| Literature DB >> 30487424 |
Xingxing Teng1, Yuanyuan Wang2, Jinhua Gu3, Peiqi Shi4, Zhibin Shen5, Lianbao Ye6,7.
Abstract
Pseudoaspidinol is aEntities:
Keywords: allylamine; antifungal activity; molecular docking; phloroglucinol derivatives; squalene epoxidase
Mesh:
Substances:
Year: 2018 PMID: 30487424 PMCID: PMC6321598 DOI: 10.3390/molecules23123116
Source DB: PubMed Journal: Molecules ISSN: 1420-3049 Impact factor: 4.411
Figure 1Design of compounds.
Scheme 1Synthesis of phloroglucinol derivatives. (a) POCl3, DMF, EtoAc. (b) NaBH3CN, THF, PH 4. (c) AlCl3, CS2, reflux. (d) AlCl3, CH2Cl2, rt. (e) CH3I, K2CO3, DMF, reflux. (f) PEG-400, K2CO3, KI, EtOH, reflux.
Antifungal activities of compounds on Trichophyton rubrum (Tr) and Trichophyton mentagrophytes (Tm).
| Compound | ||
|---|---|---|
|
| 41.38 μg/mL | 33.63 μg/mL |
|
| 19.57 μg/mL | 39.82 μg/mL |
|
| 160 μg/mL | 160 μg/mL |
|
| 160 μg/mL | 160 μg/mL |
|
| 160 μg/mL | 160 μg/mL |
|
| 62.5 μg/mL | 62.5 μg/mL |
|
| 39.89 μg/mL | 39.72 μg/mL |
|
| 160 μg/mL | 160 μg/mL |
|
| 78.14 μg/mL | 79.53 μg/mL |
|
| 160 μg/mL | 160 μg/mL |
|
| 36.42 μg/mL | 37.46 μg/mL |
|
| 37.23 μg/mL | 39.54 μg/mL |
|
| 39.24 μg/mL | 39.17 μg/mL |
|
| 160 μg/mL | 160 μg/mL |
|
| 5.12 μg/mL | 8.13 μg/mL |
|
| 160 μg/mL | 160 μg/mL |
|
| 3.05 μg/mL | 5.13 μg/mL |
| Pseudoaspidinol | 21.06 μg/mL | 19.89 μg/mL |
| Naftifine | 1.036 μg/mL | 1.072 μg/mL |
Figure 2(A) Complete antifungal effect. (B) Growth effect of fungal strains: Trichophyton rubrun. (C) Growth effect of fungal strains: Trichophyton mentagrophytes.
Figure 3Activities of all compounds against Trichophyton rubrun and Trichophyton mentagrophytes. (A) The antifungal results of all compounds against Trichophyton rubrun. (B) The antifungal results of all compounds against Trichophyton mentagrophytes. (C) The strong antifungal results of compounds against Trichophyton rubrun. (D) The strong antifungal results of compounds against Trichophyton mentagrophytes.
Docking results of synthesized compounds.
| Compounds | (−) Binding Energy ΔG (kcal/mol) 2AIB |
|---|---|
|
| 6.23 |
|
| 5.65 |
|
| 6.02 |
|
| 6.18 |
|
| 5.98 |
|
| 6.00 |
|
| 6.44 |
|
| 9.93 |
|
| 11.27 |
|
| 11.80 |
| Pseudoaspidinol | 5.75 |
| Naftifine | 9.32 |
Figure 4Binding modes of compounds 13–17 with 2AIB. The structural framework of compounds was marked with amaranth color. Protein skeleton of 2AIB was marked with green color. The atoms involved in the path are identified as colored stick. (Oxygen (orange), nitrogen (blue), hydrogen in hydroxyl (white)).
Figure 5(A) Optimal binding modes of compound 17 in squalene epoxidase (PDB ID 2AIB); (B) 2D interaction plot of 2AIB and compound 17. The structural framework of compound 17 was marked with green color. Protein skeleton of 2AIB was marked with red color. The atoms involved in the path are identified as colored stick. (Oxygen (red), nitrogen (blue), hydrogen (white)).
Figure 6Plots of RMSD for all of the backbone atoms (Å) vs. simulation time (ps) for 2AIB in complex with compound 17.