| Literature DB >> 30560226 |
Adriana Nunziata1, Jan-Bernd Funcke1, Guntram Borck2, Julia von Schnurbein1, Stephanie Brandt1, Belinda Lennerz3, Barbara Moepps4, Peter Gierschik4, Pamela Fischer-Posovszky1, Martin Wabitsch1.
Abstract
Several case series of extreme early-onset obesity due to mutations in the human leptin receptor (LEPR) gene have been reported. In this review we summarize published functional and phenotypic data on mutations in the human LEPR gene causing severe early-onset obesity. Additionally, we included data on six new cases from our obesity center. Literature research was performed using PubMed and OMIM. Functional relevance of mutations was estimated based on reported functional analysis, mutation size, and location, as well as phenotypic characteristics of affected patients. We identified 57 cases with 38 distinct LEPR mutations. We found severe early-onset obesity, hyperphagia, and hypogonadotropic hypogonadism as cardinal features of a complete loss of LEPR function. Other features, for example, metabolic disorders and recurring infections, were variable in manifestation. Obesity degree or other manifestations did not aggregate by genotype. Few patients underwent bariatric surgery with variable success. Most mutations occurred in the fibronectin III and cytokine receptor homology II domains, whereas none was found in cytoplasmic domain. In silico data were available for 25 mutations and in vitro data were available for four mutations, revealing residual activity in one case. By assessing provided information on the clinical phenotype, functional analysis, and character of the 38 mutations, we assume residual LEPR activity for five additional mutations. Functional in vitro analysis is necessary to confirm this assumption.Entities:
Keywords: early-onset obesity; leptin melanocortin signaling pathway; leptin receptor deficiency; monogenic obesity
Year: 2018 PMID: 30560226 PMCID: PMC6293235 DOI: 10.1210/js.2018-00123
Source DB: PubMed Journal: J Endocr Soc ISSN: 2472-1972
LEPR Isoforms in Humans and Mice
| Isoforms | Human | Mouse |
|---|---|---|
| Isoform A Alternative splicing | HuB or OB-R219.3: | LEPRa: |
| p.897–1165 missing | p.895–1162 missing | |
| p.892–896: PETFE → RTDIL | p.890–894: PETFE → RTDTL | |
| Isoform B Canonical sequence | HuB or OB-Rb/LEPRb: — | LEPRb: — |
| Isoform C Alternative splicing | HuB or OB-R219.1/LEPRa: | LEPRc: |
| p.907–1165 missing | p.893–1162 missing | |
| p.892–958: PETFEHLFIK ... EKGSVCISDQ | p.890–892: PET → VTV | |
| → MLEGSMFVKS ... KSPSVRNTQE | ||
| Isoform D Alternative splicing | HuB or OB-R219.2: | LEPRd: |
| p.959–1165 missing | p.901–1162 missing | |
| p.892–906: PETFEHLFIKHTASV → KMPGTKELLGGGWLT | p.890–900: PETFEHLFTKH → DISFHEVFIFR | |
| Isoform E Alternative splicing | sLEPR: | LEPRe/sLEPR: |
| p.842–1165 missing | p.806–1162 missing | |
| p.797-805: DNFIPIEKY → GMCTVLFMD |
Source: UniProt (mouse, http://www.uniprot.org/uniprot/P48356; human, http://www.uniprot.org/uniprot/P48357). Alternative nomenclature and protein sequence are given. LEPRb is the canonical sequence of LEPR. It is the most prevalent isoform, highly preserved among species, and has the longest amino acid sequence. LEPRb is the only isoform with clearly defined function and implications for body weight regulations.
Abbreviation: p., amino acid position in the protein.
Figure 1.Simplified depiction of the LEPR gene and the extracellular domain of the mature LEPR protein and visualization of mutations in the human LEPR protein. Transmembrane and cytoplasmatic domains are not depicted, as no human mutations have been described in these domains. Every exon is numbered and assigned to the domain it encodes in the LEPR protein (the structure of the LEPR protein is based on the information of Peelman et al. [12]). The functional relevance of LEPR domains is given. LEP interacting sites are marked by white or black lines in the protein sketch and are positioned in CRHI/immunoglobulin-like domain (p.L372, A409, Y411, H419, H420) and CRHII (p.L471, Y472, F500, IFLL503-506, F563). Positions of WSXWS motifs are depicted as green lines: 319 to 323 and 622 to 626. Colored dots indicate and type affected protein position of human LEPR mutations; mutations result in single amino acid changes (green dots), or a truncated protein (red dots). BS, binding site; IGD, immunoglobulin-like domain; p., amino acid position in the protein.
Overview of Mutations in the Human LEPR
| First Author and Year of Publication | Overview: LEPR Mutations | ||||||
|---|---|---|---|---|---|---|---|
| Number of Cases (n) | Case ID | Patient Nationality | Mutation in the Coding DNA (c.) | Mutation in the Mature Protein (p.) | Affected Domain | Provided Functional Analysis | |
| Clement | 3 | Clem_1.1, Clem_1.2, Clem_1.3 | Algerian | c.2597 + 1G>A | n.a. | FNIII | PCR and sequencing |
| Farooqi | 2 | Far_2.2, Far_2.1 | Turkish | n.a. | 11-bp del in codon 70 | NTD |
|
| Farooqi | 3 | Far_4.3, Far_4.2, Far_4.1 | Southern European | n.a. | p.W31* | NTD | n.a. |
| Farooqi | 1 | Far_3 | Iranian | n.a. | 66-bp del in codon 514 | CRHII |
|
| Farooqi | 1 | Far_5 | Turkish | c.1226C>A | p.A409E | IGD |
|
| Farooqi | 1 | Far_6 | Norwegian | n.a. | p.W664R | FNIII |
|
| Farooqi | 2 | Far_7; Ulm_3 | White (United Kingdom); German | c.2051A>C | p.H684P | FNIII |
|
| Le Beyec | 1 | Bey_1 | French | c.1871dupA | p.N624Kfs*21 | CRHII + FNIII |
|
| Kakar | 5 | Kak_1.1.1, Kak_1.1.2, Kak_1.2, Kak_1.3. Kak_1.4 | Pakistani | c.1603 + 5G>C | p.R468Sfs*33 | CRHII |
|
| Gill | 2 | Gil_2.1, Gil_2.2 | Sudanese | c.479delA | p.H160Lfs*10 | CRHI |
|
| Gill | 1 | Gil_1 | Guinean | c.556delT | p.C186Afs*28 | CRHI |
|
| Saeed | 4 | Sae_2, Sae2_3, Sae2_4, Sae2_5 | Pakistani | c.2396-1G>T | n.a. | FNIII |
|
| Saeed | 2 | Sae_1, Sae2_6 | Pakistani | c.1675G>A | p.W558* | CRHII |
|
| Huvenne | 1 | Huv_2 | French | c.1810T>G | p.C604G | CRHII |
|
| Huvenne | 1 | Huv_3 | Portuguese | c.2357T>C | p.L786P | FNIII |
|
| Huvenne | 1 | Huv_4 | Turkish | c.2491G>A | p.H800_N831del | FNIII |
|
| Huvenne | 5 | Huv_5, Huv_6, Huv_7, Huv_8, Huv_9 | French (Reunion Island) | Del exon 6–8 | p.P166Cfs*7 | CRHI |
|
| Ulm | 1 | Ulm_1 | Turkish | Del exon 4–20 | n.a. | CRHI-NTD | n.a. |
| Ulm | 1 | Ulm_4 | German | Comp. het. c.2227 T>C and c.2598-3_2607delTAGAATGAAAAAG | Comp. het. p.S743P and p.Q865_K870 | FNIII + CRHII |
|
| Ulm | 1 | Ulm_5 | Turkish | p.N154Kfs*3 | c.461dupA | CRHI |
|
| Ulm | 1 | Ulm_6 | German | Comp. het. c.1874G>A and c.2051A>C | Comp. het. p.W625* and p.H684P | FNIII + CRHII |
|
| Farooqi | 3 | Far_1.3, Far_1.2, Far_1.1 | Bangladeshi | n.a. | 4-bp del in codon 22 | NTD |
|
| Maezen | 2 | Maz_1, Maz_2 | Egyptian | c.946C>A | p.P316T | CRHI |
|
| Andiran | 2 | And_1, Ulm_2 | Turkish | c.946C>A and c. n.a. | p.P316T and p.W646C (both homozygous) | CRHI + FNIII |
|
| Huvenne | 1 | Huv_10 | French (Reunion Island) | Comp. het. c.1604–1G>A and del exon 6–8 | Comp. het. p. n.a and p.P166Cfs*7 | CRHII + CRHI |
|
| Hannema | 1 | Han_2 | Dutch | c.1604–8A>G | K536Sfs*34 and p.V535Dfs*3 | CRHII |
|
| Vauthier | 1 | Vau_1 | French | Del of | n.a. | NTD + CRII | PCR, MPLC |
| Huvenne | 2 | Huv_11.1, Huv_11.2 | French | Comp. het. c.1264T>C and c.2131dup | Comp. het. p.Y422H and p.T711N fs*18 | IGD + FNIII |
|
| Saeed | 2 | Sae2_2.1, Sae2_2.2 | Pakistani | c.1810T>A | p.C604S | CRHII |
|
| Saeed | 1 | Sae2_1 | Pakistani | Mutation not in transcript | n.a. | — |
|
| Hannema | 1 | Han_1 | Dutch | Comp. het. c.1753–1dupG and c.2168C>T | Comp. het. p.M585Dfs*2 and p.S723F | CRHII |
|
| Farooqi | 1 | Far_8 | White (United Kingdom) | Comp. het. c. n.a. and c.1835G>A | Comp. het. 1 bp del in codon 15 and p.R612H | NTD + CRHII |
|
Included are number of cases, case ID and nationality, location of the mutation in the LEPR protein, affected domain, and provided information about functional analysis. Estimation of the functional relevance of the respective mutation was made based on predefined criteria. Criteria for functional relevance were (1) highly suspicious BMI, (2) hypogonadotropic hypogonadism, (3) consanguineous parents, (4) highly suspicious variant, and (5) conclusive functional analysis. Conclusions on functional relevance are based on the number of fulfilled criteria: “High” indicates high evidence for complete loss of LEPR function (three to five criteria fulfilled); “Probably” indicates that the mutation is probably damaging (two to three criteria); “Low” indicates low evidence for functional relevance, with in vitro analyses necessary to exclude residual function of LEPR (two or fewer criteria).
Abbreviations: c., cDNA position in the gene; comp. het., compound heterozygous; del, deletion; fs, frameshift; HH, hypogonadotropic hypogonadism; MPLC, medium pressure liquid chromatography, n.a., no information available; p., amino acid position in the protein; Rf, residual function; *, premature stop codon.
Published as corresponding to p.K597Sfs*34 and p.V596Dfs*3 in the original paper. Based on the experimentally validated changes in the RNA, we assume the correct mutations to be p.K536Sfs*34 and p.V535Dfs*3.
Estimation of Functional Relevance of Mutations in the Human LEPR
| Overview: LEPR Mutations | Estimation of Functional Relevance | |||||
|---|---|---|---|---|---|---|
| Criteria for Functional Relevance | Evidence for Functional Relevance | |||||
| Case ID | Suspicious BMI | HH | Consanguineous Parents | Suspicious Variant | Conclusive Functional Analysis | |
| Clem_1.1, Clem_1.2, Clem_1.3 | X | X | X | X | X | High |
| Far_2.2, Far_2.1 | X | X | X | X | High | |
| Far_4.3, Far_4.2, Far_4.1 | X | X | X | X | High | |
| Far_3 | X | X | X | High | ||
| Far_5 | X | X | X | X | High | |
| Far_6 | X | X | X | X | High | |
| Far_7; Ulm_3 | X | X | High | |||
| Bey_1 | X | X | X | X | High | |
| Kak_1.1.1, Kak_1.1.2, Kak_1.2, Kak_1.3. Kak_1.4 | X (not for Kak_1.1.1) | X | X | High | ||
| Gil_2.1, Gil_2.2 | X | X | X | X | High | |
| Gil_1 | X | X | X | High | ||
| Sae_2, Sae2_3, Sae2_4, Sae2_5 | X | X | X | High | ||
| Sae_1, Sae2_6 | X | X | X | X | High | |
| Huv_2 | X | X | X | High | ||
| Huv_3 | X | X | X | High | ||
| Huv_4 | X | X | X | High | ||
| Huv_5, Huv_6, Huv_7, Huv_8, Huv_9 | X | X | X | High | ||
| Ulm_1 | X | X | X | High | ||
| Ulm_4 | X | X | X | High | ||
| Ulm_5 | X | X | X | High | ||
| Ulm_6 | X | X | X | High | ||
| Far_1.3, Far_1.2, Far_1.1 | X (only Far_1.1) | X | X | Probably | ||
| Maz_1, Maz_2 | X | X | X | Probably | ||
| And_1, Ulm_2 | X | X | X | Probably | ||
| Huv_10 | X | X | Probably | |||
| Han_2 | X | X | Probably | |||
| Vau_1 | Low | |||||
| Huv_11.1, Huv_11.2 | X | Low (for p.Y422H) | ||||
| Sae2_2.1, Sae2_2.2 | X | Low | ||||
| Sae2_1 | X | X | Low | |||
| Han_1 | Low (for p.S723F) | |||||
| Far_8 | Rf | |||||
Figure 2.Body fat percentages, BMI z scores, and serum LEP concentrations in patients with biallelic LEPR mutations. (A) Body fat percentage by sex (mean age females, 18.2 y; mean age males, 10.1 y; median females, 54.7%; median males 48.7%). (B) BMI z score by sex (mean age females, 15.8 y; mean age males, 7.8 y; median females, 4.95; median males, 4.5). (C) Serum LEP concentrations by sex (mean age females, 17.2 y; mean age males, 8.0 y; median females, 93.5 µg/L; median males, 58.4 µg/L). (D) Correlation of body fat percentage and serum LEP concentrations in females (mean age, 19.4 y; n = 9). (E) Correlation of body fat percentage and serum LEP concentrations in males (mean age, 10.1 y; n = 11).
LEPR-Deficient Patients Who Underwent Bariatric Surgery
| Patient ID | Age at Surgery (y) | Sex | Type of Intervention | Achieved Weight Loss (kg) | Complications/Weight Regain |
|---|---|---|---|---|---|
| Clem_1.1 | 16 | F | Abdominoplasty | n.a. | n.a. |
| 24 | Gastric bypass | 50 | Weight regain after pregnancy (+50 kg) | ||
| Bey_1 | 16 | M | Gastric banding | 46 | Gastric band slippage, weight regain |
| 18 | Gastroplasty | 40 | — | ||
| Huv_2 | n.a. | F | Gastric bypass | 45 | Weight regain (+34 kg) |
| Huv_3 | n.a. | M | Gastroplasty | −44% of body weight | No follow-up data |
| Ulm_4 | 18 | F | Sleeve gastrectomy | 30 | Weight regain (+19 kg) |
| Ulm_6 | 14 | M | Gastric banding | 47 | Gastric band slippage, weight regain (+10 kg) |
We report age at surgery, type of surgery, weight loss in kilograms, reported complications, and the weight regain surgery where information is available.
Abbreviations: F, female; M, male; n.a., no information available.