Literature DB >> 30460150

Data compression and improved registration for laser speckle contrast imaging of rodent brains.

Dene Ringuette1,2, Jacob Nauenberg3, Philippe P Monnier2, Peter L Carlen1,2, Ofer Levi1,3.   

Abstract

Single-frame blood flow maps from laser speckle contrast imaging (LSCI) contain high spatiotemporal variation that obscures high spatial-frequency vascular features, making precise image registration for signal amplification challenging. In this work, novel bivariate standardized moment filters (BSMFs) were used to provide stable measures of vessel edge location, permitting more robust LSCI registration. Relatedly, BSMFs enabled the stable reconstruction of vessel edges from sparsely distributed blood flow map outliers, which were found to retain most of the temporal dynamics. Consequently, data discarding and BSMF-based reconstruction enable efficient real-time quantitative LSCI data compression. Smaller LSCI-kernels produced log-normal blood flow distributions, enhancing sparse-to-dense inference.

Year:  2018        PMID: 30460150      PMCID: PMC6238931          DOI: 10.1364/BOE.9.005615

Source DB:  PubMed          Journal:  Biomed Opt Express        ISSN: 2156-7085            Impact factor:   3.732


  13 in total

1.  Noise in laser speckle correlation and imaging techniques.

Authors:  S E Skipetrov; J Peuser; R Cerbino; P Zakharov; B Weber; F Scheffold
Journal:  Opt Express       Date:  2010-07-05       Impact factor: 3.894

2.  A pyramid approach to subpixel registration based on intensity.

Authors:  P Thévenaz; U E Ruttimann; M Unser
Journal:  IEEE Trans Image Process       Date:  1998       Impact factor: 10.856

3.  Detrimental effects of speckle-pixel size matching in laser speckle contrast imaging.

Authors:  Sean J Kirkpatrick; Donald D Duncan; Elaine M Wells-Gray
Journal:  Opt Lett       Date:  2008-12-15       Impact factor: 3.776

4.  Intraoperative laser speckle contrast imaging with retrospective motion correction for quantitative assessment of cerebral blood flow.

Authors:  Lisa M Richards; Erica L Towle; Douglas J Fox; Andrew K Dunn
Journal:  Neurophotonics       Date:  2014-08-18       Impact factor: 3.593

5.  High resolution cerebral blood flow imaging by registered laser speckle contrast analysis.

Authors:  Peng Miao; Abhishek Rege; Nan Li; Nitish V Thakor; Shanbao Tong
Journal:  IEEE Trans Biomed Eng       Date:  2010-02-05       Impact factor: 4.538

6.  Reducing misfocus-related motion artefacts in laser speckle contrast imaging.

Authors:  Dene Ringuette; Iliya Sigal; Raanan Gad; Ofer Levi
Journal:  Biomed Opt Express       Date:  2014-12-24       Impact factor: 3.732

7.  Flux or speed? Examining speckle contrast imaging of vascular flows.

Authors:  S M Shams Kazmi; Ehssan Faraji; Mitchell A Davis; Yu-Yen Huang; Xiaojing J Zhang; Andrew K Dunn
Journal:  Biomed Opt Express       Date:  2015-06-18       Impact factor: 3.732

8.  High Bit-Depth Medical Image Compression With HEVC.

Authors:  Saurin S Parikh; Damian Ruiz; Hari Kalva; Gerardo Fernandez-Escribano; Velibor Adzic
Journal:  IEEE J Biomed Health Inform       Date:  2017-01-27       Impact factor: 5.772

9.  Continuous multi-modality brain imaging reveals modified neurovascular seizure response after intervention.

Authors:  Dene Ringuette; Melanie A Jeffrey; Suzie Dufour; Peter L Carlen; Ofer Levi
Journal:  Biomed Opt Express       Date:  2017-01-17       Impact factor: 3.732

10.  Rapid monitoring of cerebral ischemia dynamics using laser-based optical imaging of blood oxygenation and flow.

Authors:  Hart Levy; Dene Ringuette; Ofer Levi
Journal:  Biomed Opt Express       Date:  2012-03-27       Impact factor: 3.732

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