Literature DB >> 30518301

CYP2C9*61, a rare missense variant identified in a Puerto Rican patient with low warfarin dose requirements.

Karla I Claudio-Campos1, Pablo González-Santiago2, Jessica Y Renta3, Jovaniel Rodríguez4, Kelvin Carrasquillo5, Andrea Gaedigk6, Abiel Roche5, Jorge Ducongé7.   

Abstract

Warfarin continues to be the mainstay therapy for preventing thrombus formation. Although pharmacogenetic algorithms have shown higher predictability of the optimal warfarin dose and lower occurrence of bleeding episodes, they often do not include ethno-specific genetic variants relevant to non-Europeans. This case report describes a rare missense variant at exon 9 of CYP2C9 (rs202201137; c.1370A>G transition; p.Asn457Ser) found in a Puerto Rican patient with low warfarin dose requirements (3 mg/day). The haplotype characterized by two amino acid changes, Asn457Ser and Arg144Cys (rs1799853; c.430C>T), has been designated CYP2C9*61 by the Pharmacogene Variation Consortium. According to prediction scores assessed with the Combined Annotation Dependent Depletion tool, CYP2C9*61 (p.Asn457Ser) was classified as nondeleterious, therefore its impact on CYP2C9 enzymatic activity cannot be postulated.

Entities:  

Keywords:  ; Hispanics; anticoagulation; haplotype; next-generation sequencing; pharmacogenetics (PGx); warfarin

Mesh:

Substances:

Year:  2018        PMID: 30518301      PMCID: PMC6479273          DOI: 10.2217/pgs-2018-0143

Source DB:  PubMed          Journal:  Pharmacogenomics        ISSN: 1462-2416            Impact factor:   2.533


  21 in total

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2.  Integration of genetic, clinical, and INR data to refine warfarin dosing.

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Journal:  Clin Pharmacol Ther       Date:  2010-04-07       Impact factor: 6.875

Review 3.  The neutral theory of molecular evolution and the world view of the neutralists.

Authors:  M Kimura
Journal:  Genome       Date:  1989       Impact factor: 2.166

4.  Genetic factors (VKORC1, CYP2C9, EPHX1, and CYP4F2) are predictor variables for warfarin response in very elderly, frail inpatients.

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Journal:  Clin Pharmacol Ther       Date:  2009-09-30       Impact factor: 6.875

5.  Rapid and accurate haplotype phasing and missing-data inference for whole-genome association studies by use of localized haplotype clustering.

Authors:  Sharon R Browning; Brian L Browning
Journal:  Am J Hum Genet       Date:  2007-09-21       Impact factor: 11.025

6.  National surveillance of emergency department visits for outpatient adverse drug events.

Authors:  Daniel S Budnitz; Daniel A Pollock; Kelly N Weidenbach; Aaron B Mendelsohn; Thomas J Schroeder; Joseph L Annest
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7.  CYP2C9*8 is prevalent among African-Americans: implications for pharmacogenetic dosing.

Authors:  Stuart A Scott; Malgorzata Jaremko; Steven A Lubitz; Ruth Kornreich; Jonathan L Halperin; Robert J Desnick
Journal:  Pharmacogenomics       Date:  2009-08       Impact factor: 2.533

8.  Major bleeding in patients with atrial fibrillation receiving apixaban or warfarin: The ARISTOTLE Trial (Apixaban for Reduction in Stroke and Other Thromboembolic Events in Atrial Fibrillation): Predictors, Characteristics, and Clinical Outcomes.

Authors:  Elaine M Hylek; Claes Held; John H Alexander; Renato D Lopes; Raffaele De Caterina; Daniel M Wojdyla; Kurt Huber; Petr Jansky; Philippe Gabriel Steg; Michael Hanna; Laine Thomas; Lars Wallentin; Christopher B Granger
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9.  Development of a pharmacogenetic-guided warfarin dosing algorithm for Puerto Rican patients.

Authors:  Alga S Ramos; Richard L Seip; Giselle Rivera-Miranda; Marcos E Felici-Giovanini; Rafael Garcia-Berdecia; Yirelia Alejandro-Cowan; Mohan Kocherla; Iadelisse Cruz; Juan F Feliu; Carmen L Cadilla; Jessica Y Renta; Krystyna Gorowski; Cunegundo Vergara; Gualberto Ruaño; Jorge Duconge
Journal:  Pharmacogenomics       Date:  2012-12       Impact factor: 2.533

10.  The Pharmacogene Variation (PharmVar) Consortium: Incorporation of the Human Cytochrome P450 (CYP) Allele Nomenclature Database.

Authors:  Andrea Gaedigk; Magnus Ingelman-Sundberg; Neil A Miller; J Steven Leeder; Michelle Whirl-Carrillo; Teri E Klein
Journal:  Clin Pharmacol Ther       Date:  2017-11-14       Impact factor: 6.875

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  1 in total

1.  Low-frequency variants at the CYP2C9 locus among Puerto Rican patients on warfarin: in silico predictions of functionality and conservation.

Authors:  Karla Claudio-Campos; Mariangeli Moneró-Paredes; Eliud Hernández; Jessicca Renta; Jorge Duconge
Journal:  Pharmacogenomics       Date:  2019-08       Impact factor: 2.533

  1 in total

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