Literature DB >> 30531949

Non-invasive monitoring of alternative splicing outcomes to identify candidate therapies for myotonic dystrophy type 1.

Ningyan Hu1,2, Layal Antoury1,2, Timothy M Baran3, Soumya Mitra3, C Frank Bennett4, Frank Rigo4, Thomas H Foster3, Thurman M Wheeler5,6.   

Abstract

During drug development, tissue samples serve as indicators of disease activity and pharmacodynamic responses. Reliable non-invasive measures of drug target engagement will facilitate identification of promising new treatments. Here we develop and validate a novel bi-transgenic mouse model of myotonic dystrophy type 1 (DM1) in which expression of either DsRed or GFP is determined by alternative splicing of an upstream minigene that is mis-regulated in DM1. Using a novel in vivo fluorescence spectroscopy system, we show that quantitation of the DsRed/GFP ratio provides an accurate estimation of splicing outcomes in muscle tissue of live mice that nearly doubles throughput over conventional fluorescence imaging techniques. Serial in vivo spectroscopy measurements in mice treated with a C16 fatty acid ligand conjugated antisense (LICA) oligonucleotide reveal a dose-dependent therapeutic response within seven days, confirm a several-week duration of action, and demonstrate a two-fold greater target engagement as compared to the unconjugated parent oligonucleotide.

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Year:  2018        PMID: 30531949      PMCID: PMC6286378          DOI: 10.1038/s41467-018-07517-y

Source DB:  PubMed          Journal:  Nat Commun        ISSN: 2041-1723            Impact factor:   14.919


  60 in total

1.  Analytical model for extracting intrinsic fluorescence in turbid media.

Authors:  J Wu; M S Feld; R P Rava
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Review 2.  Pharmacokinetics, biodistribution and cell uptake of antisense oligonucleotides.

Authors:  Richard S Geary; Daniel Norris; Rosie Yu; C Frank Bennett
Journal:  Adv Drug Deliv Rev       Date:  2015-02-07       Impact factor: 15.470

3.  Myotonic dystrophy in transgenic mice expressing an expanded CUG repeat.

Authors:  A Mankodi; E Logigian; L Callahan; C McClain; R White; D Henderson; M Krym; C A Thornton
Journal:  Science       Date:  2000-09-08       Impact factor: 47.728

4.  Factors influencing tumor response to photodynamic therapy sensitized by intratumor administration of methylene blue.

Authors:  Timothy M Baran; Benjamin R Giesselman; Rui Hu; Merrill A Biel; Thomas H Foster
Journal:  Lasers Surg Med       Date:  2010-10       Impact factor: 4.025

5.  Alternative splicing dysregulation secondary to skeletal muscle regeneration.

Authors:  James P Orengo; Amanda J Ward; Thomas A Cooper
Journal:  Ann Neurol       Date:  2011-03-11       Impact factor: 10.422

6.  Precise small-molecule recognition of a toxic CUG RNA repeat expansion.

Authors:  Suzanne G Rzuczek; Lesley A Colgan; Yoshio Nakai; Michael D Cameron; Denis Furling; Ryohei Yasuda; Matthew D Disney
Journal:  Nat Chem Biol       Date:  2016-12-12       Impact factor: 15.040

7.  RNA interference targeting CUG repeats in a mouse model of myotonic dystrophy.

Authors:  Krzysztof Sobczak; Thurman M Wheeler; Wenli Wang; Charles A Thornton
Journal:  Mol Ther       Date:  2012-11-27       Impact factor: 11.454

8.  RNA toxicity in myotonic muscular dystrophy induces NKX2-5 expression.

Authors:  Ramesh S Yadava; Carla D Frenzel-McCardell; Qing Yu; Varadamurthy Srinivasan; Amy L Tucker; Jack Puymirat; Charles A Thornton; Owen W Prall; Richard P Harvey; Mani S Mahadevan
Journal:  Nat Genet       Date:  2007-12-16       Impact factor: 38.330

9.  The ALS/FTLD-related RNA-binding proteins TDP-43 and FUS have common downstream RNA targets in cortical neurons.

Authors:  Daiyu Honda; Shinsuke Ishigaki; Yohei Iguchi; Yusuke Fujioka; Tsuyoshi Udagawa; Akio Masuda; Kinji Ohno; Masahisa Katsuno; Gen Sobue
Journal:  FEBS Open Bio       Date:  2013-11-20       Impact factor: 2.693

10.  An engineered RNA binding protein with improved splicing regulation.

Authors:  Melissa A Hale; Jared I Richardson; Ryan C Day; Ona L McConnell; Juan Arboleda; Eric T Wang; J Andrew Berglund
Journal:  Nucleic Acids Res       Date:  2018-04-06       Impact factor: 16.971

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  10 in total

1.  Targeted splice sequencing reveals RNA toxicity and therapeutic response in myotonic dystrophy.

Authors:  Matthew K Tanner; Zhenzhi Tang; Charles A Thornton
Journal:  Nucleic Acids Res       Date:  2021-02-26       Impact factor: 16.971

2.  Fluorescence and diffuse reflectance provide similar accuracy in recovering fluorophore concentration at short source-detector separations.

Authors:  Jacob R Roccabruna; Karina G Bridger; Timothy M Baran
Journal:  J Mod Opt       Date:  2022-05-11       Impact factor: 1.293

Review 3.  Molecular Therapies for Myotonic Dystrophy Type 1: From Small Drugs to Gene Editing.

Authors:  Mariapaola Izzo; Jonathan Battistini; Claudia Provenzano; Fabio Martelli; Beatrice Cardinali; Germana Falcone
Journal:  Int J Mol Sci       Date:  2022-04-21       Impact factor: 6.208

Review 4.  Advanced Gene-Targeting Therapies for Motor Neuron Diseases and Muscular Dystrophies.

Authors:  Myrsini Chamakioti; Nikolaos Karantzelis; Stavros Taraviras
Journal:  Int J Mol Sci       Date:  2022-04-27       Impact factor: 6.208

Review 5.  Alternative splicing of neuronal genes: new mechanisms and new therapies.

Authors:  Diane Lipscombe; Eduardo Javier Lopez Soto
Journal:  Curr Opin Neurobiol       Date:  2019-01-28       Impact factor: 6.627

6.  The VEGF-A exon 8 splicing-sensitive fluorescent reporter mouse is a novel tool to assess the effects of splicing regulatory compounds in vivo.

Authors:  M Stevens; E Star; M Lee; E Innes; L Li; E Bowler; S Harper; D O Bates; S Oltean
Journal:  RNA Biol       Date:  2019-08-21       Impact factor: 4.652

7.  Antisense oligonucleotide and adjuvant exercise therapy reverse fatigue in old mice with myotonic dystrophy.

Authors:  Ningyan Hu; Eunjoo Kim; Layal Antoury; Jia Li; Paloma González-Pérez; Seward B Rutkove; Thurman M Wheeler
Journal:  Mol Ther Nucleic Acids       Date:  2020-11-26       Impact factor: 8.886

8.  The Dimeric Form of 1,3-Diaminoisoquinoline Derivative Rescued the Mis-splicing of Atp2a1 and Clcn1 Genes in Myotonic Dystrophy Type 1 Mouse Model.

Authors:  Jun Matsumoto; Masayuki Nakamori; Tatsumasa Okamoto; Asako Murata; Chikara Dohno; Kazuhiko Nakatani
Journal:  Chemistry       Date:  2020-10-06       Impact factor: 5.236

9.  Cell-specific regulation of gene expression using splicing-dependent frameshifting.

Authors:  Jonathan P Ling; Alexei M Bygrave; Clayton P Santiago; Rogger P Carmen-Orozco; Vickie T Trinh; Minzhong Yu; Yini Li; Ying Liu; Kyra D Bowden; Leighton H Duncan; Jeong Han; Kamil Taneja; Rochinelle Dongmo; Travis A Babola; Patrick Parker; Lizhi Jiang; Patrick J Leavey; Jennifer J Smith; Rachel Vistein; Megan Y Gimmen; Benjamin Dubner; Eric Helmenstine; Patric Teodorescu; Theodoros Karantanos; Gabriel Ghiaur; Patrick O Kanold; Dwight Bergles; Ben Langmead; Shuying Sun; Kristina J Nielsen; Neal Peachey; Mandeep S Singh; W Brian Dalton; Fatemeh Rajaii; Richard L Huganir; Seth Blackshaw
Journal:  Nat Commun       Date:  2022-10-01       Impact factor: 17.694

Review 10.  Myotonic dystrophy type 1 drug development: A pipeline toward the market.

Authors:  Marta Pascual-Gilabert; Arturo López-Castel; Ruben Artero
Journal:  Drug Discov Today       Date:  2021-03-31       Impact factor: 7.851

  10 in total

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