Literature DB >> 30582520

The Resolution Matrix in Tomographic Multiplexing: Optimization of Inter-Parameter Cross-Talk, Relative Quantitation, and Localization.

Steven S Hou, Brian J Bacskai, Anand T N Kumar.   

Abstract

OBJECTIVE: We use a resolution matrix-based Bayesian framework to compare inversion methods for tomographic fluorescence lifetime multiplexing in a diffuse medium, such as biological tissue.
METHODS: We consider three inversion methods; an asymptotic time domain (ATD) approach, based on a multiexponential analysis of time domain data, a direct time domain (DTD) approach, which is a minimum error solution, and a cross-talk constrained time domain (CCTD) inversion, which is a solution to an optimization problem that minimizes both error and cross-talk. We compare these methods using Monte Carlo simulations and time domain fluorescence measurements with tissue-mimicking phantoms.
RESULTS: The ATD approach provides high accuracy of relative quantitation and spatial localization of two fluorophores embedded in a 18-mm thick turbid medium, with concentration ratios of up to 1:4.25. DTD leads to significant errors in relative quantitation and localization. CCTD provides improved quantitation accuracy over DTD, and better spatial resolution compared to ATD. We present a rigorous theoretical basis for these results and provide a complete derivation of the CCTD estimator. The Bayesian analysis also leads to a formula for rapid computation of the DTD inverse operator for large-scale tomography measurements.
CONCLUSION: The ATD and CCTD inversion methods provide significant advantages over DTD for accurately estimating multiple overlapping fluorophores. SIGNIFICANCE: Time domain fluorescence tomography, using zero cross-talk estimators, can serve as a powerful tool for quantifying multiple fluorescently labeled biological processes. The Bayesian framework presented here can be applied to general multiparameter inverse problems for the quantitative estimation of multiple overlapping parameters.

Entities:  

Year:  2018        PMID: 30582520      PMCID: PMC6659996          DOI: 10.1109/TBME.2018.2889043

Source DB:  PubMed          Journal:  IEEE Trans Biomed Eng        ISSN: 0018-9294            Impact factor:   4.538


  17 in total

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Authors:  Edward E Graves; Jorge Ripoll; Ralph Weissleder; Vasilis Ntziachristos
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Review 2.  Fluorescence lifetime measurements and biological imaging.

Authors:  Mikhail Y Berezin; Samuel Achilefu
Journal:  Chem Rev       Date:  2010-05-12       Impact factor: 60.622

3.  Lifetime-based tomographic multiplexing.

Authors:  Scott B Raymond; David A Boas; Brian J Bacskai; Anand T N Kumar
Journal:  J Biomed Opt       Date:  2010 Jul-Aug       Impact factor: 3.170

Review 4.  FRET microscopy: from principle to routine technology in cell biology.

Authors:  A Pietraszewska-Bogiel; T W J Gadella
Journal:  J Microsc       Date:  2010-09-27       Impact factor: 1.758

5.  Fluorescence-lifetime-based tomography for turbid media.

Authors:  Anand T N Kumar; Jesse Skoch; Brian J Bacskai; David A Boas; Andrew K Dunn
Journal:  Opt Lett       Date:  2005-12-15       Impact factor: 3.776

6.  Weight-matrix structured regularization provides optimal generalized least-squares estimate in diffuse optical tomography.

Authors:  Phaneendra K Yalavarthy; Brian W Pogue; Hamid Dehghani; Keith D Paulsen
Journal:  Med Phys       Date:  2007-06       Impact factor: 4.071

7.  Spatially variant regularization improves diffuse optical tomography.

Authors:  B W Pogue; T O McBride; J Prewitt; U L Osterberg; K D Paulsen
Journal:  Appl Opt       Date:  1999-05-01       Impact factor: 1.980

8.  A time domain fluorescence tomography system for small animal imaging.

Authors:  Anand T N Kumar; Scott B Raymond; Andrew K Dunn; Brian J Bacskai; David A Boas
Journal:  IEEE Trans Med Imaging       Date:  2008-08       Impact factor: 10.048

9.  Time resolved fluorescence tomography of turbid media based on lifetime contrast.

Authors:  Anand T Kumar; Scott B Raymond; Gregory Boverman; David A Boas; Brian J Bacskai
Journal:  Opt Express       Date:  2006-12-11       Impact factor: 3.894

10.  Optimal estimator for tomographic fluorescence lifetime multiplexing.

Authors:  Steven S Hou; Brian J Bacskai; Anand T N Kumar
Journal:  Opt Lett       Date:  2016-04-01       Impact factor: 3.776

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  1 in total

1.  Comparison of fluorescence lifetime and multispectral imaging for quantitative multiplexing in biological tissue.

Authors:  Rahul Pal; Anand T N Kumar
Journal:  Biomed Opt Express       Date:  2022-06-09       Impact factor: 3.562

  1 in total

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