Literature DB >> 30460144

Super-resolution microscopy for biological specimens: lensless phase retrieval in noisy conditions.

Igor Shevkunov1,2, Vladimir Katkovnik1, Nikolay V Petrov2, Karen Egiazarian1.   

Abstract

The paper is devoted to a computational super-resolution microscopy. A complex-valued wavefront of a transparent biological cellular specimen is restored from multiple intensity diffraction patterns registered with noise. For this problem, the recently developed lensless super-resolution phase retrieval algorithm [Optica, 4(7), 786 (2017)] is modified and tuned. This algorithm is based on a random phase coding of the wavefront and on a sparse complex-domain approximation of the specimen. It is demonstrated in experiments, that the reliable phase and amplitude imaging of the specimen is achieved for the low signal-to-noise ratio provided a low dynamic range of observations. The filterings in the observation domain and specimen variables are specific features of the applied algorithm. If these filterings are omitted the algorithm becomes a super-resolution version of the standard iterative phase retrieval algorithms. In comparison with this simplified algorithm with no filterings, our algorithm shows a valuable improvement in imaging with much smaller number of observations and shorter exposure time. In this way, presented algorithm demonstrates ability to work in a low radiation photon-limited mode.

Year:  2018        PMID: 30460144      PMCID: PMC6238936          DOI: 10.1364/BOE.9.005511

Source DB:  PubMed          Journal:  Biomed Opt Express        ISSN: 2156-7085            Impact factor:   3.732


  19 in total

1.  Wavefront reconstruction in digital off-axis holography via sparse coding of amplitude and absolute phase.

Authors:  V Katkovnik; I A Shevkunov; N V Petrov; K Egiazarian
Journal:  Opt Lett       Date:  2015-05-15       Impact factor: 3.776

2.  Effectiveness of iterative algorithms in recovering phase in the presence of noise.

Authors:  Garth Williams; Mark Pfeifer; Ivan Vartanyants; Ian Robinson
Journal:  Acta Crystallogr A       Date:  2006-12-19       Impact factor: 2.290

3.  Phase retrieval using multiple illumination wavelengths.

Authors:  Peng Bao; Fucai Zhang; Giancarlo Pedrini; Wolfgang Osten
Journal:  Opt Lett       Date:  2008-02-15       Impact factor: 3.776

4.  Vibration measurement by temporal Fourier analyses of a digital hologram sequence.

Authors:  Yu Fu; Giancarlo Pedrini; Wolfgang Osten
Journal:  Appl Opt       Date:  2007-08-10       Impact factor: 1.980

5.  Two noise-robust axial scanning multi-image phase retrieval algorithms based on Pauta criterion and smoothness constraint.

Authors:  Cheng Shen; Xuejing Bao; Jiubin Tan; Shutian Liu; Zhengjun Liu
Journal:  Opt Express       Date:  2017-07-10       Impact factor: 3.894

6.  A simple metal staining procedure for identification and visualization of single cells by LA-ICP-MS.

Authors:  A J Herrmann; S Techritz; N Jakubowski; A Haase; A Luch; U Panne; L Mueller
Journal:  Analyst       Date:  2017-04-11       Impact factor: 4.616

7.  Cell density modulates intracellular mass transport in neural networks.

Authors:  Patricia Cintora; Jyothi Arikkath; Mikhail Kandel; Gabriel Popescu; Catherine Best-Popescu
Journal:  Cytometry A       Date:  2017-05-02       Impact factor: 4.355

8.  Proximity operators for phase retrieval.

Authors:  Ferréol Soulez; Éric Thiébaut; Antony Schutz; André Ferrari; Frédéric Courbin; Michael Unser
Journal:  Appl Opt       Date:  2016-09-10       Impact factor: 1.980

9.  Real-time halo correction in phase contrast imaging.

Authors:  Mikhail E Kandel; Michael Fanous; Catherine Best-Popescu; Gabriel Popescu
Journal:  Biomed Opt Express       Date:  2018-01-16       Impact factor: 3.732

10.  Surface relief and refractive index gratings patterned in chalcogenide glasses and studied by off-axis digital holography.

Authors:  V Cazac; A Meshalkin; E Achimova; V Abashkin; V Katkovnik; I Shevkunov; D Claus; G Pedrini
Journal:  Appl Opt       Date:  2018-01-20       Impact factor: 1.980

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  1 in total

1.  Pixel Super-Resolution Phase Retrieval for Lensless On-Chip Microscopy via Accelerated Wirtinger Flow.

Authors:  Yunhui Gao; Feng Yang; Liangcai Cao
Journal:  Cells       Date:  2022-06-22       Impact factor: 7.666

  1 in total

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