Literature DB >> 3054124

Use of tRNA suppressors to probe regulation of Escherichia coli release factor 2.

J F Curran1, M Yarus.   

Abstract

It has been suggested that Escherichia coli release factor 2 (RF-2) translation is autoregulated. Mature RF-2 protein can terminate its own nascent synthesis at an intragenic, in-phase UGA codon, or alternatively, a +1 frameshift can occur that leads to completion of the RF-2 polypeptide. Translational termination presumably increases with RF-2 concentration, providing negative regulatory feedback. We now show, in lacZ/RF-2 fusions, that translation of a UAG codon at the position of the UGA competes with frameshifting, which proves one postulate of the translational autoregulatory model. We also identify a nearby sequence that is required for high-frequency frameshifting and suggest a constraint for the codon preceding the shift point. Both these sequences are incorporated into a model for frameshifting. Our measurements allow us to compute the relative rates in vivo of these reactions: release factor action, frameshifting and tRNA selection at an amber codon.

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Year:  1988        PMID: 3054124     DOI: 10.1016/0022-2836(88)90092-7

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  51 in total

1.  Programmed +1 frameshifting stimulated by complementarity between a downstream mRNA sequence and an error-correcting region of rRNA.

Authors:  Z Li; G Stahl; P J Farabaugh
Journal:  RNA       Date:  2001-02       Impact factor: 4.942

2.  Suppression of eukaryotic translation termination by selected RNAs.

Authors:  J Carnes; L Frolova; S Zinnen; G Drugeon; M Phillippe; J Justesen; A L Haenni; L Leinwand; L L Kisselev; M Yarus
Journal:  RNA       Date:  2000-10       Impact factor: 4.942

3.  Reversal of inhibition by the T7 concatemer junction sequence on expression from a downstream T7 promoter.

Authors:  L Cheng; E Goldman
Journal:  Gene Expr       Date:  2001

4.  Maintenance of the correct open reading frame by the ribosome.

Authors:  Thomas M Hansen; Pavel V Baranov; Ivaylo P Ivanov; Raymond F Gesteland; John F Atkins
Journal:  EMBO Rep       Date:  2003-05       Impact factor: 8.807

5.  Natural selection and the frequency distributions of "silent" DNA polymorphism in Drosophila.

Authors:  H Akashi; S W Schaeffer
Journal:  Genetics       Date:  1997-05       Impact factor: 4.562

6.  Genetic analysis of the basis of translation in the -1 frame of an unusual non-ORF sequence isolated from phage display.

Authors:  Jennifer Zemsky; Wlodek Mandecki; Emanuel Goldman
Journal:  Gene Expr       Date:  2002

7.  Inhibition of translation by consecutive rare leucine codons in E. coli: absence of effect of varying mRNA stability.

Authors:  Ping Shu; Huacheng Dai; Wenwu Gao; Emanuel Goldman
Journal:  Gene Expr       Date:  2006

8.  Genetic analysis of the E site during RF2 programmed frameshifting.

Authors:  Christina L Sanders; James F Curran
Journal:  RNA       Date:  2007-07-27       Impact factor: 4.942

9.  Cis control of gene expression in E.coli by ribosome queuing at an inefficient translational stop signal.

Authors:  Haining Jin; Asgeir Björnsson; Leif A Isaksson
Journal:  EMBO J       Date:  2002-08-15       Impact factor: 11.598

10.  Special peptidyl-tRNA molecules can promote translational frameshifting without slippage.

Authors:  A Vimaladithan; P J Farabaugh
Journal:  Mol Cell Biol       Date:  1994-12       Impact factor: 4.272

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