Literature DB >> 26063944

In Silico Analog Design for Terbinafine Against Trichophyton rubrum: A Preliminary Study.

Sudha Karumuri1, Puneet Kumar Singh2, Pratyoosh Shukla2.   

Abstract

The diseases caused by dermatophytes are common among several other infections which cause serious threat to human health. It is evident that enzyme squalene epoxidase is responsible for prolonged dermatophyte infection and it is appealing to note that this enzyme is also responsible for fatty acid synthesis in these groups of fungi. In the present study, terbinafine drug which targets enzyme squalene epoxidase has been explored to design its various novel analogues. The present study suggests that many more prominent drug analogues could be constituted which may be crucial towards designing new drug candidates. In the present study, we have designed a series of such analogues viz. [(2E)-6,6-dimethylhept-2-en-4-yn-1-yl](methyl)(naphthalen-1-ylmethyl)amine, N-[8-({[(2E)-6,6-dimethylhept-2-en-4-yn-1-yl](methyl)amino}methyl)naphthalen-1-yl]-2-(sulfoamino) acetamide, {[4-(dihydroxyamino)-8-({[(2E)-6,6-dimethylhept-2-en-4-yn-1-yl](methyl)amino}methyl)naphthalen-1-yl]sulfanyl}methanol and (R)-{[4-({[(2E,6R)-6,7-dimethyloct-2-en-4-yn-1-yl](methyl)amino}methyl)-5-[(hydroxysulfamoyl)amino]naphthalen-1-yl]amino}sulfinic acid. Moreover, further by molecular docking approach the binding between enzyme and designed analogues was further analysed. The present preliminary report suggested a considerably good docking interaction score of -338.75 kcal/mol between terbinafine and squalene epoxidase from Trichophyton rubrum. This preliminary study implies that few designed candidate ligands can be effectual towards the activity of this enzyme and can play crucial role in pathogenesis control of T. rubrum.

Entities:  

Keywords:  Dermatophytes; Molecular docking; Squalene epoxidase; Trichophyton rubrum

Year:  2015        PMID: 26063944      PMCID: PMC4456508          DOI: 10.1007/s12088-015-0524-x

Source DB:  PubMed          Journal:  Indian J Microbiol        ISSN: 0046-8991            Impact factor:   2.461


  27 in total

1.  Improving the physical realism and structural accuracy of protein models by a two-step atomic-level energy minimization.

Authors:  Dong Xu; Yang Zhang
Journal:  Biophys J       Date:  2011-11-15       Impact factor: 4.033

2.  Design, synthesis, and antifungal activity of novel conformationally restricted triazole derivatives.

Authors:  Wenya Wang; Chunquan Sheng; Xiaoying Che; Haitao Ji; Zhenyuan Miao; Jianzhong Yao; Wannian N Zhang
Journal:  Arch Pharm (Weinheim)       Date:  2009-12       Impact factor: 3.751

3.  The FAF-Drugs2 server: a multistep engine to prepare electronic chemical compound collections.

Authors:  David Lagorce; Julien Maupetit; Jonathan Baell; Olivier Sperandio; Pierre Tufféry; Maria A Miteva; Hervé Galons; Bruno O Villoutreix
Journal:  Bioinformatics       Date:  2011-06-02       Impact factor: 6.937

4.  Potential inhibitors of L-asparagine biosynthesis. 4. Substituted sulfonamide and sulfonylhydrazide analogues of L-asparagine.

Authors:  S Brynes; G J Burckart; M Mokotoff
Journal:  J Med Chem       Date:  1978-01       Impact factor: 7.446

Review 5.  Dermatophytes: host-pathogen interaction and antifungal resistance.

Authors:  Nalu Teixera de Aguiar Peres; Fernanda Cristina Albuquerque Maranhão; Antonio Rossi; Nilce Maria Martinez-Rossi
Journal:  An Bras Dermatol       Date:  2010 Sep-Oct       Impact factor: 1.896

6.  IFN-γ impairs Trichophyton rubrum proliferation in a murine model of dermatophytosis through the production of IL-1β and reactive oxygen species.

Authors:  Ludmila de Matos Baltazar; Patrícia Campi Santos; Talles Prosperi de Paula; Milene Alvarenga Rachid; Patrícia Silva Cisalpino; Danielle Glória Souza; Daniel Assis Santos
Journal:  Med Mycol       Date:  2014-02-13       Impact factor: 4.076

7.  Antifungal activity of the allylamine derivative terbinafine in vitro.

Authors:  G Petranyi; J G Meingassner; H Mieth
Journal:  Antimicrob Agents Chemother       Date:  1987-09       Impact factor: 5.191

8.  New azoles with potent antifungal activity: design, synthesis and molecular docking.

Authors:  Xiaoying Che; Chunquan Sheng; Wenya Wang; Yongbing Cao; Yulan Xu; Haitao Ji; Guoqiang Dong; Zhenyuan Miao; Jianzhong Yao; Wannian Zhang
Journal:  Eur J Med Chem       Date:  2009-05-24       Impact factor: 6.514

9.  I-TASSER server for protein 3D structure prediction.

Authors:  Yang Zhang
Journal:  BMC Bioinformatics       Date:  2008-01-23       Impact factor: 3.169

10.  Avogadro: an advanced semantic chemical editor, visualization, and analysis platform.

Authors:  Marcus D Hanwell; Donald E Curtis; David C Lonie; Tim Vandermeersch; Eva Zurek; Geoffrey R Hutchison
Journal:  J Cheminform       Date:  2012-08-13       Impact factor: 5.514

View more
  6 in total

1.  Functional analysis of the binding model of microbial inulinases using docking and molecular dynamics simulation.

Authors:  Puneet Kumar Singh; Josmi Joseph; Sukriti Goyal; Abhinav Grover; Pratyoosh Shukla
Journal:  J Mol Model       Date:  2016-03-08       Impact factor: 1.810

2.  Molecular Modeling of Cloned Bacillus subtilis Keratinase and Its Insinuation in Psoriasis Treatment Using Docking Studies.

Authors:  Sonali Gupta; Parul Tewatia; Jyoti Misri; Rajni Singh
Journal:  Indian J Microbiol       Date:  2017-09-26       Impact factor: 2.461

3.  Molecular Characterization and Computational Modelling of New Delhi Metallo-β-Lactamase-5 from an Escherichia coli Isolate (KOEC3) of Bovine Origin.

Authors:  D Purkait; A Ahuja; U Bhattacharjee; A Singha; K Rhetso; T K Dey; S Das; R K Sanjukta; K Puro; I Shakuntala; A Sen; A Banerjee; I Sharma; R S Bhatta; M Mawlong; C Guha; N R Pradhan; S Ghatak
Journal:  Indian J Microbiol       Date:  2016-02-11       Impact factor: 2.461

4.  An Alkaline Protease from Bacillus pumilus MP 27: Functional Analysis of Its Binding Model toward Its Applications As Detergent Additive.

Authors:  Mehak Baweja; Rameshwar Tiwari; Puneet K Singh; Lata Nain; Pratyoosh Shukla
Journal:  Front Microbiol       Date:  2016-08-03       Impact factor: 5.640

5.  Potential anti-alopecia constituents from Theobroma cacao: An in silico study.

Authors:  Dikdik Kurnia; Faruk Jayanto Kelutur; Resmi Mustarichie
Journal:  J Adv Pharm Technol Res       Date:  2021-04-27

Review 6.  Current Technological Improvements in Enzymes toward Their Biotechnological Applications.

Authors:  Mehak Baweja; Lata Nain; Yutaka Kawarabayasi; Pratyoosh Shukla
Journal:  Front Microbiol       Date:  2016-06-16       Impact factor: 5.640

  6 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.