| Literature DB >> 30524470 |
Domenico Roberti1, Renata Conforti2, Teresa Giugliano2, Barbara Brogna2, Immacolata Tartaglione1, Maddalena Casale1, Giulio Piluso2, Silverio Perrotta1.
Abstract
Diamond-Blackfan anemia (DBA) is a rare congenital erythroid aplasia with a highly heterogeneous genetic background; it usually occurs in infancy. Approximately 30-40% of patients have other associated congenital anomalies; in particular, facial anomalies, such as cleft palate, are part of about 10% of the DBA clinical presentations. Pierre Robin sequence (PRS) is a heterogeneous condition, defined by the presence of the triad of glossoptosis, micrognathia and cleft palate; it occurs in 1/8500 to 1/14,000 births. Klippel Feil (KF) syndrome is a complex of both osseous and visceral anomalies, characterized mainly by congenital development defects of the cervical spine. We describe the case of a 22-years-old woman affected by DBA, carrying a de novo deletion about 500 Kb-long at 12q13.2-q13.3 that included RPS26 and, at least, others 25 flanking genes. The patient showed craniofacial anomalies due to PRS and suffered for KF deformities (type II). Computed Tomography study of cranio-cervical junction (CCJ) drew out severe bone malformations and congenital anomalies as atlanto-occipital assimilation (AOA), arcuate foramen and occipito-condylar hyperplasia. Foramen magnum was severely reduced. Atlanto-axial instability (AAI) was linked to atlanto-occipital assimilation, congenital vertebral fusion and occipito-condyle bone hyperplasia. Basilar invagination and platybasia were ruled out on CT and Magnetic Resonance Imaging (MRI) studies. Furthermore, the temporal Bone CT study showed anomalies of external auditory canals, absent mastoid pneumatization, chronic middle ear otitis and abnormal course of the facial nerve bones canal. The described phenotype might be related to the peculiar deletion affecting the patient, highlighting that genes involved in the in the breakdown of extracellular matrix (MMP19), in cell cycle regulation (CDK2), vesicular trafficking (RAB5B), in ribonucleoprotein complexes formation (ZC3H10) and muscles function (MYL6 and MYL6B) could be potentially related to bone-developmental disorders. Moreover, it points out that multiple associated ribosomal deficits might play a role in DBA-related phenotypes, considering the simultaneous deletion of three of them in the index case (RPS26, PA2G4 and RPL41), and it confirms the association among SLC39A5 functional disruption and severe myopia. This report highlights the need for a careful genetic evaluation and a detailed phenotype-genotype correlation in each complex malformative syndrome.Entities:
Keywords: Diamond Blackfan anemia; Klippel feil syndrome; Pierre Robin sequence; craniocervical junction; craniofacial syndromes; craniometry; musculoskeletal system development
Year: 2018 PMID: 30524470 PMCID: PMC6262175 DOI: 10.3389/fgene.2018.00549
Source DB: PubMed Journal: Front Genet ISSN: 1664-8021 Impact factor: 4.599
Figure 1(A) CT minimum intensity projection (MIP) Sagittal (a: right parasagittal plane, b: midsagittal plane, c: left parasagittal plane) and Coronal (d: anterior atlanto-occipital complete fusion, e: lateral masses atlanto-occipital bilateral complete fusion, f: posterior atlanto-occipital partial fusion) CCJ reconstruction. Complete C 1 anterior arch and lateral masses fusion and partial fusion of the posterior arch to the occipital foramen (double-headed arrows). Foramen arcuate (white harrows). Note the “comma” appearance of complete anterior atlanto-occipital fusion (curved harrow) and the smaller odontoid process (arrowhead). (B) CT Coronal (a) and transverse minimum intensity projection (MIP) (b–e) and transverse shaded surface display (SSD) (f) reconstructions of narrowed foramen magnum due to right occipito-condylar hyperplasia (withe arrows). (C) MR transverse T2 (a), T1 (b), FLAIR (c) and coronal FLAIR (d) weighed sequences, show right ventrolateral compression of the lower medulla and upper cervical spinal cord (white arrow) at the level of narrowed foramen magnum due to CCJ complex malformation (black star).
Figure 2(A) Transverse (a–c) and Coronal (d) minimum intensity projection (MIP) CT temporal bone study. Right external auditory canal malformation (a) (white arrow); right chronic otitis media (b) (white star); ankyloses of left ossicular chain (c) (white circle); right widening of facial canal (third segment) (dotted arrow) and partial calcification of left tympanic membrane (arrowhead) (d). (B) MR Coronal T2 (a–c, e), Sagittal T1 (d), and Sagittal T2 (f) weighed sequences whole spine study. The study shows, besides rotoscoliosis (a, b), cervical (C 2–C 3, C 4–C 5) (d, f) and lumbar (L 4–L 5) vertebral fusion (white arrows), and L 5 bilateral sacralisation (e) (white stars) (KFS type II malformation).
Figure 3In the gene view (top), the probe distribution and signal intensity are shown for the index patient (green) and her parents (red and blue), with a green bar indicating the deletion detected with 8 probes. In the UCSC graphic view (middle), a similarly colored bar corresponds to the minimal aberration length, while the flanking grey bars indicate the 5' and 3' breakpoint boundaries. The results of genomic quantification by real-time PCR are schematically represented (bottom). The middle base-pair position of each amplicon along chromosome is surmounted by a square corresponding to the number of detected copies.
List of genes deleted in the described patient, with results of Taqman assay and already associated inherited diseases.
| SAP domain containing ribonucleoprotein | 0,99 | NT | 610049 | ||||
| DnaJ (Hsp40) homolog, subfamily C, member 14 | 1,00 | NT | 606092 | ||||
| ORM1-like 2 (S. cerevisiae) | 0,15 | NT | 610074 | ||||
| Matrix metallopeptidase 19 | 0,00 | ↓ | Cavitary optic disc anomalies | 611543 | AD | ||
| PYM homolog 1, exon junction complex associated factor | 0.86 | ↓ | |||||
| Diacylglycerol kinase, alpha 80kDa | 1,00 | ↓ | 125855 | ||||
| Premelanosome protein | 0,00 | ↓ | 155550 | ||||
| Cyclin-dependent kinase 2 | 0,96 | ↓ | 116953 | ||||
| RAB5B, member RAS oncogene family | 0,22 | ↓ | 179514 | ||||
| Sulfite oxidase, nuclear gene encoding mitochondrial protein | 0,00 | ↓ | Sulfite oxidase deficiency | 272300 | AR | ||
| IKAROS family zinc finger 4 (Eos) | 0,95 | ↓ | 606239 | ||||
| Ribosomal protein S26 | 0,75 | ↓ | Diamond-Blackfan anemia 10 | 613309 | AD | ||
| V-erb-b2 erythroblastic leukemia viral oncogene homolog 3 (avian) | 0,00 | ↓ | Lethal congenital contractural syndrome 2 | 607598 | AR | ||
| Proliferation-associated 2G4, 38kDa | 1,00 | ↓ | 602145 | ||||
| Ribosomal protein L41 | 0,04 | ↓ | 613315 | ||||
| Zinc finger CCCH-type containing 10 | 0,79 | ↓ | |||||
| Extended synaptotagmin-like protein 1 | 0,00 | ↓ | 616670 | ||||
| Myosin, light chain 6B, alkali, smooth muscle and non-muscle | 0,00 | ↓ | 609930 | ||||
| Myosin, light chain 6, alkali, smooth muscle and non-muscle | 0,26 | ↓ | 609931 | ||||
| SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 | 1,00 | ↓ | 601734 | ||||
| Ring finger protein 41 | 0,86 | ↓ | |||||
| Nucleic acid binding protein 2 | 0,96 | ↓ | 612104 | ||||
| Solute carrier family 39 (metal ion transporter), member 5 | 0,00 | ↓ | Myopia 24, autosomal dominant | 615946 | AD | ||
| Ankyrin repeat domain 52 | 1,00 | NT | |||||
| Coenzyme Q10 homolog A (S. cerevisiae), nuclear gene encoding mitochondrial protein | 0,12 | NT | |||||
| Citrate synthase, nuclear gene encoding mitochondrial protein | 1,00 | NT | 118950 |
Genes are listed as by their locus on chromosome 12; genes already linked to diseases are reported with their associated diseases and inheritance. Taqman assays were used to test the expression levels of the core of this deletion. For each gene, pLI annotated in Exac Browser (.