Literature DB >> 30526278

The nuclear export of circular RNAs is primarily defined by their length.

Zhengguo Li1,2, Michael G Kearse3, Chuan Huang1,2.   

Abstract

Although it was long assumed that eukaryotic pre-mRNAs are almost always spliced to generate linear mRNAs, it is now clear that thousands of protein-coding genes can be non-canonically spliced using backsplicing to produce circular RNAs (circRNAs). Most mature circRNAs accumulate in the cytoplasm; however, little is known about how circRNAs are exported from the nucleus to the cytoplasm as they lack many of the common signals used for mRNA export. In this point-of-view article, we will discuss our recently identified circRNA nuclear export pathway and address important open questions in the field.

Keywords:  Hel25E; UAP56; URH49; biogenesis; circRNA; function; nuclear export

Mesh:

Substances:

Year:  2018        PMID: 30526278      PMCID: PMC6380329          DOI: 10.1080/15476286.2018.1557498

Source DB:  PubMed          Journal:  RNA Biol        ISSN: 1547-6286            Impact factor:   4.652


  43 in total

1.  RNA length defines RNA export pathway.

Authors:  Kaoru Masuyama; Ichiro Taniguchi; Naoyuki Kataoka; Mutsuhito Ohno
Journal:  Genes Dev       Date:  2004-08-16       Impact factor: 11.361

2.  hnRNP C tetramer measures RNA length to classify RNA polymerase II transcripts for export.

Authors:  Asako McCloskey; Ichiro Taniguchi; Kaori Shinmyozu; Mutsuhito Ohno
Journal:  Science       Date:  2012-03-30       Impact factor: 47.728

3.  Recruitment of the human TREX complex to mRNA during splicing.

Authors:  Seiji Masuda; Rita Das; Hong Cheng; Ed Hurt; Nijsje Dorman; Robin Reed
Journal:  Genes Dev       Date:  2005-07-01       Impact factor: 11.361

Review 4.  Nuclear export of RNA: Different sizes, shapes and functions.

Authors:  Tobias Williams; Linh H Ngo; Vihandha O Wickramasinghe
Journal:  Semin Cell Dev Biol       Date:  2017-09-01       Impact factor: 7.727

5.  The closely related RNA helicases, UAP56 and URH49, preferentially form distinct mRNA export machineries and coordinately regulate mitotic progression.

Authors:  Tomohiro Yamazaki; Naoko Fujiwara; Hiroko Yukinaga; Miki Ebisuya; Takuya Shiki; Tomoya Kurihara; Noriyuki Kioka; Taiho Kambe; Masaya Nagao; Eisuke Nishida; Seiji Masuda
Journal:  Mol Biol Cell       Date:  2010-06-23       Impact factor: 4.138

6.  Genome-wide analysis of mRNAs regulated by the THO complex in Drosophila melanogaster.

Authors:  Jan Rehwinkel; Andrea Herold; Kerstin Gari; Thomas Köcher; Michaela Rode; Francesca L Ciccarelli; Matthias Wilm; Elisa Izaurralde
Journal:  Nat Struct Mol Biol       Date:  2004-05-09       Impact factor: 15.369

7.  Genome-wide analysis of nuclear mRNA export pathways in Drosophila.

Authors:  Andrea Herold; Luis Teixeira; Elisa Izaurralde
Journal:  EMBO J       Date:  2003-05-15       Impact factor: 11.598

8.  Circular RNAs are the predominant transcript isoform from hundreds of human genes in diverse cell types.

Authors:  Julia Salzman; Charles Gawad; Peter Lincoln Wang; Norman Lacayo; Patrick O Brown
Journal:  PLoS One       Date:  2012-02-01       Impact factor: 3.240

9.  FUS affects circular RNA expression in murine embryonic stem cell-derived motor neurons.

Authors:  Lorenzo Errichelli; Stefano Dini Modigliani; Pietro Laneve; Alessio Colantoni; Ivano Legnini; Davide Capauto; Alessandro Rosa; Riccardo De Santis; Rebecca Scarfò; Giovanna Peruzzi; Lei Lu; Elisa Caffarelli; Neil A Shneider; Mariangela Morlando; Irene Bozzoni
Journal:  Nat Commun       Date:  2017-03-30       Impact factor: 14.919

10.  Expanded identification and characterization of mammalian circular RNAs.

Authors:  Junjie U Guo; Vikram Agarwal; Huili Guo; David P Bartel
Journal:  Genome Biol       Date:  2014-07-29       Impact factor: 13.583

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  13 in total

Review 1.  Circular RNAs in cardiovascular diseases.

Authors:  Xiaohan Mei; Shi-You Chen
Journal:  Pharmacol Ther       Date:  2021-09-27       Impact factor: 12.310

Review 2.  Non-Coding RNA Networks as Potential Novel Biomarker and Therapeutic Target for Sepsis and Sepsis-Related Multi-Organ Failure.

Authors:  Domenico Di Raimondo; Edoardo Pirera; Giuliana Rizzo; Irene Simonetta; Gaia Musiari; Antonino Tuttolomondo
Journal:  Diagnostics (Basel)       Date:  2022-05-31

3.  The Regulation Network and Clinical Significance of Circular RNAs in Breast Cancer.

Authors:  Juan Xu; Xiyi Chen; Yu Sun; Yaqian Shi; Fang Teng; Mingming Lv; Chen Liu; Xuemei Jia
Journal:  Front Oncol       Date:  2021-07-09       Impact factor: 6.244

Review 4.  New progresses of circular RNA biology: from nuclear export to degradation.

Authors:  Min Zhou; Mei-Sheng Xiao; Zhengguo Li; Chuan Huang
Journal:  RNA Biol       Date:  2020-12-09       Impact factor: 4.652

5.  Gawky modulates MTF-1-mediated transcription activation and metal discrimination.

Authors:  Ruirui Jia; Zhenxing Song; Jiamei Lin; Zhengguo Li; Ge Shan; Chuan Huang
Journal:  Nucleic Acids Res       Date:  2021-06-21       Impact factor: 16.971

6.  Defining an evolutionarily conserved role of GW182 in circular RNA degradation.

Authors:  Ruirui Jia; Mei-Sheng Xiao; Zhengguo Li; Ge Shan; Chuan Huang
Journal:  Cell Discov       Date:  2019-09-17       Impact factor: 10.849

Review 7.  Comprehensive landscape and future perspectives of circular RNAs in colorectal cancer.

Authors:  Fei Long; Zhi Lin; Liang Li; Min Ma; Zhixing Lu; Liang Jing; Xiaorong Li; Changwei Lin
Journal:  Mol Cancer       Date:  2021-02-03       Impact factor: 27.401

Review 8.  The functional roles, cross-talk and clinical implications of m6A modification and circRNA in hepatocellular carcinoma.

Authors:  Sha Qin; Yitao Mao; Xue Chen; Juxiong Xiao; Yan Qin; Luqing Zhao
Journal:  Int J Biol Sci       Date:  2021-07-22       Impact factor: 6.580

9.  Antisense oligonucleotide technology can be used to investigate a circular but not linear RNA-mediated function for its encoded gene locus.

Authors:  Zhenxing Song; Ruirui Jia; Mingfeng Tang; Fei Xia; Haiyang Xu; Zhengguo Li; Chuan Huang
Journal:  Sci China Life Sci       Date:  2020-08-17       Impact factor: 6.038

Review 10.  Circular RNAs Are Regulators of Diverse Animal Transcriptomes: One Health Perspective.

Authors:  Dora Zucko; Kathleen Boris-Lawrie
Journal:  Front Genet       Date:  2020-09-18       Impact factor: 4.599

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