Literature DB >> 30541934

Impact of Rapid Molecular Diagnostic Testing of Respiratory Viruses on Outcomes of Adults Hospitalized with Respiratory Illness: a Multicenter Quasi-experimental Study.

Nasir Wabe1, Ling Li2, Robert Lindeman3, Ruth Yimsung3, Maria R Dahm2, Susan McLennan3,4, Kate Clezy5, Johanna I Westbrook2, Andrew Georgiou2.   

Abstract

A standard multiplex PCR offers comprehensive testing for respiratory viruses. However, it has traditionally been performed in a referral laboratory with a lengthy turnaround time, which can reduce patient flow through the hospital. We aimed to determine whether the introduction of a rapid PCR, but with limited targets (Cepheid Xpert Flu/RSV XC), was associated with improved outcomes for adults hospitalized with respiratory illness. A controlled quasi-experimental study was conducted across three hospitals in New South Wales, Australia. Intervention groups received standard multiplex PCR during the preimplementation, July to December 2016 (n = 953), and rapid PCR during the postimplementation, July to December 2017 (n = 1,209). Control groups (preimplementation, n = 937, and postimplementation, n = 1,102) were randomly selected from adults hospitalized with respiratory illness during the same periods. The outcomes were hospital length of stay (LOS) and microbiology test utilization (blood culture, urine culture, sputum culture, and respiratory bacterial and virus serologies). The introduction of rapid PCR was associated with a nonsignificant 8.9-h reduction in median LOS (95% confidence interval [CI], -21.5 h to 3.7 h; P = 0.17) for all patients and a significant 21.5-h reduction in median LOS (95% CI, -36.8 h to -6.2 h; P < 0.01) among patients with positive test results in an adjusted difference-in-differences analysis. For patients receiving test results before disposition, rapid PCR use was associated with a significant reduction in LOS, irrespective of test results. Compared with standard PCR testing, rapid PCR use was significantly associated with fewer blood culture (adjusted odds ratio [aOR], 0.67; 95% CI, 0.5 to 0.82; P < 0.001), sputum culture (aOR, 0.56; 95% CI, 0.47 to 0.68, P < 0.001), bacterial serology (aOR, 0.44; 95% CI, 0.35 to 0.55, P < 0.001) and viral serology (aOR, 0.42; 95% CI, 0.33 to 0.53, P < 0.001) tests, but not with fewer urine culture tests (aOR, 0.94; 95% CI, 0.78 to 1.12, P = 0.48). Rapid PCR testing of adults hospitalized with respiratory illnesses can deliver benefits to patients and reduce resource utilization. Future research should consider a formal economic analysis and assess its potential impacts on clinical decision making.
Copyright © 2019 American Society for Microbiology.

Entities:  

Keywords:  influenza; molecular diagnostic; rapid PCR; respiratory viruses

Mesh:

Year:  2019        PMID: 30541934      PMCID: PMC6440765          DOI: 10.1128/JCM.01727-18

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN: 0095-1137            Impact factor:   5.948


  29 in total

1.  Research designs for studies evaluating the effectiveness of change and improvement strategies.

Authors:  M Eccles; J Grimshaw; M Campbell; C Ramsay
Journal:  Qual Saf Health Care       Date:  2003-02

2.  Evaluation of the Cepheid Xpert Flu Assay for rapid identification and differentiation of influenza A, influenza A 2009 H1N1, and influenza B viruses.

Authors:  S M Novak-Weekley; E M Marlowe; M Poulter; D Dwyer; D Speers; W Rawlinson; C Baleriola; C C Robinson
Journal:  J Clin Microbiol       Date:  2012-02-29       Impact factor: 5.948

3.  Impact of a rapid respiratory panel test on patient outcomes.

Authors:  Beverly B Rogers; Prabhu Shankar; Robert C Jerris; David Kotzbauer; Evan J Anderson; J Renee Watson; Lauren A O'Brien; Francine Uwindatwa; Kelly McNamara; James E Bost
Journal:  Arch Pathol Lab Med       Date:  2014-08-25       Impact factor: 5.534

Review 4.  Economic Evidence and Point-of-Care Testing.

Authors:  Andrew St John; Christopher P Price
Journal:  Clin Biochem Rev       Date:  2013-08

5.  Estimating the economic impact of a half-day reduction in length of hospital stay among patients with community-acquired pneumonia in the US.

Authors:  M Raut; J Schein; S Mody; R Grant; C Benson; W Olson
Journal:  Curr Med Res Opin       Date:  2009-09       Impact factor: 2.580

6.  Impact of Early Detection of Respiratory Viruses by Multiplex PCR Assay on Clinical Outcomes in Adult Patients.

Authors:  Urania Rappo; Audrey N Schuetz; Stephen G Jenkins; David P Calfee; Thomas J Walsh; Martin T Wells; James P Hollenberg; Marshall J Glesby
Journal:  J Clin Microbiol       Date:  2016-05-25       Impact factor: 5.948

7.  Limitations of CBA study: Controlled before after study.

Authors:  Anjali Mahajan
Journal:  Lung India       Date:  2015 Nov-Dec

8.  Economic Impact of a New Rapid PCR Assay for Detecting Influenza Virus in an Emergency Department and Hospitalized Patients.

Authors:  Marcelo Soto; Laura Sampietro-Colom; Anna Vilella; Efraín Pantoja; María Asenjo; Ruth Arjona; Juan Carlos Hurtado; Antoni Trilla; Míriam José Alvarez-Martínez; Aurea Mira; Jordi Vila; María Angeles Marcos
Journal:  PLoS One       Date:  2016-01-20       Impact factor: 3.240

Review 9.  Global, regional, and national disease burden estimates of acute lower respiratory infections due to respiratory syncytial virus in young children in 2015: a systematic review and modelling study.

Authors:  Ting Shi; David A McAllister; Katherine L O'Brien; Eric A F Simoes; Shabir A Madhi; Bradford D Gessner; Fernando P Polack; Evelyn Balsells; Sozinho Acacio; Claudia Aguayo; Issifou Alassani; Asad Ali; Martin Antonio; Shally Awasthi; Juliet O Awori; Eduardo Azziz-Baumgartner; Henry C Baggett; Vicky L Baillie; Angel Balmaseda; Alfredo Barahona; Sudha Basnet; Quique Bassat; Wilma Basualdo; Godfrey Bigogo; Louis Bont; Robert F Breiman; W Abdullah Brooks; Shobha Broor; Nigel Bruce; Dana Bruden; Philippe Buchy; Stuart Campbell; Phyllis Carosone-Link; Mandeep Chadha; James Chipeta; Monidarin Chou; Wilfrido Clara; Cheryl Cohen; Elizabeth de Cuellar; Duc-Anh Dang; Budragchaagiin Dash-Yandag; Maria Deloria-Knoll; Mukesh Dherani; Tekchheng Eap; Bernard E Ebruke; Marcela Echavarria; Carla Cecília de Freitas Lázaro Emediato; Rodrigo A Fasce; Daniel R Feikin; Luzhao Feng; Angela Gentile; Aubree Gordon; Doli Goswami; Sophie Goyet; Michelle Groome; Natasha Halasa; Siddhivinayak Hirve; Nusrat Homaira; Stephen R C Howie; Jorge Jara; Imane Jroundi; Cissy B Kartasasmita; Najwa Khuri-Bulos; Karen L Kotloff; Anand Krishnan; Romina Libster; Olga Lopez; Marilla G Lucero; Florencia Lucion; Socorro P Lupisan; Debora N Marcone; John P McCracken; Mario Mejia; Jennifer C Moisi; Joel M Montgomery; David P Moore; Cinta Moraleda; Jocelyn Moyes; Patrick Munywoki; Kuswandewi Mutyara; Mark P Nicol; D James Nokes; Pagbajabyn Nymadawa; Maria Tereza da Costa Oliveira; Histoshi Oshitani; Nitin Pandey; Gláucia Paranhos-Baccalà; Lia N Phillips; Valentina Sanchez Picot; Mustafizur Rahman; Mala Rakoto-Andrianarivelo; Zeba A Rasmussen; Barbara A Rath; Annick Robinson; Candice Romero; Graciela Russomando; Vahid Salimi; Pongpun Sawatwong; Nienke Scheltema; Brunhilde Schweiger; J Anthony G Scott; Phil Seidenberg; Kunling Shen; Rosalyn Singleton; Viviana Sotomayor; Tor A Strand; Agustinus Sutanto; Mariam Sylla; Milagritos D Tapia; Somsak Thamthitiwat; Elizabeth D Thomas; Rafal Tokarz; Claudia Turner; Marietjie Venter; Sunthareeya Waicharoen; Jianwei Wang; Wanitda Watthanaworawit; Lay-Myint Yoshida; Hongjie Yu; Heather J Zar; Harry Campbell; Harish Nair
Journal:  Lancet       Date:  2017-07-07       Impact factor: 79.321

10.  Routine molecular point-of-care testing for respiratory viruses in adults presenting to hospital with acute respiratory illness (ResPOC): a pragmatic, open-label, randomised controlled trial.

Authors:  Nathan J Brendish; Ahalya K Malachira; Lawrence Armstrong; Rebecca Houghton; Sandra Aitken; Esther Nyimbili; Sean Ewings; Patrick J Lillie; Tristan W Clark
Journal:  Lancet Respir Med       Date:  2017-04-06       Impact factor: 30.700

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  12 in total

1.  Impact of Rapid Molecular Detection of Respiratory Viruses on Clinical Outcomes and Patient Management.

Authors:  Jane Kuypers
Journal:  J Clin Microbiol       Date:  2019-03-28       Impact factor: 5.948

Review 2.  Clinical Utility of Advanced Microbiology Testing Tools.

Authors:  Melissa B Miller; Faranak Atrzadeh; C A Burnham; Stephen Cavalieri; James Dunn; Stephen Jones; Charles Mathews; Peggy McNult; John Meduri; Chris Newhouse; Duane Newton; Michael Oberholzer; John Osiecki; David Pedersen; Nicole Sweeney; Natalie Whitfield; Joe Campos
Journal:  J Clin Microbiol       Date:  2019-08-26       Impact factor: 5.948

3.  Opportunities Revealed for Antimicrobial Stewardship and Clinical Practice with Implementation of a Rapid Respiratory Multiplex Assay.

Authors:  Zoe F Weiss; Cheston B Cunha; Alison B Chambers; Audrey V Carr; Cleo Rochat; Mariska Raglow-Defranco; Diane M Parente; Aimee Angus; Leonard A Mermel; Latha Sivaprasad; Kimberle Chapin
Journal:  J Clin Microbiol       Date:  2019-09-24       Impact factor: 5.948

4.  Timing of respiratory virus molecular testing in emergency departments and its association with patient care outcomes: a retrospective observational study across six Australian hospitals.

Authors:  Nasir Wabe; Ling Li; Maria R Dahm; Robert Lindeman; Ruth Yimsung; Kate Clezy; Judith Thomas; Wayne Varndell; Johanna Westbrook; Andrew Georgiou
Journal:  BMJ Open       Date:  2019-08-08       Impact factor: 2.692

Review 5.  Cost-Effective Respiratory Virus Testing.

Authors:  B A Pinsky; R T Hayden
Journal:  J Clin Microbiol       Date:  2019-08-26       Impact factor: 5.948

6.  Differences in antibiotic and antiviral use in people with confirmed influenza: a retrospective comparison of rapid influenza PCR and multiplex respiratory virus PCR tests.

Authors:  Victor Au Yeung; Kiran Thapa; William Rawlinson; Andrew Georgiou; Jeffrey J Post; Kristen Overton
Journal:  BMC Infect Dis       Date:  2021-04-07       Impact factor: 3.090

7.  Impact of on-site compared to off-site testing for severe acute respiratory coronavirus virus 2 (SARS-CoV-2) on duration of isolation and resource utilization.

Authors:  Maryza Graham; Benjamin A Rogers; Andrew T Roberts; Gabriella Wong; Despina Kotsanas; Michelle J Francis; Rhonda L Stuart
Journal:  Infect Control Hosp Epidemiol       Date:  2020-08-24       Impact factor: 3.254

8.  Diagnostic stewardship aiming at expectorated or induced sputum promotes microbial diagnosis in community-acquired pneumonia.

Authors:  Jan Kristian Damås; Lars Heggelund; Bjørn Waagsbø; Eva Margrethe Buset; Jørn-Åge Longva; Merete Bjerke; Birgitte Bakkene; Anne-Stine Ertesvåg; Hanne Holmen; Marko Nikodojevic; To Thy Tran; Andreas Christensen; Einar Nilsen
Journal:  BMC Infect Dis       Date:  2022-03-02       Impact factor: 3.090

9.  Correlation between Sputum Bacterial Culture Positive Rate and Drug Sensitivity Test Results and Disease Severity inInpatients and Its Clinical Significance: A SystematicReview and Meta-Analysis.

Authors:  Wenjing Zhou; Jing Li
Journal:  Comput Intell Neurosci       Date:  2022-07-14

10.  Cepheid Xpert® Flu/RSV and Seegene Allplex RP1 show high diagnostic agreement for the detection of influenza A/B and respiratory syncytial viruses in clinical practice.

Authors:  Nasir Wabe; Robert Lindeman; Jeffrey J Post; William Rawlinson; Melissa Miao; Johanna I Westbrook; Andrew Georgiou
Journal:  Influenza Other Respir Viruses       Date:  2020-08-20       Impact factor: 5.606

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