Literature DB >> 30476196

Mobilization of Pack-CACTA transposons in Arabidopsis suggests the mechanism of gene shuffling.

Marco Catoni1,2, Thomas Jonesman1, Elisa Cerruti1, Jerzy Paszkowski1.   

Abstract

Pack-TYPE transposons are a unique class of potentially mobile non-autonomous elements that can capture, merge and relocate fragments of chromosomal DNA. It has been postulated that their activity accelerates the evolution of host genes. However, this important presumption is based only on the sequences of currently inactive Pack-TYPE transposons and the acquisition of chromosomal DNA has not been recorded in real time. Analysing the DNA copy number variation in hypomethylated Arabidopsis lines, we have now for the first time witnessed the mobilization of novel Pack-TYPE elements related to the CACTA transposon family, over several plant generations. Remarkably, these elements can insert into genes as closely spaced direct repeats and they frequently undergo incomplete excisions, resulting in the deletion of one of the end sequences. These properties suggest a mechanism of efficient acquisition of genic DNA residing between neighbouring Pack-TYPE transposons and its subsequent mobilization. Our work documents crucial steps in the formation of in vivo novel Pack-TYPE transposons, and thus the possible mechanism of gene shuffling mediated by this type of mobile element.
© The Author(s) 2018. Published by Oxford University Press on behalf of Nucleic Acids Research.

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Year:  2019        PMID: 30476196      PMCID: PMC6379663          DOI: 10.1093/nar/gky1196

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  41 in total

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10.  DNA sequence properties that predict susceptibility to epiallelic switching.

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