| Literature DB >> 30519634 |
Aneta Cymbaluk-Płoska1, Anita Chudecka-Głaz2, Agnieszka Sompolska-Rzechuła3, Kamila Rasinska2, Paulina Dubiel2, Janusz Menkiszak2.
Abstract
Ovarian cancer is characterised by the greatest mortality among all tumors of the reproductive tract. This study included 246 patients which consisted of 136 women with ovarian cancer without genetic mutation and 110 women with benign ovarian cysts. We created two mathematical logic models containing positive and negative risk factors of ovarian cancer such as: age at last menstruation cycle, patient age, OC, HRT, smoking, education status, and alcohol consumption. The calculated cut-off point for the first model was 0.5117. Classification determined on the basis of that cut-off point yielded 87.19% of correctly classified cases, of which 91.38% are "case" and 81.61% - "noncase". For the second model the designated cut-off point was set at 0.5149 and the percentage of correctly classified patients was 88.12%, with 92.24% correctly rated as cancer patients and 82.56% of the cases rightly recognised as having no ovarian cancer. Logit is a simple mathematical model that can be a useful tool for identification of patients with increased risk of ovarian cancer.Entities:
Keywords: Logit; Mathematical model; Ovarian cancer; Risk factor
Year: 2018 PMID: 30519634 PMCID: PMC6272051 DOI: 10.1515/med-2018-0084
Source DB: PubMed Journal: Open Med (Wars)
The matrix of case classifications.
| Observed values | |||
|---|---|---|---|
| Expected values | Total | ||
| yi = 1 | yi = 0 | ||
| ýi = 1 | n11 | n12 | n1· |
| ýi = 0 | n21 | n22 | n2· |
| Total | n·1 | n·2 | n |
Age distribution of first and the last menstruation in the whole study group.
| Coefficient of | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Mean | Median | Minimum | Maximum | Lower quartile | Upper quartile | SD | |||
| N valid | variation | ||||||||
| (FM) first menstruation | 222 | 13.698 | 13.000 | 7.000 | 20.000 | 13.000 | 15.000 | 1.771 | 12.925 |
| (LM) last menstruation | 227 | 47.229 | 47.000 | 18.000 | 82.000 | 40.000 | 50.000 | 9.016 | 20.385 |
| age | 234 | 55.432 | 54.000 | 18.000 | 86.000 | 41.000 | 65.000 | 15.765 | 30.068 |
Age analysis in individual groups
| Odds ratio | 95% | ||
|---|---|---|---|
| Age in years | p | ||
| OR | confidence interval | ||
| < 56 > | 6.42 | 2.3 – 14.1 | 0.000001 |
Percentage distribution of the various risk factors in ovarian cancer and control group.
| Study group | Yes | No |
|---|---|---|
| Ovarian Cancer | 53% | 47% |
| Menopause | 57% | 43% |
| Nulliparous | 24% | 76% |
| Multiparous | 57% | 43% |
| Used OC | 23% | 77% |
| Used HRT | 26% | 74% |
| Higher education | 30% | 70% |
| Smoking | 40% | 60% |
| Alcohol | 16% | 84% |
The risk of ovarian cancer including the first and last menstruation.
| First menstruation | Odds ratio OR | 95% confidence interval | p |
|---|---|---|---|
| < 13 > | 1.756 | 0.7 – 4.3 | 0.079 |
| Last menstruation | |||
| <48 > | 6.82 | 3.1 – 16.2 | 0.00001 |
| Menopause | 7.09 | 4.4 – 17.3 | 0.00001 |
The risk of developing ovarian cancer, taking into account the parity of patients.
| Parity | OR | 95% confidence interval | p |
|---|---|---|---|
| Nulliparous | 1.27 | 0.1 – 3.4 | 0.000087 |
| Uniparous | 1.4 | 0.6 – 8.2 | 0.29 |
| Multiparous | 2.17 | 0.9 – 7.9 | 0.0038 |
The risk of ovarian cancer in patients taking OC and RT.
| Use | OR | 95% confidence interval | p |
|---|---|---|---|
| OC | 9.47 | 4.7 – 19.5 | 0.00032 |
| HRT | 6.93 | 2.8 – 16.2 | 0.011 |
Chance of getting ovarian cancer depending on the usage of drugs.
| Substance use | OR | 95% confidence interval | p |
|---|---|---|---|
| Smoking | 3.77 | 1.9 – 10.8 | 0.00004 |
| Alcohol consumption | 2.33 | 1.2 – 6.9 | 0.028 |
Chance of getting ovarian cancer depending on other factors.
| Other risk factors | OR | 95% confidence interval | p |
|---|---|---|---|
| Higher education | 9.7 | 5.4 – 18.2 | 0.000002 |
| Family history of cancer | 14.8 | 8.2 – 21.6 | 0.000001 |
Evaluation of parameters of the logit model.
| Parameter | ||||
|---|---|---|---|---|
| Variable | Variable | estimate | p value | Quotient |
| Constant | -9.4880 | 0.0000 | ||
| X2 | Age at last menstruation cycle (years) | 0.1374 | 0.0019 | 1.1472 |
| X3 | Patient age | 0.0621 | 0.0033 | 1.0641 |
| X6 | HRT | 4.0709 | 0.0001 | 58.6122 |
| X8 | Higher education | -2.6223 | 0.0000 | 0.0726 |
| X9 | Smoking | 1.7400 | 0.0004 | 5.6975 |
Accuracy of classification according to the logit model.
| Classification on the basis of the logit model | Observed classification | General accuracy of classification | |
|---|---|---|---|
| yi=1 | yi=0 | ||
| ýi=1 | 106 | 16 | 87.19% |
| ýi=0 | 10 | 71 | |
| Sensitivity | 91.38% | 84.4% | |
| Specificity | 90.6% | 81.61% | |
Evaluation of the parameters of the logit model.
| Variable | Variable | Parameter estimate | p value | Quotient |
|---|---|---|---|---|
| Constant | -9.8588 | 0.0000 | ||
| X2 | Age (years) at last menstruation | 0.1372 | 0.0019 | 1.1471 |
| X3 | Patient age | 0.0661 | 0.0020 | 1.0683 |
| X8 | HRT | 4.1447 | 0.0001 | 13.1009 |
| X10 | Higher education | -2.7135 | 0.0000 | 0.0663 |
| X11 | Smoking | 1.6559 | 0.0009 | 5.2377 |
| X12 | Alcohol consumption | 1.4831 | 0.0413 | 4.4066 |
Accuracy of classification of the logit model.
| Classification on the basis of the logit model | Observed classification | General accuracy of classification | |
|---|---|---|---|
| yi=1 | yi=0 | ||
| ýi=1 | 107 | 15 | 88.12% |
| ýi=0 | 9 | 71 | |
| Sensitivity | 92.24% | 79.9% | |
| Specificity | 91.6% | 82.56% | |
Figure 1ROC curve for models 1 and 2.
Risk factors for patients with ovarian cancer.
| Risk factor | ||||
|---|---|---|---|---|
| Occurs | ||||
| Does not occur | Total | |||
| Occur | a | b | a+b | |
| Examined phenomenon | Does not occur | c | d | c+d |
| Total | a+c | b+d | a+b+c+d |
Goodness of fit of the logistic models to the empirical data.
| Coefficient of classification | accuracy | Hosmer–Lemenshow test | |||||
|---|---|---|---|---|---|---|---|
| Model | Area under ROC curve | ||||||
| Model 1 | 87.19% | 52.94% | 69.11% | 51.48% | 5.64 | 0.6878 | 92.72% |
| Model 2 | 88.12% | 54.38% | 70.36% | 52.38% | 7.16 | 0.5192 | 93.39% |