Literature DB >> 30521328

Radical Approach to Enzymatic β-Thioether Bond Formation.

Alessio Caruso1, Leah B Bushin1, Kenzie A Clark1, Ryan J Martinie1, Mohammad R Seyedsayamdost1,2.   

Abstract

Ribosomally synthesized and post-translationally modified peptides (RiPPs) are an emerging class of natural products that harbor diverse chemical functionalities, usually introduced via the action of a small number of tailoring enzymes. We have been interested in RiPP biosynthetic gene clusters that encode unusual metalloenzymes, as these may install as yet unknown alterations. Using a new bioinformatic search strategy, we recently identified an array of unexplored RiPP gene clusters that are quorum sensing-regulated and contain one or more uncharacterized radical S-adenosylmethionine (RaS) metalloenzymes. Herein, we investigate the reaction of one of these RaS enzymes and find that it installs an intramolecular β-thioether bond onto its substrate peptide by connecting a Cys-thiol group to the β-carbon of an upstream Asn residue. The enzyme responsible, NxxcB, accepts several amino acids in place of Asn and introduces unnatural β-thioether linkages at unactivated positions. This new transformation adds to the growing list of Nature's peptide macrocyclization strategies and expands the already impressive catalytic repertoire of the RaS enzyme superfamily.

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Year:  2018        PMID: 30521328     DOI: 10.1021/jacs.8b11060

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  23 in total

1.  Electron Paramagnetic Resonance Spectroscopic Identification of the Fe-S Clusters in the SPASM Domain-Containing Radical SAM Enzyme PqqE.

Authors:  Lizhi Tao; Wen Zhu; Judith P Klinman; R David Britt
Journal:  Biochemistry       Date:  2019-12-11       Impact factor: 3.162

Review 2.  Occurrence, function, and biosynthesis of mycofactocin.

Authors:  Richard Ayikpoe; Vishnu Govindarajan; John A Latham
Journal:  Appl Microbiol Biotechnol       Date:  2019-02-18       Impact factor: 4.813

3.  Reconstitution and Substrate Specificity of the Thioether-Forming Radical S-Adenosylmethionine Enzyme in Freyrasin Biosynthesis.

Authors:  Timothy W Precord; Nilkamal Mahanta; Douglas A Mitchell
Journal:  ACS Chem Biol       Date:  2019-09-09       Impact factor: 5.100

4.  Structural Properties and Catalytic Implications of the SPASM Domain Iron-Sulfur Clusters in Methylorubrum extorquens PqqE.

Authors:  Wen Zhu; Lindsey M Walker; Lizhi Tao; Anthony T Iavarone; Xuetong Wei; R David Britt; Sean J Elliott; Judith P Klinman
Journal:  J Am Chem Soc       Date:  2020-07-09       Impact factor: 15.419

Review 5.  The manifold roles of microbial ribosomal peptide-based natural products in physiology and ecology.

Authors:  Yanyan Li; Sylvie Rebuffat
Journal:  J Biol Chem       Date:  2019-11-29       Impact factor: 5.157

6.  New Role for Radical SAM Enzymes in the Biosynthesis of Thio(seleno)oxazole RiPP Natural Products.

Authors:  Julia K Lewis; Andrew S Jochimsen; Sarah J Lefave; Anthony P Young; William M Kincannon; Andrew G Roberts; Matthew T Kieber-Emmons; Vahe Bandarian
Journal:  Biochemistry       Date:  2021-11-03       Impact factor: 3.162

7.  Bicyclostreptins are radical SAM enzyme-modified peptides with unique cyclization motifs.

Authors:  Leah B Bushin; Brett C Covington; Kenzie A Clark; Alessio Caruso; Mohammad R Seyedsayamdost
Journal:  Nat Chem Biol       Date:  2022-08-11       Impact factor: 16.174

8.  Bioinformatic Mapping of Radical S-Adenosylmethionine-Dependent Ribosomally Synthesized and Post-Translationally Modified Peptides Identifies New Cα, Cβ, and Cγ-Linked Thioether-Containing Peptides.

Authors:  Graham A Hudson; Brandon J Burkhart; Adam J DiCaprio; Christopher J Schwalen; Bryce Kille; Taras V Pogorelov; Douglas A Mitchell
Journal:  J Am Chem Soc       Date:  2019-05-13       Impact factor: 15.419

9.  The hidden enzymology of bacterial natural product biosynthesis.

Authors:  Thomas A Scott; Jörn Piel
Journal:  Nat Rev Chem       Date:  2019-06-12       Impact factor: 34.035

10.  Trapping a cross-linked lysine-tryptophan radical in the catalytic cycle of the radical SAM enzyme SuiB.

Authors:  Aidin R Balo; Alessio Caruso; Lizhi Tao; Dean J Tantillo; Mohammad R Seyedsayamdost; R David Britt
Journal:  Proc Natl Acad Sci U S A       Date:  2021-05-25       Impact factor: 11.205

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