Literature DB >> 30591961

Genome-wide analysis identified 17 new loci influencing intraocular pressure in Chinese population.

Lulin Huang1,2, Yuhong Chen3, Ying Lin4,5, Pancy O S Tam6, Yilian Cheng7, Yi Shi4, Bo Gong4, Fang Lu4, Jialiang Yang4, Haixin Wang4, Yi Yin4, Yong Cao4, Dan Jiang4, Ling Zhong4, Bai Xue4, Jing Wang4, Fang Hao4, Dean-Yao Lee4, Chi-Pui Pang6, Xinghuai Sun3, Zhenglin Yang8,9.   

Abstract

Intraocular pressure (IOP) is a major risk factor for glaucoma. Genetic determinants of intraocular pressure can provide critical insights into the genetic architecture of glaucoma and, as a result, open new avenues for therapeutic intervention. We performed a genome-wide association study and replication analysis of 8,552 Chinese participants. In the genome-wide association study, we identified 51 loci that surpassed the significance of P<9×10-7, and we formally replicated these loci. A combined discovery and replication meta-analysis identified 21 genome-wide loci that surpassed the genome-wide significance of P<5×10-8, including 4 previously reported loci: rs145063132 (7p21.2, ETV1/DGKB), rs548030386 (7q31.2, ST7 near CAV1/CAV2), rs7047871 (9p24.2, GLIS3), and rs2472494 (9q31.1, ABCA1/SLC44A1). Of the 17 newly identified loci, five were reported to have ocular related phenotypes: PTCH2 (rs7525308 in 1p34.1), LRIF1/DRAM2 (rs1282146 in 1p13.3), COLEC11 (rs201143466 in 2p25.3), SPTBN1 (rs4514918 in 2p16.2), and CRK (rs11078446 in 17p13.3). The genetic loci identified in this study not only increase our understanding of the genes involved in intraocular pressure but also provide important genetic markers to improve future genetic screening and drug discovery for intraocular pressure disorders.

Entities:  

Keywords:  genome-wide association study; glaucoma; intraocular pressure

Mesh:

Substances:

Year:  2018        PMID: 30591961     DOI: 10.1007/s11427-018-9430-2

Source DB:  PubMed          Journal:  Sci China Life Sci        ISSN: 1674-7305            Impact factor:   6.038


  8 in total

1.  Deep Sc-RNA sequencing decoding the molecular dynamic architecture of the human retina.

Authors:  Lulin Huang; Runze Li; Lin Ye; Shanshan Zhang; Huaping Tian; Mingyan Du; Chao Qu; Shujin Li; Jie Li; Mu Yang; Biao Wu; Ran Chen; Guo Huang; Ling Zhong; Hongjie Yang; Man Yu; Yi Shi; Changguan Wang; Houbin Zhang; Wei Chen; Zhenglin Yang
Journal:  Sci China Life Sci       Date:  2022-09-15       Impact factor: 10.372

Review 2.  Asian Race and Primary Open-Angle Glaucoma: Where Do We Stand?

Authors:  Aditya Belamkar; Alon Harris; Francesco Oddone; Alice Verticchio Vercellin; Anna Fabczak-Kubicka; Brent Siesky
Journal:  J Clin Med       Date:  2022-04-28       Impact factor: 4.964

3.  BDNF improves axon transportation and rescues visual function in a rodent model of acute elevation of intraocular pressure.

Authors:  Rui Du; Xu Wang; Shigang He
Journal:  Sci China Life Sci       Date:  2020-03-16       Impact factor: 6.038

4.  A comprehensive map of disease networks and molecular drug discoveries for glaucoma.

Authors:  Haixin Wang; Yanhui Deng; Ling Wan; Lulin Huang
Journal:  Sci Rep       Date:  2020-06-16       Impact factor: 4.379

Review 5.  Artificial intelligence to deep learning: machine intelligence approach for drug discovery.

Authors:  Rohan Gupta; Devesh Srivastava; Mehar Sahu; Swati Tiwari; Rashmi K Ambasta; Pravir Kumar
Journal:  Mol Divers       Date:  2021-04-12       Impact factor: 3.364

6.  Metagenomic analysis of gut microbiota in non-treated plaque psoriasis patients stratified by disease severity: development of a new Psoriasis-Microbiome Index.

Authors:  Ignacio Dei-Cas; Florencia Giliberto; Leonela Luce; Hernán Dopazo; Alberto Penas-Steinhardt
Journal:  Sci Rep       Date:  2020-07-29       Impact factor: 4.379

7.  Mendelian randomization analysis identified genes pleiotropically associated with central corneal thickness.

Authors:  Zhikun Yang; Jingyun Yang; Di Liu; Weihong Yu
Journal:  BMC Genomics       Date:  2021-07-07       Impact factor: 3.969

Review 8.  βII spectrin (SPTBN1): biological function and clinical potential in cancer and other diseases.

Authors:  Panyu Yang; Yanyan Yang; Pin Sun; Yu Tian; Fang Gao; Chen Wang; Tingyu Zong; Min Li; Ying Zhang; Tao Yu; Zhirong Jiang
Journal:  Int J Biol Sci       Date:  2021-01-01       Impact factor: 6.580

  8 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.