| Literature DB >> 30550622 |
Yuanjie Pang1, Michael V Holmes1,2,3, Zhengming Chen1,2, Christiana Kartsonaki1,2.
Abstract
We aimed to review the epidemiologic literature examining lifestyle and metabolic risk factors, and blood-based biomarkers including multi-omics (genomics, proteomics, and metabolomics) and to discuss how these predictive markers can inform early diagnosis of pancreatic ductal adenocarcinoma (PDAC). A search of the PubMed database was conducted in June 2018 to review epidemiologic studies of (i) lifestyle and metabolic risk factors for PDAC, genome-wide association studies, and risk prediction models incorporating these factors and (ii) blood-based biomarkers for PDAC (conventional diagnostic markers, metabolomics, and proteomics). Prospective cohort studies have reported at least 20 possible risk factors for PDAC, including smoking, heavy alcohol drinking, adiposity, diabetes, and pancreatitis, but the relative risks and population attributable fractions of individual risk factors are small (mostly < 10%). High-throughput technologies have continued to yield promising genetic, metabolic, and protein biomarkers in addition to conventional biomarkers such as carbohydrate antigen 19-9. Nonetheless, most studies have utilized a hospital-based case-control design, and the diagnostic accuracy is low in studies that collected pre-diagnostic samples. Risk prediction models incorporating lifestyle and metabolic factors as well as other clinical parameters have shown good discrimination and calibration. Combination of traditional risk factors, genomics, and blood-based biomarkers can help identify high-risk populations and inform clinical decisions. Multi-omics investigations can provide valuable insights into disease etiology, but prospective cohort studies that collect pre-diagnostic samples and validation in independent studies are warranted.Entities:
Keywords: biomarkers; early diagnosis; metabolomics; pancreatic ductal adenocarcinoma; proteomics; risk factors
Mesh:
Substances:
Year: 2019 PMID: 30550622 PMCID: PMC6378598 DOI: 10.1111/jgh.14576
Source DB: PubMed Journal: J Gastroenterol Hepatol ISSN: 0815-9319 Impact factor: 4.029
Figure 1Steps towards early diagnosis of pancreatic ductal adenocarcinoma.
Risk prediction models that are currently available include socio‐demographics, lifestyle risk factors, medical history, and, for some, genetic variants. Ideally, biomarkers can be incorporated into these models. The current recommendation is selective screening of individuals at increased risk for PDAC based on their family history or identifiable genetic predisposition.73 The current screening modalities include endoscopic ultrasonography and/or magnetic resonance imaging/magnetic resonance cholangiopancreatography but not biomarkers.73 Lifestyle risk factors including smoking, alcohol, and diet are behavioral factors that are potentially modifiable. Metabolic risk factors, especially those related to the insulin resistance syndrome, are important risk factors for PDAC. These include adiposity, diabetes, hyperglycemia, physical activity, and metabolic syndrome. Other possible risk factors for PDAC are reviewed elsewhere.11 CA 19‐9 is the only conventional biomarker that has been demonstrated to be clinically useful, despite its relatively low sensitivity and specificity. Genomic investigations of PDAC have identified genetic syndromes or mutations in familial PDAC and genetic polymorphisms in sporadic PDAC. Proteomics is the comprehensive characterization of the identity, characteristics, and interactions of the proteins found in individual cellular systems.40 Metabolomics is the comprehensive characterization of small low‐molecular‐weight metabolites in biological samples.41 Both metabolomics and proteomics can provide coverage of metabolites and proteins in much greater quantities than traditional laboratory approaches.
Associations of lifestyle and metabolic risk factors with PDAC from systematic reviews and meta‐analyses
| Reference | Year | Risk factor | Category | No. of studies | No. of cases | Result |
|
|---|---|---|---|---|---|---|---|
| Iodice | 2008 | Smoking | Former | 19 | — | 1.21 (1.10, 1.35) | — |
| Current | 26 | — | 1.70 (1.53, 1.90) | — | |||
| Tramacere | 2010 | Alcohol | < 3 drinks per day | 7 | 4384 | 0.12 (0.86, 0.95) | — |
| ≥ 3 drinks per day | 5 | 797 | 1.30 (1.16, 1.47) | — | |||
| World Cancer Research Fund | 2011 | Alcohol | Per 10 g/day | 9 | 3096 | 1.00 (0.99, 1.01) | 0 |
| High | 9 | 3096 | 1.30 (1.09, 1.54) | 0 | |||
| World Cancer Research Fund | 2011 | Fruit | Per 100 g/day | 5 | 1532 | 1.00 (0.95, 1.05) | 0 |
| World Cancer Research Fund | 2011 | Red meat | 100 | 8 | 2761 | 1.19 (0.98, 1.45) | 52 |
| World Cancer Research Fund | 2011 | Processed meat | 50 | 7 | 2748 | 1.17 (1.01, 1.34) | 0 |
| World Cancer Research Fund | 2011 | Fish | Per 20 g/day | 7 | 3372 | 1.03 (0.97, 1.08) | 0 |
| World Cancer Research Fund | 2011 | Coffee | Per cup per day | 13 | 1460 | 1.02 (0.95, 1.09) | 29 |
| World Cancer Research Fund | 2011 | Saturated fatty acids | Per 10 g/day | 5 | 2740 | 1.11 (1.01, 1.21) | 43 |
| World Cancer Research Fund | 2011 | Fructose | Per 25 g/day | 6 | 2831 | 1.22 (1.08, 1.37) | 0 |
| World Cancer Research Fund | 2011 | Total physical activity | Per 20 MET‐h/day | 3 | 687 | 0.81 (0.64, 1.02) | 0 |
| Leisure‐time physical activity | Per 10 MET‐h/day | 5 | 1315 | 0.99 (0.96, 1.03) | 0 | ||
| Behrens | 2015 | Total physical activity | High | 5 | 1037 | 0.91 (0.69, 1.19) | — |
| Leisure‐time physical activity | High | 18 | 6461 | 0.95 (0.90, 1.01) | — | ||
| Aune | 2012 | BMI | Per 5 kg/m2 | 23 | 9504 | 1.10 (1.07, 1.14) | 19 |
| WC | Per 10 cm | 5 | 949 | 1.11 (1.05, 1.18) | 0 | ||
| WHR | Per 0.1 | 4 | 1047 | 1.19 (1.09, 1.31) | 11 | ||
| Pang | 2017 | Young adult BMI | Per 5 kg/m2 | 5 | 4602 | 1.18 (1.12, 1.24) | 84 |
| World Cancer Research Fund | 2011 | Height | Per 5 cm | 14 | 6147 | 1.07 (1.03, 1.12) | 57 |
| Pang | 2017 | Diabetes | Yes | 22 | 14 211 | 1.52 (1.43, 1.63) | 55 |
| Pang | 2017 | Fasting blood glucose | Per 1 mmol/L | 1 | 139 | 1.11 (1.02, 1.20) | — |
| Random blood glucose | Per 1 mmol/L | 3 | 1451 | 1.15 (1.09, 1.21) | 70 | ||
| Post‐load blood glucose | Per 1 mmol/L | 4 | 576 | 1.13 (1.08, 1.19) | 54 | ||
| Duell | 2012 | Pancreatitis (> 2 years) | Yes | 10 | 5048 | 2.71 (1.96, 3.74) | — |
One drink per day = 12.5 g ethanol. Reference category: nondrinkers and occasional drinkers (< 0.5 drinks per day).
BMI, body mass index; MET, metabolic equivalent of task; PDAC, pancreatic ductal adenocarcinoma; WC, waist circumference; WHR, waist‐to‐hip ratio.
Study information of case–control studies of proteomics and PDAC
| Reference | No. of cases | Platform | Identified biomarker | Diagnostic performance |
|---|---|---|---|---|
| Wingren | 34 | Recombinant antibody microarray platform | A 25‐serum biomarker signature discriminating PDAC from the combined group of HC, CP, and AIP was determined | AUC: PDAC |
| Faca | 13 | Proteomic approach based on extensive protein fractionation | 5 proteins that were upregulated in mouse plasma at the PanIN stage (LCN2, REG1A, REG3, TIMP1, and IGFBP4) together with CA 19.9 | AUC: 5 proteins 0.817 and 5 proteins + CA 19‐9 0.911 |
| Ingvarsson | 24 | Recombinant scFv antibody microarray | A protein signature based on 19 nonredundant analytes | A condensed set of biomarkers consisting of 19 nonredundant serum proteins differed significantly ( |
| Balasenthil | 36 | ELISA | TFPI, TNC‐FN III‐C, and CA 19‐9 | AUC 0.99, sensitivity 90%, and specificity 100% or sensitivity 97.2% and specificity 90% |
| Brand | 160 | The xMAP bead‐based technology | CA 19‐9, ICAM‐1, and OPG; CA 19‐9, CEA, and TIMP1 |
The panel of CA 19‐9, ICAM‐1, and OPG discriminated PDAC from HC with a sensitivity/specificity of 88/90% (AUC = 0.93) |
| Nie | 37 | LC‐MS/MS analysis | 19 and 25 proteins were found to show significant differences in samples between PDAC and other conditions | 7 proteins considered significantly different between PDAC cases and controls, which were further validated by ELISA and lectin‐ELISA |
| Gerdtsson | 156 | 293‐plex recombinant antibody microarrays | PDAC |
A multiplexed biomarker signature of up to 10 serum markers could discriminate PDAC from controls, with sensitivities and specificities in the 91–100% range (AUC = 0.98) |
| Gerdtsson | 118 | Recombinant antibody microarray platform | Properdin, VEGF, IL‐8, complement factor (C3), and CHP‐1 | All PDAC stages could be discriminated from controls and the accuracy increased with disease progression, from stage I to stage IV (AUC): all PDAC |
| Sogawa | 80 | Tandem mass tag labelling and LC‐MS/MS | C4BPA and PIGR | 20 proteins were selected whose serum levels were elevated more than twofold before and after the surgery in three pairs of sera from preoperative and postoperative PDAC patients |
| Yoneyama | 164 | Antibody‐based proteomics and LC‐MS/MS‐based proteomics | IGFBP2 and IGFBP3 | HC |
| Balasenthil | 206 | ELISA | TFPI, TNC‐FN III‐C, and CA 19‐9 | Validation of a functional genomics‐based plasma migration signature biomarker panel |
| Capello | 187 | ELISA | TIMP1, LRG1, and CA 19‐9 | Validation of Faca |
| Liu | 80 | Combined MS‐intensive methods | ApoE, ITIH3, ApoA1, and ApoL1 |
PDAC |
| Park | 401 | LC‐MS/MS | Leucine‐rich α‐2 glycoprotein, transthyretin, and CA 19‐9 | Triplicate analysis to identify a 3‐panel biomarker with sensitivity over 10% greater than that of CA 19‐9 when specificity was fixed to 0.90 |
| Park | 70 | SIS‐MRM‐MS | Apolipoprotein A‐IV, apolipoprotein CIII, insulin‐like growth factor‐binding protein 2, and tissue inhibitor of metalloproteinase 1 | The four proteins were significantly altered in PDAC cases in both the discovery and the validation phase ( |
| Cohen | 221 | The Bioplex 200 platform | ctDNA KRAS mutations and four proteins (CA 19‐9, CEA, hepatocyte growth factor, and osteoponin) | PDAC |
| Cohen | 93 | The Bioplex 200 platform | The presence of a mutation in 1933 distinct genomic positions or elevated levels of any of eight proteins (CA‐125, CEA, CA 19‐9, prolactin, hepatocyte growth factor, osteoponin, myeloperoxidase, and TIMP‐1) | PDAC |
References are shown in the Supporting Information.
AIP, autoimmune pancreatitis; ApoA1, apolipoprotein A‐I; ApoE, apolipoprotein E; ApoL1, apolipoprotein L1; AUC, area under the receiver operating characteristic curve; C4BPA, C4b‐binding protein α‐chain; CA 19‐9, carbohydrate antigen 19‐9; CEA, carcinoembryonic antigen; CHP‐1, calcineurin homologous protein‐1; CP, chronic pancreatitis; ctDNA, circulating tumor DNA; ELISA, enzyme‐linked immunosorbent assay; HC, healthy control; ICAM‐1, intercellular adhesion molecule 1; IDACP, invasive ductal adenocarcinoma of pancreas; IGFBP, insulin‐like growth factor‐binding protein; IL, interleukin; ITIH3, inter‐α‐trypsin inhibitor heavy chain H3; LC‐MS/MS, liquid chromatography–tandem mass spectrometry; OPD, other pancreatic disease; OPG, osteoprotegerin; PDAC, pancreatic ductal adenocarcinoma; PIGR, polymeric immunoglobulin receptor; SIS‐MRM‐MS, stable isotope dilution–multiple reaction monitoring–mass spectrometry; TFPI, tissue factor pathway inhibitor; TIMP1, tissue inhibitor of metalloproteinase 1; TNC, tenascin C; TNF‐α, tumor necrosis factor; VEGF, vascular endothelial growth factor.
Study information of prospective studies of proteomics and metabolomics with PDAC
| Reference | Study population | No. of cases | Platform | Identified biomarker | Diagnostic performance | Validation |
|---|---|---|---|---|---|---|
| Proteomics | ||||||
| Nolen | Incident PDAC cases ( | 135 | Multiplexed bead‐based immunoassays | CA 19‐9, CEA, and Cyfra 21‐1 | In the entire PLCO set, at 95% specificity, a panel of CA 19‐9, CEA, and Cyfra 21‐1 provided significantly elevated sensitivity of 32.4% and 29.7% in samples collected < 1 and ≥ 1 year prior to diagnosis (AUC 0.69 | A training/validation study using alternate halves of the PLCO set failed to identify a biomarker panel with significantly improved performance over CA 19‐9 alone |
| Mirus |
Diagnostic samples: PDAC ( | 87 | Customized antibody microarray platform | ERBB2, TNC, and ESR1 |
Diagnostic samples: 3‐marker panel: AUC 0.86 (0.76–0.96) | Pre‐diagnostic cohort: AUC 0.68 (0.58–0.77), with 30% sensitivity at 90% specificity |
| Jenkinson |
PDAC up to 4 years prior to diagnosis ( | 174 | iTRAQ | TSP‐1 | TSP‐1: a significant reduction in levels of TSP‐1 up to 24 months prior to diagnosis |
Comparing PDAC and controls, a combination of TSP‐1 and CA 19‐9 gave an AUC of 0.85, significantly outperforming both markers alone (0.69 and 0.77) |
| Metabolomics | ||||||
| Mayers | 4 prospective cohorts (HPFS, PHS, WHI‐OS, and NHS): 453 PDAC patients and 898 matched controls | 453 | LC‐MS | Isoleucine, leucine, and valine | HR per SD: isoleucine 1.30 (1.15, 1.48); leucine 1.31 (1.14, 1.50); valine 1.23 (1.09, 1.39); and total 1.30 (1.14, 1.48) | NA |
| Nakagawa | A nested case–control study in the prospective JPHC: incident PDAC ( | 170 | GC‐MS/MS | 1,5‐AG and methionine | OR (Q4 | NA |
| Shu | A nested case–control study in the prospective SMHS and SWHS: incident PDAC ( | 226 | GC‐MS/UPLC‐MS |
10 metabolites: Tetracosanoic acid |
OR per 1‐SD: | NA |
1,5‐AG, 1,5‐anhydroglucitol; AUC, area under the receiver operating characteristic curve; CA 19‐9, carbohydrate antigen 19‐9; CEA, carcinoembryonic antigen; CP, chronic pancreatitis; ELISA, enzyme‐linked immunosorbent assay; ERBB2, v‐erb‐b2 erythroblastic leukemia viral oncogene homolog 2; ESR1, estrogen receptor 1; GC‐MS/MS, gas chromatography–tandem mass spectrometry; HC, healthy control; HPFS, Health Professionals Follow‐up Study; HR, hazard ratio; iTRAQ, isobaric tag for relative and absolute quantitation; JPHC, Japan Public Health Center‐based Prospective Study; LC‐MS, liquid chromatography–mass spectrometry; NA, not applicable; NHS, Nurses' Health Study; OR, odds ratio; PC, phosphatidylcholine; PDAC, pancreatic ductal adenocarcinoma; PE, phosphatidylethanolamine; PHS, Physicians' Health Study; PLCO, Prostate, Lung, Colorectal, and Ovarian Cancer; PS, phosphatidylserine; TNC, tenascin C; TSP‐1, thrombospondin‐1; UPLC‐MS, ultra‐performance liquid chromatography–mass spectrometry; WHI, Women's Health Initiative, WHI‐OS, Women's Health Initiative Observational Study.
Study information of PDAC risk prediction
| Reference | Study population | No. of cases | Predictor | Diagnostic performance in the training set | Diagnostic performance in the validation set |
|---|---|---|---|---|---|
| High‐risk population | |||||
| Risch | A representative case–control study in Connecticut including 362 newly diagnosed PDAC cases and 690 matched controls | 362 | Current smoking, current use of PPI, anti‐heartburn medications, recent diagnosis of diabetes, recent diagnosis of pancreatitis, Jewish ancestry, and non‐O blood group | 5‐year absolute risk calculated from the SEER data | NA |
| Boursi | 109 385 individuals with incident diabetes after the age of 35 years and 3 or more years of follow‐up after diagnosis of diabetes | 390 | Age, BMI, change in BMI, smoking, proton pump inhibitors, antidiabetic medications, hemoglobin A1C, cholesterol, hemoglobin, creatinine, and alkaline phosphatase |
AUC: 0.82 (95% CI 0.75, 0.89) | Internal validation by bootstrap: negligible optimism according to Harrell's algorithm: 0.0003 (95% CI −0.0057, 0.0057) |
| General population | |||||
| Kim | 738 953 men over a period of 10‐year follow‐up in the Health Professionals' Follow‐up Study | 96 | Smoking, history of diabetes, and vegetables consumption | Validation of the Harvard Cancer Risk Index |
Discrimination: AUC 0.72 (0.67, 0.77) |
| Klein | 3349 cases and 3654 controls from the PanScan I–III Consortium of European ancestry (12 nested case–control studies and 8 case–control studies) | 3349 | Smoking, heavy alcohol use, obesity, diabetes > 3 years, family history of PDAC, and non‐O ABO genotype |
AUC: nongenetic factors 0.58 (0.56, 0.60), genetic factors 0.57 (0.55, 0.59), and both nongenetic and genetic factors 0.61 (0.58, 0.63) | NA |
| Hippisley‐Cox and Coupland/2015/UK | Routinely collected data from 753 QResearch general practices in England: 4.96 million patients aged 25–84 years in the derivation cohort and 1.64 million in the validation cohort | 7119 |
Men: age, BMI, Townsend score, smoking, chronic pancreatitis, diabetes, and blood cancer | NA |
Discrimination: AUC men 0.857 (95% CI 0.847, 0.867); AUC women 0.865 (0.855, 0.875) |
| Yu | 1 289 933 men and 557 701 women in Korea who had biennial examinations in 1996–1997 with an 8‐year follow‐up and 500 046 men and 627 629 women who had biennial examinations in 1998–1999 in the validation cohort | 2195 |
Men: age, height, BMI, fasting glucose, urine glucose, smoking, and age at smoking initiation | NA |
Discrimination: AUC: men 0.813 (95% CI 0.800, 0.826); AUC women 0.804 (0.788, 0.820) |
The O/E ratio represents the age‐standardized incidence ratio for the group of individuals within the Risk Index RR category, standardized using observed 10‐year age‐specific incidence rates in the cohort. In all studies, diagnosis of PDAC was ascertained by medical records and the International Classification of Diseases code.
The SEER data provide the average age‐specific and sex‐specific probabilities of developing PDAC for populations covered by the SEER registries.
AUC, area under the receiver operating characteristic curve; BMI, body mass index; CI, confidence interval; NA, not applicable; PDAC, pancreatic ductal adenocarcinoma; PPI, proton‐pump inhibitor; RR, relative risk; SEER, Surveillance Epidemiology and End Results.