Literature DB >> 30554028

Mechanical regulation of genome architecture and cell-fate decisions.

G V Shivashankar1.   

Abstract

Landmark experiments in vitro showed that somatic cells can be reprogrammed to stem-cells by the constitutive expression of particular transcription factors. However, in vivo cells naturally exhibit de-differentiation and trans-differentiation programs, thereby suggesting that the signals from the local mechanical microenvironment may be sufficient to induce stem-cell state transitions. In this review, we discuss recent evidence for the biophysical regulation of genome architecture and nuclear programs. We start by discussing the coupling between cellular architecture, genome organization and gene expression. We then review the role of biophysical factors in regulating genome architecture and cell-state transitions. Finally, we discuss the molecular basis of cell-state transitions during nuclear reprogramming. Collectively, we highlight the importance of the mechanical regulation of genome organization on cell-fate decisions.
Copyright © 2018. Published by Elsevier Ltd.

Mesh:

Year:  2018        PMID: 30554028     DOI: 10.1016/j.ceb.2018.12.001

Source DB:  PubMed          Journal:  Curr Opin Cell Biol        ISSN: 0955-0674            Impact factor:   8.382


  8 in total

1.  Constricted migration is associated with stable 3D genome structure differences in cancer cells.

Authors:  Rosela Golloshi; Christopher Playter; Trevor F Freeman; Priyojit Das; Thomas Isaac Raines; Joshua H Garretson; Delaney Thurston; Rachel Patton McCord
Journal:  EMBO Rep       Date:  2022-08-15       Impact factor: 9.071

2.  The Cell as Matter: Connecting Molecular Biology to Cellular Functions.

Authors:  Yiwei Li; Wenhui Tang; Ming Guo
Journal:  Matter       Date:  2021-06-02

3.  Chromatin Viscoelasticity Measured by Local Dynamic Analysis.

Authors:  Anat Vivante; Irena Bronshtein; Yuval Garini
Journal:  Biophys J       Date:  2020-04-14       Impact factor: 4.033

4.  Fibroblast rejuvenation by mechanical reprogramming and redifferentiation.

Authors:  Bibhas Roy; Luezhen Yuan; Yaelim Lee; Aradhana Bharti; Aninda Mitra; G V Shivashankar
Journal:  Proc Natl Acad Sci U S A       Date:  2020-04-29       Impact factor: 11.205

Review 5.  Cytoskeletal proteins in the cell nucleus: a special nuclear actin perspective.

Authors:  Piergiorgio Percipalle; Maria Vartiainen
Journal:  Mol Biol Cell       Date:  2019-07-15       Impact factor: 4.138

Review 6.  Effects of extracellular matrix viscoelasticity on cellular behaviour.

Authors:  Ovijit Chaudhuri; Justin Cooper-White; Paul A Janmey; David J Mooney; Vivek B Shenoy
Journal:  Nature       Date:  2020-08-26       Impact factor: 49.962

Review 7.  The Role of Stiffness in Cell Reprogramming: A Potential Role for Biomaterials in Inducing Tissue Regeneration.

Authors:  Michele d'Angelo; Elisabetta Benedetti; Maria Grazia Tupone; Mariano Catanesi; Vanessa Castelli; Andrea Antonosante; Annamaria Cimini
Journal:  Cells       Date:  2019-09-05       Impact factor: 6.600

Review 8.  Advanced Strategies for 3D Bioprinting of Tissue and Organ Analogs Using Alginate Hydrogel Bioinks.

Authors:  Qiqi Gao; Byoung-Soo Kim; Ge Gao
Journal:  Mar Drugs       Date:  2021-12-15       Impact factor: 5.118

  8 in total

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