Literature DB >> 16670253

Reporting protein identification data: the next generation of guidelines.

Ralph A Bradshaw, Alma L Burlingame, Steven Carr, Ruedi Aebersold.   

Abstract

Mesh：

Substances：

Year:  2006        PMID： 16670253     DOI： 10.1074/mcp.E600005-MCP200

Source DB:  PubMed          Journal:  Mol Cell Proteomics        ISSN： 1535-9476            Impact factor:   5.911


× No keyword cloud information.
  91 in total

1.  Recommendations for mass spectrometry data quality metrics for open access data (corollary to the Amsterdam Principles).

Authors:  Christopher R Kinsinger; James Apffel; Mark Baker; Xiaopeng Bian; Christoph H Borchers; Ralph Bradshaw; Mi-Youn Brusniak; Daniel W Chan; Eric W Deutsch; Bruno Domon; Jeff Gorman; Rudolf Grimm; William Hancock; Henning Hermjakob; David Horn; Christie Hunter; Patrik Kolar; Hans-Joachim Kraus; Hanno Langen; Rune Linding; Robert L Moritz; Gilbert S Omenn; Ron Orlando; Akhilesh Pandey; Peipei Ping; Amir Rahbar; Robert Rivers; Sean L Seymour; Richard J Simpson; Douglas Slotta; Richard D Smith; Stephen E Stein; David L Tabb; Danilo Tagle; John R Yates; Henry Rodriguez
Journal:  Mol Cell Proteomics       Date:  2011-11-03       Impact factor: 5.911

2.  Analysis of protein mixtures from whole-cell extracts by single-run nanoLC-MS/MS using ultralong gradients.

Authors:  Thomas Köcher; Peter Pichler; Remco Swart; Karl Mechtler
Journal:  Nat Protoc       Date:  2012-04-12       Impact factor: 13.491

Review 3.  Modification site localization scoring: strategies and performance.

Authors:  Robert J Chalkley; Karl R Clauser
Journal:  Mol Cell Proteomics       Date:  2012-02-11       Impact factor: 5.911

Review 4.  What's driving false discovery rates?

Authors:  David L Tabb
Journal:  J Proteome Res       Date:  2007-12-15       Impact factor: 4.466

5.  Factors that contribute to the misidentification of tyrosine nitration by shotgun proteomics.

Authors:  Stanley M Stevens; Katalin Prokai-Tatrai; Laszlo Prokai
Journal:  Mol Cell Proteomics       Date:  2008-08-16       Impact factor: 5.911

6.  LuciPHOr: algorithm for phosphorylation site localization with false localization rate estimation using modified target-decoy approach.

Authors:  Damian Fermin; Scott J Walmsley; Anne-Claude Gingras; Hyungwon Choi; Alexey I Nesvizhskii
Journal:  Mol Cell Proteomics       Date:  2013-08-05       Impact factor: 5.911

7.  Target-decoy search strategy for mass spectrometry-based proteomics.

Authors:  Joshua E Elias; Steven P Gygi
Journal:  Methods Mol Biol       Date:  2010

8.  PGCA: An algorithm to link protein groups created from MS/MS data.

Authors:  David Kepplinger; Mandeep Takhar; Mayu Sasaki; Zsuzsanna Hollander; Derek Smith; Bruce McManus; W Robert McMaster; Raymond T Ng; Gabriela V Cohen Freue
Journal:  PLoS One       Date:  2017-05-31       Impact factor: 3.240

9.  Quantitative proteomics analysis of chondrogenic differentiation of C3H10T1/2 mesenchymal stem cells by iTRAQ labeling coupled with on-line two-dimensional LC/MS/MS.

Authors:  Yu-hua Ji; Ju-ling Ji; Fen-yong Sun; Yao-ying Zeng; Xian-hui He; Jing-xian Zhao; Yu Yu; Shou-he Yu; Wei Wu
Journal:  Mol Cell Proteomics       Date:  2009-12-15       Impact factor: 5.911

10.  Reanalysis of Tyrannosaurus rex Mass Spectra.

Authors:  Marshall Bern; Brett S Phinney; David Goldberg
Journal:  J Proteome Res       Date:  2009-09       Impact factor: 4.466
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.