Literature DB >> 30571100

Structural Evidence for Dimer-Interface-Driven Regulation of the Type II Cysteine Desulfurase, SufS.

Jack A Dunkle1, Michael R Bruno1, F Wayne Outten2, Patrick A Frantom1.   

Abstract

SufS is a type II cysteine desulfurase and acts as the initial step in the Suf Fe-S cluster assembly pathway. In Escherichia coli, this pathway is utilized under conditions of oxidative stress and is resistant to reactive oxygen species. Mechanistically, this means SufS must shift between protecting a covalent persulfide intermediate and making it available for transfer to the next protein partner in the pathway, SufE. Here, we report five X-ray crystal structures of SufS including a new structure of SufS containing an inward-facing persulfide intermediate on C364. Additional structures of SufS variants with substitutions at the dimer interface show changes in dimer geometry and suggest a conserved β-hairpin structure plays a role in mediating interactions with SufE. These new structures, along with previous HDX-MS and biochemical data, identify an interaction network capable of communication between active-sites of the SufS dimer coordinating the shift between desulfurase and transpersulfurase activities.

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Year:  2019        PMID: 30571100      PMCID: PMC6676893          DOI: 10.1021/acs.biochem.8b01122

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  32 in total

1.  (IscS-IscU)2 complex structures provide insights into Fe2S2 biogenesis and transfer.

Authors:  Elodie N Marinoni; Jaim S de Oliveira; Yvain Nicolet; Estella C Raulfs; Patricia Amara; Dennis R Dean; Juan C Fontecilla-Camps
Journal:  Angew Chem Int Ed Engl       Date:  2012-04-18       Impact factor: 15.336

Review 2.  Enzyme Function Initiative-Enzyme Similarity Tool (EFI-EST): A web tool for generating protein sequence similarity networks.

Authors:  John A Gerlt; Jason T Bouvier; Daniel B Davidson; Heidi J Imker; Boris Sadkhin; David R Slater; Katie L Whalen
Journal:  Biochim Biophys Acta       Date:  2015-04-18

3.  Analysis of the E. coli NifS CsdB protein at 2.0 A reveals the structural basis for perselenide and persulfide intermediate formation.

Authors:  Christopher D Lima
Journal:  J Mol Biol       Date:  2002-02-01       Impact factor: 5.469

4.  Linking crystallographic model and data quality.

Authors:  P Andrew Karplus; Kay Diederichs
Journal:  Science       Date:  2012-05-25       Impact factor: 47.728

5.  Crystal structure of a NifS-like protein from Thermotoga maritima: implications for iron sulphur cluster assembly.

Authors:  J T Kaiser; T Clausen; G P Bourenkow; H D Bartunik; S Steinbacher; R Huber
Journal:  J Mol Biol       Date:  2000-03-24       Impact factor: 5.469

6.  Kinetic analysis of the bisubstrate cysteine desulfurase SufS from Bacillus subtilis.

Authors:  Bruna Selbach; Emily Earles; Patricia C Dos Santos
Journal:  Biochemistry       Date:  2010-09-16       Impact factor: 3.162

7.  The SufE protein and the SufBCD complex enhance SufS cysteine desulfurase activity as part of a sulfur transfer pathway for Fe-S cluster assembly in Escherichia coli.

Authors:  F Wayne Outten; Matthew J Wood; F Michael Munoz; Gisela Storz
Journal:  J Biol Chem       Date:  2003-08-26       Impact factor: 5.157

8.  Structural changes during cysteine desulfurase CsdA and sulfur acceptor CsdE interactions provide insight into the trans-persulfuration.

Authors:  Sunmin Kim; SangYoun Park
Journal:  J Biol Chem       Date:  2013-08-02       Impact factor: 5.157

9.  Changes in Protein Dynamics in Escherichia coli SufS Reveal a Possible Conserved Regulatory Mechanism in Type II Cysteine Desulfurase Systems.

Authors:  Dokyong Kim; Harsimran Singh; Yuyuan Dai; Guangchao Dong; Laura S Busenlehner; F Wayne Outten; Patrick A Frantom
Journal:  Biochemistry       Date:  2018-04-05       Impact factor: 3.162

Review 10.  Interplay between oxygen and Fe-S cluster biogenesis: insights from the Suf pathway.

Authors:  Eric S Boyd; Khaleh M Thomas; Yuyuan Dai; Jeff M Boyd; F Wayne Outten
Journal:  Biochemistry       Date:  2014-09-11       Impact factor: 3.162

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  5 in total

Review 1.  Fe-S cluster biogenesis by the bacterial Suf pathway.

Authors:  Matthew Blahut; Enis Sanchez; Claire E Fisher; F Wayne Outten
Journal:  Biochim Biophys Acta Mol Cell Res       Date:  2020-08-18       Impact factor: 4.739

2.  Direct observation of intermediates in the SufS cysteine desulfurase reaction reveals functional roles of conserved active-site residues.

Authors:  Matthew Blahut; Courtney E Wise; Michael R Bruno; Guangchao Dong; Thomas M Makris; Patrick A Frantom; Jack A Dunkle; F Wayne Outten
Journal:  J Biol Chem       Date:  2019-06-27       Impact factor: 5.157

3.  Hydrogen Sulfide From Cysteine Desulfurase, Not 3-Mercaptopyruvate Sulfurtransferase, Contributes to Sustaining Cell Growth and Bioenergetics in E. coli Under Anaerobic Conditions.

Authors:  Jun Wang; Xin Guo; Heng Li; Haizhen Qi; Jing Qian; Shasha Yan; Junling Shi; Weining Niu
Journal:  Front Microbiol       Date:  2019-10-11       Impact factor: 5.640

4.  Structural diversity of cysteine desulfurases involved in iron-sulfur cluster biosynthesis.

Authors:  Takashi Fujishiro; Ryosuke Nakamura; Kouhei Kunichika; Yasuhiro Takahashi
Journal:  Biophys Physicobiol       Date:  2022-02-08

Review 5.  The Multifaceted Bacterial Cysteine Desulfurases: From Metabolism to Pathogenesis.

Authors:  Mayashree Das; Arshiya Dewan; Somnath Shee; Amit Singh
Journal:  Antioxidants (Basel)       Date:  2021-06-23
  5 in total

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