| Literature DB >> 30598787 |
Wai-Tim Ng1, Alexsandro Cândido de Oliveira Silva2, Purity Rima3,4, Clement Atzberger1, Markus Immitzer1.
Abstract
AIM: Prosopis spp. are an invasive alien plant species native to the Americas and well adapted to thrive in arid environments. In Kenya, several remote-sensing studies conclude that the genus is well established throughout the country and is rapidly invading new areas. This research aims to model the potential habitat of Prosopis spp. by using an ensemble model consisting of four species distribution models. Furthermore, environmental and expert knowledge-based variables are assessed. LOCATION: Turkana County, Kenya.Entities:
Keywords: Prosopis; ensemble modeling; expert knowledge; invasive alien species; species distribution modeling
Year: 2018 PMID: 30598787 PMCID: PMC6303778 DOI: 10.1002/ece3.4649
Source DB: PubMed Journal: Ecol Evol ISSN: 2045-7758 Impact factor: 2.912
Figure 1Prosopis spp. invading: (left) farmland with young plants emerging on the foreground, (center) pastoral land, and (right) near ephemeral rivers
Figure 2The study area of Turkana, Kenya, and the reference data set (red: presence; green: absence). Data are displayed with the ASTER GDEM along with ephemeral rivers (blue) and settlements (transparent circle)
Figure 3The workflow for predicting Prosopis spp. habitat. The evaluation (block cross‐validation and threshold assignment) was also performed on the individual models
Figure 4A Directed acyclic graph (DAG) representing habitat suitability of Prosopis spp. The rectangular nodes proved the condition/justification and underlying process for using a variable. The full variable description can be found in Table S1
Accuracy assessment of the block cross‐validation modeling results
| LR | ME | RF | BN | EM | |
|---|---|---|---|---|---|
| Probability threshold | 0.205 | 0.165 | 0.560 | 0.635 | 0.425 |
| Sensitivity | 0.978 | 0.912 | 0.989 | 0.901 | 0.989 |
| Specificity | 0.859 | 0.967 | 1.000 | 0.946 | 0.989 |
| True skill statistic | 0.837 | 0.879 | 0.989 | 0.847 | 0.978 |
| Overall accuracy | 0.918 | 0.940 | 0.995 | 0.923 | 0.989 |
| Kappa index | 0.836 | 0.880 | 0.989 | 0.847 | 0.978 |
BN: Bayesian Network; EM: Ensemble model; LR: logistic regression; ME: MaxEnt; RF: Random Forest.
Figure 5The Prosopis spp. habitat suitability map of the ensemble model. The pixels with values above the probability threshold of 0.43 were divided into “low” (yellow), “moderate” (orange), and “high” (red) suitable habitat
Area of each habitat suitability class of the ensemble model output. The pixels were grouped in not suitable, low, moderate, and high habitat suitability
| Habitat suitability | ha | Area (%) |
|---|---|---|
| Not suitable | 4,704,426.947 | 69 |
| Low | 1,100,733.03 | 16 |
| Moderate | 596,551.962 | 9 |
| High | 421,450.12 | 6 |