Literature DB >> 30444573

Evolutionary and ecological functional genomics, from lab to the wild.

Maricris L Zaidem1, Simon C Groen1, Michael D Purugganan1,2.   

Abstract

Plant phenotypes are the result of both genetic and environmental forces that act to modulate trait expression. Over the last few years, numerous approaches in functional genomics and systems biology have led to a greater understanding of plant phenotypic variation and plant responses to the environment. These approaches, and the questions that they can address, have been loosely termed evolutionary and ecological functional genomics (EEFG), and have been providing key insights on how plants adapt and evolve. In particular, by bringing these studies from the laboratory to the field, EEFG studies allow us to gain greater knowledge of how plants function in their natural contexts.
© 2018 The Authors The Plant Journal © 2018 John Wiley & Sons Ltd.

Keywords:  ecological transcriptome; environment; genome-wide association study mapping; lab-field gap; quantitative trait loci mapping

Mesh:

Year:  2018        PMID: 30444573     DOI: 10.1111/tpj.14167

Source DB:  PubMed          Journal:  Plant J        ISSN: 0960-7412            Impact factor:   6.417


  12 in total

1.  Plant adaptation to climate change - Where are we?

Authors:  Jill Anderson; Bao-Hua Song
Journal:  J Syst Evol       Date:  2020-06-18       Impact factor: 4.098

2.  Evolutionary systems biology reveals patterns of rice adaptation to drought-prone agro-ecosystems.

Authors:  Simon C Groen; Zoé Joly-Lopez; Adrian E Platts; Mignon Natividad; Zoë Fresquez; William M Mauck; Marinell R Quintana; Carlo Leo U Cabral; Rolando O Torres; Rahul Satija; Michael D Purugganan; Amelia Henry
Journal:  Plant Cell       Date:  2022-02-03       Impact factor: 11.277

3.  Studying the genetic basis of masting.

Authors:  Akiko Satake; Dave Kelly
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2021-10-18       Impact factor: 6.237

4.  TagSeq for gene expression in non-model plants: A pilot study at the Santa Rita Experimental Range NEON core site.

Authors:  Hannah E Marx; Stephen Scheidt; Michael S Barker; Katrina M Dlugosch
Journal:  Appl Plant Sci       Date:  2020-11-22       Impact factor: 1.936

Review 5.  Advancing crop genomics from lab to field.

Authors:  Michael D Purugganan; Scott A Jackson
Journal:  Nat Genet       Date:  2021-05-06       Impact factor: 38.330

6.  Transcriptional Variation in Glucosinolate Biosynthetic Genes and Inducible Responses to Aphid Herbivory on Field-Grown Arabidopsis thaliana.

Authors:  Yasuhiro Sato; Ayumi Tezuka; Makoto Kashima; Ayumi Deguchi; Rie Shimizu-Inatsugi; Misako Yamazaki; Kentaro K Shimizu; Atsushi J Nagano
Journal:  Front Genet       Date:  2019-09-11       Impact factor: 4.599

7.  Transcription Profiles of Age-at-Maturity-Associated Genes Suggest Cell Fate Commitment Regulation as a Key Factor in the Atlantic Salmon Maturation Process.

Authors:  Johanna Kurko; Paul V Debes; Andrew H House; Tutku Aykanat; Jaakko Erkinaro; Craig R Primmer
Journal:  G3 (Bethesda)       Date:  2020-01-07       Impact factor: 3.154

Review 8.  Tackling microbial threats in agriculture with integrative imaging and computational approaches.

Authors:  Nikhil Kumar Singh; Anik Dutta; Guido Puccetti; Daniel Croll
Journal:  Comput Struct Biotechnol J       Date:  2020-12-29       Impact factor: 7.271

9.  A nano-biomimetic transformation system enables in planta expression of a reporter gene in mature plants and seeds.

Authors:  Chinenye L Izuegbunam; Nisitha Wijewantha; Beate Wone; Madhavi A Ariyarathne; Grigoriy Sereda; Bernard W M Wone
Journal:  Nanoscale Adv       Date:  2021-04-16

Review 10.  Entailing the Next-Generation Sequencing and Metabolome for Sustainable Agriculture by Improving Plant Tolerance.

Authors:  Muhammad Furqan Ashraf; Dan Hou; Quaid Hussain; Muhammad Imran; Jialong Pei; Mohsin Ali; Aamar Shehzad; Muhammad Anwar; Ali Noman; Muhammad Waseem; Xinchun Lin
Journal:  Int J Mol Sci       Date:  2022-01-07       Impact factor: 5.923

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.