| Literature DB >> 30532667 |
Prabhpreet Kaur1, Gurvinder Singh1, Parminder Kaur1.
Abstract
BACKGROUND: This paper attempts to identify suitable Machine Learning (ML) approach for image denoising of radiology based medical application. The Identification of ML approach is based on (i) Review of ML approach for denoising (ii) Review of suitable Medical Denoising approach. DISCUSSION: The review focuses on six application of radiology: Medical Ultrasound (US) for fetus development, US Computer Aided Diagnosis (CAD) and detection for breast, skin lesions, brain tumor MRI diagnosis, X-Ray for chest analysis, Breast cancer using MRI imaging. This survey identifies the ML approach with better accuracy for medical diagnosis by radiologists. The image denoising approaches further includes basic filtering techniques, wavelet medical denoising, curvelet and optimization techniques. In most of the applications, the machine learning performance is better than the conventional image denoising techniques. For fast and computational results the radiologists are using the machine learning methods on MRI, US, X-Ray and Skin lesion images. The characteristics and contributions of different ML approaches are considered in this paper.Entities:
Keywords: Image denoising; classifiers; curvelets; data mining methods; filtering techniques; ultrasound; wavelets
Year: 2018 PMID: 30532667 PMCID: PMC6225344 DOI: 10.2174/1573405613666170428154156
Source DB: PubMed Journal: Curr Med Imaging Rev ISSN: 1573-4056
Fig. (1)Analysis of Denoising Medical Images using Data Mining Tools [2].
Fig. (2)Example of analysis of US CAD and detection of breast.
Analysis of denoising filtering techniques.
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| Homomorphic Wavelet [ | Threshold can be extended that gives better result | Reduce speckle noise | Complex technique |
| Soft Thresholding [ | “Optimal recover model and Statistical inference” | Reduce as well as smooth the noise | Large threshold cuts the coefficients |
| Non Homomorphic [ | Relies on characterization of the marginal statics of the signal and speckle wavelet coefficients | Reduce the computational complexity of filtering method | Not a robust method for estimation distribution parameters |
| Adaptive wavelet domain Bayesian processor [ | Combines the MAP estimation with correlated speckle noise | Speckle noise suppressed and remaining structure of image is not effected | Not effective technique |
| Wavelet based statistical [ | Use realistic distribution of wavelet coefficients | Feature preserve, better for medical images, fast computation | Highly complex |
| Versatile technique for visual enhancement [ | Combining MAP and speckle and signal wavelet coefficients | High correlation and structure similar and quality index | Cover only medical images not other |
| Wavelet thresholding (normal shrink) [ | Sub band adaptive threshold | Normal shrink is faster as compare to bayes shrink | Need to reduce the number of bits while using normal shrink |
| Joint optimization quantization and wavelet packets (JTQ-WP) [ | Covers both us images and natural images | Highly compressed approach | Cost function is high |
| Curvelet and contourlet | Noise improvement rectangle | High PSNR can be achieved | Consider only Gaussian noise not other noises |
Representing benign and malignant BI-RADS features.
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| Shape | Oval | Irregular and Round |
| Orientation | Parallel to skin | Not parallel to skin |
| Margin | Circumscribed | Microlobulated, Indistinct, Angular, Spiculated |
| Echo Pattern | Abrupt interface | Echogenic halo |
| Posterior Feature | - | Shadowing, Combined pattern |
Data mining method.
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| Decision Tree | Low complexity | Accuracy depends on the design of the features and tree |
| Artificial Neural Network | Robustness and widely applicable | Initial value, Long training time |
| Support Vector Machine | Repeatable training process, good performance | Supervised learning, parameter dependent. |
| Random Forest | Resistance to over training, Improve prediction accuracy | Fundamentally discrete, Large number of trees may make the algorithm slow for real-time prediction |
Margin - Margin qualities will be an essential BI-RADS type throughout determining the likelihood of malignancy. This kind of BI-RADS type has several subcategories devoted to different qualities on the cancer mark up, including: “indistinct,' '“angular,' '“microlobulated” and also “spiculated,' 'that are concern features.
Echo pattern - Echo pattern may possibly be determined by checking structure which plays a crucial role from the difference in between lesions on the skin inside and ultrasound imaging.
Review of medical denoising approaches.
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| Title: “Homomorphic wavelet thresholding technique for denoising medical ultrasound images” [ | Image denoising | Novel Homomorphic Wavelet Thresholding | It outperform the most effective wavelet based denoising |
| Title: “De-Noising by Soft-Thresholding” [ | Image denoising | Abstract De-Noising Model | Increases statistical |
| Title: “Robust non-homomorphic approach for speckle reduction in medical ultrasound images” [ | Speckle reduction | Non-Homomorphic technique | Low complexity |
| Title: “Locally adaptive wavelet domain Bayesian processor for denoising medical ultrasound images using Speckle modeling based on Rayleigh distribution” [ | Speckle reduction | Discrete Wavelet Transform, MAP estimator | Suppresses speckle noise effectively |
| Title: “A Wavelet Based Statistical Approach for, Speckle Reduction in Medical Ultrasound Images” [ | Speckle reduction | Novel Multiscale Nonlinear for Speckle Reduction | Fast computation and better diagnosis |
| Title: “A versatile technique for visual enhancement of medical ultrasound images” [ | Visual enhancement of image | Versatile Wavelet Domain despeckling | Provide better performance in speckle smoothing and edge preservation |
| Title: “Wavelet-based statistical approach for speckle reduction in medical ultrasound images” [ | Speckle reduction | Novel Speckle-Reduction | Fast computation and Despeckling |
| Title: “Medical ultrasound image compression using joint optimization of thresholding quantization and best-basis selection of wavelet packets” [ | Image denoising | Image Coding Algorithm | Performance of JTQ-WP coder is concluding better |
| Title: “Performance evaluation of wavelet, ridgelet, curvelet and contourlet transforms based techniques for digital image denoising” [ | Image denoising | X’let transform | Provide effective denoising |
| Title: “Denoising Of Medical Ultrasound Images In Wavelet Domain” | Image denoising | Wavelet Transformation, | Preserves image and visual quality |
| Title: “Image Denoising using Wavelet Thresholding” [ | Image denoising | Adaptive Threshold | Provide smoothness and |
| Title: “Image denoising using curvelet transform: an approach for edge preservation” [ | Image denoising | Soft Thresholding Multiresolution | Improve smoothness |
| Title: “ Ideal spatial adaptation by wavelet shrinkage” [ | Speckle reduction | Signal-dependent Multiplicative Speckle Noise Model, Discrete Wavelet Transform and Modeling of Wavelet Coefficients | Smoothness increases |
Machine learning methods.
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| Title: “Machine Learning and radiology” [ | CAD for breast US, Brain MRI, Content based retrieval CT or MRI, Text Analysis | SVM, Naive Bayes, Neural Networks, Linear Models, Graphs Matching, Cluster Analysis, PCA, kNN. | Costs, Accuracy, Disseminating Expertise | “Reduce cost, Improve Accuracy, Disseminating in short supply” | Machine learning statistical approaches are not defined. | ||||||
| Title: “A Comparative Study of Classification Algorithms in E-Health Environment” [ | Medical Images (E-Health Envirnment) | Classification Algorithms (Bayes Net, Logistic, K Star, Stacking, JRIP, One R,PART, J48, LMT, RF) | Precision, TP “True Positive”, Recall, FP “False Positive”, F-Measure, Time, ROC Area | “ROC Area concludes Random Forest has highest Rate”. | Decision making of classifiers is limited on huge dataset | ||||||
| Title: “Computer-Aided Diagnosis for Breast Ultrasound Using Computerized BI-RADS Features and Machine Learning Methods” [ | CAD for breast Ulrasound | ANN,SVM, | Shape, Orientation, Margin, Echo Pattern, Posterior Feature | “Best ROC performance” | Hybridization of classifiers has been ignored | ||||||
| Title: “Machine Learning Approaches in Medical Image Analysis: From detection to diagnosis” [ | Detection of Diabetic Retinopathy, Brain MRI Images etc | Machine Learning Diagnosis Methods, Imaging Protocols, Labels | Confounding Factors- Age, Gender, Curves Visual Performance | “Train strong Models on little data, Improve access on Data, Best make use of image structure, Properties in designing models” | Theoretical base is explained | ||||||
| Title: “Hybrid Approach for automatic segmentation of fetal abdomen from ultrasound images using deep learning” [ | Ultrasound of Fetal Abdomen | “Convolutional Neural Networks” (CNN), ”Gradient Boosting Machine” (GBM) | “Gray Level Co-Occurrence Matrix” (GLCM), Haar, “ Local Binary Pattern”(LBP)”, “Histogram of Oriented Gradient” (HOG), “Support Vector Machine” (SVM), “Random Forest” (RF) | “HOG feature outperform Haar Features by more than 4%.” | Parameters evaluation is not explained properly. | ||||||
| Title: “A Novel Approach for Classifying Medical Images using Data Mining Techniques” [ | Fundus Images | “k nearest neighbor (kNN), Support Vector Machine(SVM)and Naïve Bayes(NB)” | Discretization Method:Receiver Operating Characteristics(ROC) in terms of accuracy and area | AUC outperform | Data set is limited to only fungus retinal images | ||||||
| Title: “Computer-aided diagnosis of breast masses using quantified BI-RADS findings” [ | Breast CAD US images | “Computer-aided analysis with quantitative information | Specificity, Accuracy, PPV, NPV, pAUC | “CAD quantitative combination (0.96 vs 0.93, p=0.18)” | Use of all tumors in the feature selection process | ||||||
| Title: “Automated breast cancer detection and classification using ultrasound images: A survey” [ | Breast US Images | Filters, Wavelet, Neural Network, Morphological Processing, Classifiers | “Specificity, Accuracy, Sensitivity, Positive predictive value (PPV), Negative predictive value (NPV), Matthew’s correlation coefficient(MCC)” | “Number of NPV and PPV are unbalanced then MCC gives better evaluation then Accuracy.” | Performance Evaluation of the approaches is not described properly. | ||||||
Explored medical denoising and machine learning techniques.
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| Title: “Image denoising using curvelet transform: An approach of edge preserving” [ | 3 different gray scale images: Lena and Barbara with size 512X512 and Cameraman with size 266X256 | Variance Measure, Mean square Error, PSNR value | Bayes Shrink soft thresholding model, Edge preserving smoothing algorithm (SNN filter, MHN filter) | Generalized Gaussian Distribution Modeling of Sub band Coefficients |
| Title: “A Novel Approach for Classifying Medical Images Using Data Mining Techniques” [ | Retinal fundus images of size 576x720 pixels. | Mean, variance, skewness and kurtosis | Classifiers such as SVM, kNN, and NB | Machine Learning classifiers |
| Title: “Automated breast cancer detection and classification using ultrasound images: A survey” [ | Standardized Breast Images | Spiculation, Elipsoid Shape, Branch Pattern, Brightness of Nodule, Margin Echogenity | Filtering, Wavelet approaches, Histogram thresholding, Active Contor Model, MKF, Neural Network, Bayesian Neural Network, Decision Tree, SVM, Template Matching | CAD based System detection |
| Title: “ Image Coding Using Wavelet Transform” [ | “The intensity of each pixel is coded on 256 grey levels (8 bpp), 256 by 256 black and white images.” | Entropy, PSNR | Wavelet Coefficients, Vector Quantization | Machine Learning |
| Title: “An Efficient Denoising Technique for CT Images using Window based Multi-Wavelet Transformation and Thresholding” [ | CT images of size 256X256 | PSNR values computed, Additive White Gaussian Nose removed | Window based Multi-wavelet transformation and thresholding, band pass filtering technique | “Multi-wavelet classification windows based” |
| Title: “A GA-based Window Selection Methodology to Enhance Window-based Multi-wavelet transformation and thresholding aided CT image denoising technique” [ | Industrial CT volume data sets | Number of window selected, Gene length, Mutation Rate, PSNR values | Window based Multi-wavelet transformation and thresholding, Genetic algorithm | Window Based Multi-wavelet classification |
| Title: “Qualitative and Quantitative Evaluation of Image Denoising Techniques”[ | Standardised Images | CoC, PSNR and S/MSE | Various Spatial filters like Median Filter, Lee Filter, Kuan Filter, Wiener Filter, Normal Shrink, Bayes Shrink | Image Denoising Using Spatial Filters |
| Title: “Multilevel Threshold Based Image Denoising in Curvelet Domain” [ | Five thousand images of different image sizes: 64 × 64,128 × 128,256 × 256,512 × 512 and 1024×1024 | Curvelet coefficients, the mean and the median of absolute curvelet coefficients | Curvelet Transformation and Cycle spinning | Curvelet based Thresholding |
| Title: “Digital Image Denoising in Medical Ultrasound Images: A Survey” [ | Ultrasound images | Scattere density, Texture based contrast, MSE, RMSE, SNR, and PSNR | Multi-scale thresholding, Bayesian Estimation and Coefficient correlation, Application of Soft Computing like Artificial Neural Networks (ANN), Genetic Algorithms (GA) and Fuzzy Logic (FL) | Designing better algorithms correlating the Ultrasound image formation concepts and advanced Digital image processing techniques |
| Title: “Adaptive image denoising using cuckoo algorithm” [ | Standard512× 512 images (‘Lena’, ‘Pirate’, ‘Mandrill’) | IQI, VIF, both IQI and PSNR or both IQI and VIF | Cuckoo search algorithm | Comparisson of Cuckoo Search With existing Artificail intelligence techniques |
| Title: “Segmentation and detection of breast cancer in mammograms combining wavelet analysis and genetic algorithm” [ | Database taken from Digital Database for Screening Mammography (DDSM) | “Distribution separation measure, target to background contrast enhancement measurement based on entropy, target to target background contrast enhancement measurement based on standard deviation, combined enhancement measure” | Wavelet transform, genetic algorithm | Artifact removal algorithm fusing gray level enhancement method and image denoising and using wavelet transform and wiener filter |
| Title: “Mixed Curvelet and Wavelet Transforms for Speckle Noise Reduction in Ultrasonic B-Mode Images” [ | Six ultrasonic B-mode images (Liver, Kidney, Fetus, Thyroid, Breast and Gall | PSNR value, Coefficient of Correlation (CoC) | Wavelet and curvelet transform | Wavelet transform handles homogeneous areas while curvelet transform handles areas with edges |
| Title: “Image Denoising Method based on Threshold, Wavelet Transform and Genetic Algorithm” [ | Images of Lena and Saturn Planet | Hard Threshold Function, Soft Threshold function | Wavelet Transform, Genetic Algorithm | Genetic Algorithm |