Literature DB >> 30605316

DNA Quadruple Helices in Nanotechnology.

Jean-Louis Mergny1,2,3, Dipankar Sen4,5.   

Abstract

DNA has played an early and powerful role in the development of bottom-up nanotechnologies, not least because of DNA's precise, predictable, and controllable properties of assembly on the nanometer scale. Watson-Crick complementarity has been used to build complex 2D and 3D architectures and design a number of nanometer-scale systems for molecular computing, transport, motors, and biosensing applications. Most of such devices are built with classical B-DNA helices and involve classical A-T/U and G-C base pairs. However, in addition to the above components underlying the iconic double helix, a number of alternative pairing schemes of nucleobases are known. This review focuses on two of these noncanonical classes of DNA helices: G-quadruplexes and the i-motif. The unique properties of these two classes of DNA helix have been utilized toward some remarkable constructions and applications: G-wires; nanostructures such as DNA origami; reconfigurable structures and nanodevices; the formation and utilization of hemin-utilizing DNAzymes, capable of generating varied outputs from biosensing nanostructures; composite nanostructures made up of DNA as well as inorganic materials; and the construction of nanocarriers that show promise for the therapeutics of diseases.

Entities:  

Year:  2019        PMID: 30605316     DOI: 10.1021/acs.chemrev.8b00629

Source DB:  PubMed          Journal:  Chem Rev        ISSN: 0009-2665            Impact factor:   60.622


  43 in total

1.  Stability of the pH-Dependent Parallel-Stranded d(CGA) Motif.

Authors:  Emily M Luteran; Jason D Kahn; Paul J Paukstelis
Journal:  Biophys J       Date:  2020-09-11       Impact factor: 4.033

2.  Interplay of Guanine Oxidation and G-Quadruplex Folding in Gene Promoters.

Authors:  Aaron M Fleming; Cynthia J Burrows
Journal:  J Am Chem Soc       Date:  2020-01-09       Impact factor: 15.419

Review 3.  Studying the excited electronic states of guanine rich DNA quadruplexes by quantum mechanical methods: main achievements and perspectives.

Authors:  Lara Martínez-Fernández; Luciana Esposito; Roberto Improta
Journal:  Photochem Photobiol Sci       Date:  2020-04-15       Impact factor: 3.982

4.  Quadruplex World.

Authors:  Besik Kankia
Journal:  Orig Life Evol Biosph       Date:  2021-07-02       Impact factor: 1.950

5.  HIV-1 genomic RNA U3 region forms a stable quadruplex-hairpin structure.

Authors:  Chelsea Harpster; Elaina Boyle; Karin Musier-Forsyth; Besik Kankia
Journal:  Biophys Chem       Date:  2021-03-08       Impact factor: 2.352

6.  Rational design of guiding elements to control folding topology in i-motifs with multiple quadruplexes.

Authors:  Alexander S Minasyan; Srinivas Chakravarthy; Suchitra Vardelly; Mark Joseph; Evgueni E Nesterov; Irina V Nesterova
Journal:  Nanoscale       Date:  2021-05-20       Impact factor: 7.790

7.  Supramolecular Polymorphism of (G4C2)n Repeats Associated with ALS and FTD.

Authors:  Melani Potrč; Nerea Sebastián; Miha Škarabot; Irena Drevenšek-Olenik; Lea Spindler
Journal:  Int J Mol Sci       Date:  2021-04-26       Impact factor: 5.923

8.  Intrinsic dynamic and static nature of each HB in the multi-HBs between nucleobase pairs and its behavior, elucidated with QTAIM dual functional analysis and QC calculations.

Authors:  Waro Nakanishi; Satoko Hayashi; Taro Nishide
Journal:  RSC Adv       Date:  2020-07-01       Impact factor: 3.361

9.  DNAzyme Sensor Uses Chemiluminescence Resonance Energy Transfer for Rapid, Portable, and Ratiometric Detection of Metal Ions.

Authors:  Jiao Zheng; Jing Luen Wai; Ryan J Lake; Siu Yee New; Zhike He; Yi Lu
Journal:  Anal Chem       Date:  2021-07-26       Impact factor: 8.008

10.  Selective targeting of mutually exclusive DNA G-quadruplexes: HIV-1 LTR as paradigmatic model.

Authors:  Martina Tassinari; Michela Zuffo; Matteo Nadai; Valentina Pirota; Adriana Carolina Sevilla Montalvo; Filippo Doria; Mauro Freccero; Sara N Richter
Journal:  Nucleic Acids Res       Date:  2020-05-21       Impact factor: 16.971

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