Literature DB >> 30602589

Initial Guidelines for Manuscripts Employing Data-independent Acquisition Mass Spectrometry for Proteomic Analysis.

Robert J Chalkley1, Michael J MacCoss2, Jacob D Jaffe3, Hannes L Röst4.   

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Year:  2019        PMID： 30602589      PMCID： PMC6317474          DOI： 10.1074/mcp.E118.001286

Source DB:  PubMed          Journal:  Mol Cell Proteomics        ISSN： 1535-9476            Impact factor:   5.911


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  8 in total

1.  Shotgun collision-induced dissociation of peptides using a time of flight mass analyzer.

Authors:  Samuel Purvine; Jason-Thomas Eppel; Eugene C Yi; David R Goodlett
Journal:  Proteomics       Date:  2003-06       Impact factor: 3.984

2.  Automated approach for quantitative analysis of complex peptide mixtures from tandem mass spectra.

Authors:  John D Venable; Meng-Qiu Dong; James Wohlschlegel; Andrew Dillin; John R Yates
Journal:  Nat Methods       Date:  2004-09-29       Impact factor: 28.547

3.  Reporting protein identification data: the next generation of guidelines.

Authors:  Ralph A Bradshaw; Alma L Burlingame; Steven Carr; Ruedi Aebersold
Journal:  Mol Cell Proteomics       Date:  2006-05       Impact factor: 5.911

4.  New Guidelines for Publication of Manuscripts Describing Development and Application of Targeted Mass Spectrometry Measurements of Peptides and Proteins.

Authors:  Susan Abbatiello; Bradley L Ackermann; Christoph Borchers; Ralph A Bradshaw; Steven A Carr; Robert Chalkley; Meena Choi; Eric Deutsch; Bruno Domon; Andrew N Hoofnagle; Hasmik Keshishian; Eric Kuhn; Daniel C Liebler; Michael MacCoss; Brendan MacLean; D R Mani; Hendrik Neubert; Derek Smith; Olga Vitek; Lisa Zimmerman
Journal:  Mol Cell Proteomics       Date:  2017-02-09       Impact factor: 5.911

5.  Glycomics: building upon proteomics to advance glycosciences.

Authors:  Lance Wells; Gerald W Hart
Journal:  Mol Cell Proteomics       Date:  2013-02-01       Impact factor: 5.911

6.  Scanning Quadrupole Data-Independent Acquisition, Part A: Qualitative and Quantitative Characterization.

Authors:  M Arthur Moseley; Christopher J Hughes; Praveen R Juvvadi; Erik J Soderblom; Sarah Lennon; Simon R Perkins; J Will Thompson; William J Steinbach; Scott J Geromanos; Jason Wildgoose; James I Langridge; Keith Richardson; Johannes P C Vissers
Journal:  J Proteome Res       Date:  2017-12-29       Impact factor: 4.466

Review 7.  Multiplexed and data-independent tandem mass spectrometry for global proteome profiling.

Authors:  John D Chapman; David R Goodlett; Christophe D Masselon
Journal:  Mass Spectrom Rev       Date:  2013-11-26       Impact factor: 10.946

8.  Multiplexed MS/MS for improved data-independent acquisition.

Authors:  Jarrett D Egertson; Andreas Kuehn; Gennifer E Merrihew; Nicholas W Bateman; Brendan X MacLean; Ying S Ting; Jesse D Canterbury; Donald M Marsh; Markus Kellmann; Vlad Zabrouskov; Christine C Wu; Michael J MacCoss
Journal:  Nat Methods       Date:  2013-06-23       Impact factor: 28.547
  8 in total
  3 in total

1.  Mass Spectrometry-Based Plasma Proteomics: Considerations from Sample Collection to Achieving Translational Data.

Authors:  Vera Ignjatovic; Philipp E Geyer; Krishnan K Palaniappan; Jessica E Chaaban; Gilbert S Omenn; Mark S Baker; Eric W Deutsch; Jochen M Schwenk
Journal:  J Proteome Res       Date:  2019-10-11       Impact factor: 4.466

2.  Human Proteome Project Mass Spectrometry Data Interpretation Guidelines 3.0.

Authors:  Eric W Deutsch; Lydie Lane; Christopher M Overall; Nuno Bandeira; Mark S Baker; Charles Pineau; Robert L Moritz; Fernando Corrales; Sandra Orchard; Jennifer E Van Eyk; Young-Ki Paik; Susan T Weintraub; Yves Vandenbrouck; Gilbert S Omenn
Journal:  J Proteome Res       Date:  2019-10-21       Impact factor: 4.466

3.  Reproducibility and Transparency by Design.

Authors:  Vladislav A Petyuk; Laurent Gatto; Samuel H Payne
Journal:  Mol Cell Proteomics       Date:  2019-07-04       Impact factor: 5.911
  3 in total

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