Literature DB >> 30578346

Noise in bacterial gene expression.

Christoph Engl1.   

Abstract

The expression level of a gene can fluctuate significantly between individuals within a population of genetically identical cells. The resultant phenotypic heterogeneity could be exploited by bacteria to adapt to changing environmental conditions. Noise is hence a genome-wide phenomenon that arises from the stochastic nature of the biochemical reactions that take place during gene expression and the relatively low abundance of the molecules involved. The production of mRNA and proteins therefore occurs in bursts, with alternating episodes of high and low activity during transcription and translation. Single-cell and single-molecule studies demonstrated that noise within gene expression is influenced by a combination of both intrinsic and extrinsic factors. However, our mechanistic understanding of this process at the molecular level is still rather limited. Further investigation is necessary that takes into account the detailed knowledge of gene regulation gained from biochemical studies.
© 2019 The Author(s). Published by Portland Press Limited on behalf of the Biochemical Society.

Keywords:  adaptive response; bacteria; gene expression and regulation; transcription; translation

Mesh:

Substances:

Year:  2018        PMID: 30578346     DOI: 10.1042/BST20180500

Source DB:  PubMed          Journal:  Biochem Soc Trans        ISSN: 0300-5127            Impact factor:   5.407


  6 in total

1.  The transcription factor network of E. coli steers global responses to shifts in RNAP concentration.

Authors:  Bilena L B Almeida; Mohamed N M Bahrudeen; Vatsala Chauhan; Suchintak Dash; Vinodh Kandavalli; Antti Häkkinen; Jason Lloyd-Price; Palma S D Cristina; Ines S C Baptista; Abhishekh Gupta; Juha Kesseli; Eric Dufour; Olli-Pekka Smolander; Matti Nykter; Petri Auvinen; Howard T Jacobs; Samuel M D Oliveira; Andre S Ribeiro
Journal:  Nucleic Acids Res       Date:  2022-06-24       Impact factor: 19.160

Review 2.  Functional roles of microbial cell-to-cell heterogeneity and emerging technologies for analysis and control.

Authors:  Nadia Maria Vieira Sampaio; Mary J Dunlop
Journal:  Curr Opin Microbiol       Date:  2020-09-09       Impact factor: 7.934

3.  A Non-genetic Mechanism Involving the Integrin β4/Paxillin Axis Contributes to Chemoresistance in Lung Cancer.

Authors:  Atish Mohanty; Arin Nam; Alex Pozhitkov; Lu Yang; Saumya Srivastava; Anusha Nathan; Xiwei Wu; Isa Mambetsariev; Michael Nelson; A R Subbalakshmi; Linlin Guo; Mohd W Nasser; Surinder K Batra; John Orban; Mohit Kumar Jolly; Erminia Massarelli; Prakash Kulkarni; Ravi Salgia
Journal:  iScience       Date:  2020-08-22

4.  Visualization of Gene Reciprocity among Lactic Acid Bacteria in Yogurt by RNase H-Assisted Rolling Circle Amplification-Fluorescence In Situ Hybridization.

Authors:  Kyohei Horio; Hirokazu Takahashi; Toshiro Kobori; Kenshi Watanabe; Tsunehiro Aki; Yutaka Nakashimada; Yoshiko Okamura
Journal:  Microorganisms       Date:  2021-06-03

5.  Gene expression noise in a complex artificial toxin expression system.

Authors:  Alexandra Goetz; Andreas Mader; Benedikt von Bronk; Anna S Weiss; Madeleine Opitz
Journal:  PLoS One       Date:  2020-01-21       Impact factor: 3.240

6.  Prochlorococcus Cells Rely on Microbial Interactions Rather than on Chlorotic Resting Stages To Survive Long-Term Nutrient Starvation.

Authors:  Dalit Roth-Rosenberg; Dikla Aharonovich; Tal Luzzatto-Knaan; Angela Vogts; Luca Zoccarato; Falk Eigemann; Noam Nago; Hans-Peter Grossart; Maren Voss; Daniel Sher
Journal:  mBio       Date:  2020-08-11       Impact factor: 7.867

  6 in total

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