Literature DB >> 30511670

X-ray crystallographic analysis of the catalytic domain of α-1,3-glucanase FH1 from Paenibacillus glycanilyticus overexpressed in Brevibacillus choshinensis.

Rattanaporn Intuy1, Takafumi Itoh2, Wasana Suyotha3, Junji Hayashi1, Shigekazu Yano4, Koki Makabe4, Mamoru Wakayama1, Takao Hibi2.   

Abstract

α-1,3-Glucanase hydrolyzes α-1,3-glucan, an insoluble linear α-1,3-linked homopolymer of glucose that is found in the extracellular polysaccharides produced by oral streptococci in dental plaque and in fungal cell walls. This enzyme could be of application in dental care and the development of fungal cell-wall lytic enzymes, but its three-dimensional structure has not been available to date. In this study, the recombinant catalytic domain of α-1,3-glucanase FH1 from Paenibacillus glycanilyticus FH11, which is classified into glycoside hydrolase family 87, was prepared using a Brevibacillus choshinensis expression system and purified in a soluble form. Crystals of the purified protein were produced by the sitting-drop vapor-diffusion method. Diffraction data were collected to a resolution of 1.6 Å using synchrotron radiation. The crystals obtained belonged to the tetragonal space group P41212 or P43212, with unit-cell parameters a = b = 132.6, c = 76.1 Å. The space group and unit-cell parameters suggest that there is one molecule in the asymmetric unit.

Entities:  

Keywords:  Paenibacillus glycanilyticus; catalytic domains; α-1,3-glucan; α-1,3-glucanase

Mesh:

Substances:

Year:  2018        PMID: 30511670      PMCID: PMC6277962          DOI: 10.1107/S2053230X18013109

Source DB:  PubMed          Journal:  Acta Crystallogr F Struct Biol Commun        ISSN: 2053-230X            Impact factor:   1.056


  15 in total

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Journal:  Biochimie       Date:  2007-09-29       Impact factor: 4.079

2.  Biochemical and molecular characterization of a novel type of Mutanase from Paenibacillus sp. strain RM1: identification of its mutan-binding domain, essential for degradation of Streptococcus mutans biofilms.

Authors:  Isao Shimotsuura; Hiromitsu Kigawa; Motoyasu Ohdera; Howard K Kuramitsu; Syozi Nakashima
Journal:  Appl Environ Microbiol       Date:  2008-03-07       Impact factor: 4.792

3.  Processing of X-ray diffraction data collected in oscillation mode.

Authors:  Z Otwinowski; W Minor
Journal:  Methods Enzymol       Date:  1997       Impact factor: 1.600

4.  Domain structure and function of α-1,3-glucanase from Bacillus circulans KA-304, an enzyme essential for degrading basidiomycete cell walls.

Authors:  Wasana Suyotha; Shigekazu Yano; Kazuyoshi Takagi; Nopakarn Rattanakit-Chandet; Takashi Tachiki; Mamoru Wakayama
Journal:  Biosci Biotechnol Biochem       Date:  2013-03-07       Impact factor: 2.043

5.  Characterization of α-1,3-glucanase isozyme from Paenibacillus glycanilyticus FH11 in a new subgroup of family 87 α-1,3-glucanase.

Authors:  Wasana Suyotha; Shigekazu Yano; Takafumi Itoh; Hiroko Fujimoto; Takao Hibi; Takashi Tachiki; Mamoru Wakayama
Journal:  J Biosci Bioeng       Date:  2014-04-20       Impact factor: 2.894

6.  Brevibacillus expression system: host-vector system for efficient production of secretory proteins.

Authors:  Makoto Mizukami; Hiroshi Hanagata; Akira Miyauchi
Journal:  Curr Pharm Biotechnol       Date:  2010-04       Impact factor: 2.837

7.  Identification and characterization of the Trichoderma harzianum gene encoding alpha-1,3-glucanase involved in streptococcal mutan degradation.

Authors:  Adrian Wiater; Monika Janczarek; Małgorzata Pleszczyńska; Janusz Szczodrak
Journal:  Pol J Microbiol       Date:  2011

8.  Aspergillus nidulans alpha-1,3 glucanase (mutanase), mutA, is expressed during sexual development and mobilizes mutan.

Authors:  H Wei; M Scherer; A Singh; R Liese; R Fischer
Journal:  Fungal Genet Biol       Date:  2001-12       Impact factor: 3.495

9.  The Pfam protein families database: towards a more sustainable future.

Authors:  Robert D Finn; Penelope Coggill; Ruth Y Eberhardt; Sean R Eddy; Jaina Mistry; Alex L Mitchell; Simon C Potter; Marco Punta; Matloob Qureshi; Amaia Sangrador-Vegas; Gustavo A Salazar; John Tate; Alex Bateman
Journal:  Nucleic Acids Res       Date:  2015-12-15       Impact factor: 16.971

10.  In vitro synthesis of linear α-1,3-glucan and chemical modification to ester derivatives exhibiting outstanding thermal properties.

Authors:  Sakarin Puanglek; Satoshi Kimura; Yukiko Enomoto-Rogers; Taizo Kabe; Makoto Yoshida; Masahisa Wada; Tadahisa Iwata
Journal:  Sci Rep       Date:  2016-07-29       Impact factor: 4.379

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  1 in total

1.  Crystal structure of the catalytic unit of GH 87-type α-1,3-glucanase Agl-KA from Bacillus circulans.

Authors:  Shigekazu Yano; Wasana Suyotha; Natsuki Oguro; Takashi Matsui; Shota Shiga; Takafumi Itoh; Takao Hibi; Yoshikazu Tanaka; Mamoru Wakayama; Koki Makabe
Journal:  Sci Rep       Date:  2019-10-25       Impact factor: 4.379

  1 in total

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