0.94 | 0.71–1.23 | 0.65 | 50.4 | 0.97 | 0.79–1.19 | 0.80 | 0 | 0.96 | 0.82–1.14 | 0.66 | 37.8 | 1.05 | 0.90–1.23 | 0.56 | 0 |
| Caucasian | 5 | 1.07 | 0.85–1.35 | 0.56 | 52.8 | 1.12 | 0.75–1.67 | 0.58 | 59.9 | 1.13 | 0.75–1.70 | 0.57 | 50.2 | 1.12 | 0.75–1.66 | 0.58 | 63.9 | 1.12 | 0.90–1.38 | 0.30 | 0 |
| Control design | |||||||||||||||||||||
| PB | 5 | 1.11 | 0.93–1.32 | 0.23 | 56.6 | 1.18 | 0.84–1.65 | 0.33 | 64.2 | 1.22 | 0.88–1.70 | 0.24 | 50.0 | 1.20 | 0.87–1.67 | 0.27 | 67.0 | 1.10 | 0.92–1.32 | 0.30 | 0 |
| HB | 5 | 0.98 | 0.88–1.09 | 0.75 | 0 | 0.89 | 0.73–1.07 | 0.22 | 17.7 | 0.91 | 0.73–1.15 | 0.44 | 0 | 0.99 | 0.75–1.08 | 0.27 | 0 | 1.05 | 0.88–1.25 | 0.60 | 0 |
| Subjects | |||||||||||||||||||||
| >500 | 5 | 1.01 | 0.93–1.10 | 0.83 | 0 | 0.93 | 0.80–1.08 | 0.36 | 7.4 | 1.00 | 0.82–1.19 | 0.97 | 0 | 0.96 | 0.83–1.11 | 0.56 | 0 | 1.07 | 0.93–1.23 | 0.36 | 0 |
| <500 | 5 | 1.18 | 0.81–1.44 | 0.58 | 57.1 | 1.23 | 0.71–2.14 | 0.36 | 63.8 | 1.14 | 0.65–2.01 | 0.64 | 55.1 | 1.19 | 0.70–2.05 | 0.52 | 67.1 | 1.09 | 0.82–1.44 | 0.56 | 0 |
| NOS evaluation | |||||||||||||||||||||
| NOS ≥8 | 4 | 1.03 | 0.92–1.16 | 0.61 | 0 | 1.00 | 0.82–1.23 | 0.98 | 31.9 | 1.07 | 0.84–1.36 | 0.59 | 8.3 | 1.02 | 0.84–1.25 | 0.81 | 32.0 | 1.06 | 0.87–1.29 | 0.56 | 0 |
| NOS <8 | 6 | 1.04 | 0.88–1.22 | 0.66 | 48.0 | 1.00 | 0.69–1.44 | 0.98 | 65.0 | 1.01 | 0.87–1.17 | 0.93 | 43.3 | 1.00 | 0.71–1.42 | 0.98 | 64.5 | 1.08 | 0.92–1.27 | 0.36 | 5.0 |
Notes:
Numbers of comparisons. I2 is for heterogeneity test.
Abbreviations: HB, hospital or healthy based; HWE, Hardy–Weinberg equilibrium; NOS, Newcastle–Ottawa scale; PB, population based.
Figure 2OR and 95% CIs of the associations between CD14 rs2569190 C>T polymorphism and ischemic stroke susceptibility in T vs C model.
Figure 3Cumulative meta-analyses according to publication year in T vs C model of CD14 rs2569190 C>T polymorphism.
Figure 4Sensitivity analysis through deleting each study to reflect the influence of the individual dataset to the pooled ORs in T vs C model of CD14 rs2569190 C>T polymorphism.
Figure 5Funnel plot analysis to detect publication bias for T vs C model of CD14 rs2569190 C>T polymorphism.
Note: Circles represent the weight of the studies.