Literature DB >> 30443389

Crystal structure and Hirshfeld surface analysis of dimethyl (3aS,6R,6aS,7S)-2-(2,2,2-tri-fluoro-acet-yl)-2,3-di-hydro-1H,6H,7H-3a,6:7,9a-di-epoxy-benzo[de]iso-quinoline-3a1,6a-di-carboxyl-ate.

Zeliha Atioğlu1, Mehmet Akkurt2, Flavien A A Toze3, Pavel V Dorovatovskii4, Narmina A Guliyeva5, Humay M Panahova6.   

Abstract

The title mol-ecule, C18H16F3NO7, comprises a fused cyclic system containing four five-membered (two di-hydro-furan and two tetra-hydro-furan) rings and one six-membered (piperidine) ring. The five-membered di-hydro-furan and tetra-hydro-furan rings adopt envelope conformations, and the six-membered piperidine ring adopts a distorted chair conformation. Intra-molecular O⋯F inter-actions help to stabilize the conformational arrangement. In the crystal structure, mol-ecules are linked by weak C-H⋯O and C-H⋯F hydrogen bonds, forming a three-dimensional network. The Hirshfeld surface analysis confirms the dominant role of H⋯H contacts in establishing the packing.

Entities:  

Keywords:  Hiershfeld surface analysis; crystal structure; di­hydro­furan ring; fused hexa­cyclic system; piperidine ring; tetra­hydro­furan ring

Year:  2018        PMID: 30443389      PMCID: PMC6218921          DOI: 10.1107/S2056989018014305

Source DB:  PubMed          Journal:  Acta Crystallogr E Crystallogr Commun


Chemical context

Non-covalent inter­actions, such as hydrogen, aerogen, halogen, chalcogen, pnicogen, tetrel and icosa­gen bonds, as well as n–π*, π–π stacking, π–cation, π–anion and hydro­phobic inter­actions, have an impact on the synthesis, catalysis and design of materials and on biological processes (Shikhaliyev et al., 2018 ▸; Hazra et al., 2018 ▸). These weak forces can also control or organize the aggregation, conformation, tertiary and quaternary structure of a mol­ecule, and its stabilization or other particular properties (Legon, 2017 ▸; Mahmudov et al., 2017a ▸,b ▸). In comparison with well-established hydrogen and halogen bonds (Cavallo et al., 2016 ▸; Mahmoudi et al., 2018 ▸; Vandyshev et al., 2017 ▸), chalcogen, pnicogen, tetrel and icosa­gen bonds are much less explored (Mahmudov et al., 2017a ▸; Scheiner, 2013 ▸; Mikherdov et al., 2016 ▸). The title compound, C18H16F3NO7, has a 7-oxabi­cyclo[2.2.1]heptene scaffold, thus making it a potential tool for the design and synthesis of new organic materials with various useful properties such as electronic materials, molecular tweezers, etc (Borisova et al., 2018a ▸,b ▸). During the structure determination, we noted rather unusual intra­molecular O⋯F inter­actions. Here we report the synthesis, mol­ecular and crystal structure of this compound as well as a Hirshfeld surface analysis.

Structural commentary

The mol­ecule of the title compound (Fig. 1 ▸) is made up from a fused cyclic system containing four five-membered rings (two di­hydro­furan and two tetra­hydro­furan) in the usual envelope conformations and a six-membered piperidine ring in a chair conformation. The latter is distorted because the environment of the N1 atom is inter­mediate between trigonal–planar and trigonal–pyramidal. The puckering parameters of the five-membered di­hydro­furan [A (O1/C1/C2/C5/C6), B (O2/C1/C6/C7/C10)] and tetra­hydro­furan [C (O1/C2–C5), D (O2/C7–C10)] rings are A: Q(2) = 0.5780 (15) Å, φ(2) = 359.75 (17)°; B: Q(2) = 0.5737 (16) Å, φ(2) = 4.53 (17)°; C: Q(2) = 0.5173 (15) Å, φ(2) = 179.60 (19)°; D: Q(2) = 0.5154 (16) Å, φ(2) = 178.2 (2)°. The puckering parameters of the six-membered piperidine ring (N1/C1/C2/C10–C12) are Q T = 0.5312 (17) Å, θ = 9.58 (18)°, φ = 329.1 (11)°.
Figure 1

The mol­ecular structure of the title compound. Displacement ellipsoids are drawn at the 30% probability level. Hydrogen atoms are shown as spheres of arbitrary radius.

The mol­ecular conformations are stabilized by weak intra­molecular C—H⋯O and C—H⋯F inter­actions (Table 1 ▸) between methyl­ene groups (C11; C12) and a meth­oxy group and the –CF3 group, respectively. A rather unusual intra­molecular O⋯F inter­action between one of the oxygen bridgehead atoms (O1) and one of the F atoms of the –CF3 group [C5—O1⋯F2 = 2.9336 (16) Å; C5—O1⋯F2 = 153.60 (9)°] might help to consolidate the conformational arrangement.
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
C4—H4⋯O3i 0.952.443.116 (2)128
C5—H5⋯O2ii 1.002.603.1960 (19)118
C7—H7⋯O1ii 1.002.543.2091 (19)124
C11—H11B⋯O40.992.573.093 (2)113
C12—H12A⋯O7iii 0.992.523.328 (2)138
C12—H12B⋯O5iii 0.992.343.030 (2)127
C12—H12B⋯F10.992.403.043 (2)122
C12—H12B⋯F20.992.332.962 (2)121
C16—H16A⋯F3iv 0.982.623.475 (2)146

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

Supra­molecular features

Inter­molecular C—H⋯O inter­actions involving the O atoms of carbonyl groups, the oxygen bridgehead atoms and meth­oxy O atoms, as well as C—H⋯F hydrogen bonds define the crystal packing, which is shown in Fig. 2 ▸. These packing features lead to the formation of a three-dimensional network structure. C—H⋯π and π–π inter­actions are not observed, but H⋯H inter­actions dominate in the packing as detailed in the next section.
Figure 2

The crystal structure of the title compound in a view along [100], emphasizing the inter­molecular C—H⋯O and C—H⋯F hydrogen bonds (dashed lines).

Hirshfeld surface analysis

Hirshfeld surface and fingerprint plots were generated using CrystalExplorer (McKinnon et al., 2007 ▸). Hirshfeld surfaces enable the visualization of inter­molecular inter­actions by different colors and color intensity, representing short or long contacts and indicating the relative strength of the inter­actions. Fig. 3 ▸ shows the Hirshfeld surface of the title compound mapped over d norm where it is evident from the bright-red spots appearing near the oxygen atoms that these atoms play a significant role in the mol­ecular packing. The red spots represent closer contacts and negative d norm values on the surface, corresponding to the C—H⋯O inter­actions. The percentage contributions of various contacts to the total Hirshfeld surface are given in Table 2 ▸ and are also shown as two-dimensional fingerprint plots in Fig. 4 ▸. The H⋯H inter­actions appear in the middle of the scattered points in the two-dimensional fingerprint plots with an overall contribution to the Hirshfeld surface of 35.6% (Fig. 4 ▸ b). The contribution from the O⋯H/H⋯O contacts, corresponding to C—H⋯O inter­actions, is represented by a pair of sharp spikes characteristic of a strong hydrogen-bonding inter­action (28.5%; Fig. 4 ▸ c). The contribution of the F⋯H/H⋯F inter­molecular contacts to the Hirshfeld surfaces is 23.8% (Fig. 4 ▸ d). The small percentage contributions from the remaining inter­atomic contacts are summarized in Table 2 ▸ and indicated by their fingerprint plots for C⋯H/H⋯C (Fig. 4 ▸ e), F⋯F (Fig. 4 ▸ f), F⋯O/O⋯F (Fig. 4 ▸ g), O⋯O (Fig. 4 ▸ h), N⋯H/H⋯N (Fig. 4 ▸ i) and C⋯O/O⋯C (Fig. 4 ▸ j). The large number of H⋯H, O⋯H/H⋯O and F⋯H/H⋯F inter­actions suggest that van der Waals inter­actions and hydrogen bonding play the major roles in the crystal packing (Hathwar et al., 2015 ▸).
Figure 3

Hirshfeld surface of the title compound mapped over d norm.

Table 2

Percentage contributions of inter­atomic contacts to the Hirshfeld surface for the title compound

ContactPercentage contribution
H⋯H35.6
O⋯H/H⋯O28.5
F⋯H/H⋯F23.8
C⋯H/H⋯C5.5
F⋯F2.7
F⋯O/O⋯F1.6
N⋯H/H⋯N1.1
O⋯O1.1
C⋯O/O⋯C0.2
Figure 4

The two-dimensional fingerprint plots of the title compound, showing (a) all inter­actions, and delineated into (b) H⋯H, (c) O⋯H/ H⋯O, (d) F⋯H/H⋯F, (e) C⋯H/H⋯C, (f) F⋯F, (g) F⋯O/O⋯F, (h) O⋯O, (i) N⋯H/H⋯N and (j) C⋯O/O⋯C inter­actions [d e and d i represent the distances from a point on the Hirshfeld surface to the nearest atoms outside (external) and inside (inter­nal) the surface, respectively].

Database survey

A search of the Cambridge Structural Database (Version 5.39; Groom et al., 2016 ▸) for similar structures showed the two closest are those of 2-benzyl-6a,9b-bis­(tri­fluoro­meth­yl)-2,3,6a,9b-tetra­hydro-1H,6H,7H-3a,6:7,9a-di­epoxy­benzo[de]iso­quinoline (CSD refcode HENLAQ; Borisova et al., 2018c ▸) and 2-benzyl-4,5-bis­(tri­fluoro­meth­yl)-2,3,6a,9b-tetra­hydro-1H,6H,7H-3a,6:7,9a-di­epoxy­benzo[de]iso­quinoline (HEN­LEU; Borisova et al., 2018d ▸). In the crystal of HENLAQ, inversion-related pairs of mol­ecules are linked into dimers by C—H⋯O hydrogen bonds. These dimers form sheets lying parallel to (100). C—H⋯π inter­actions are also observed in the crystal structure of HENLAQ, together with intra­molecular F⋯F contacts. The asymmetric unit of HENLEU contains two mol­ecules. In the crystal, mol­ecules are linked by C—H⋯O and C—H⋯F hydrogen bonds, forming columns along [010]. Likewise, C—H⋯π inter­actions and F⋯F intra­molecular contacts are also present.

Synthesis and crystallization

The synthesis of the title compound and its characterization by 1H NMR, 13C NMR, IR and HRMS spectroscopy have previously been reported (Borisova et al., 2018a ▸). Dimethyl acetyl­enedi­carboxyl­ate (DMAD, 1.84 ml, 0.015 mol) was added to a solution of 2,2,2-tri­fluoro-N,N-bis­(furan-2-yl­meth­yl)acetamide (0.01 mol) in benzene (30 ml). The mixture was heated at reflux for 15.5–40 h at 353 K (GC–MS monitoring until disappearance of the starting material). The reaction mixture was cooled and left overnight at room temperature. The solvent was removed under reduced pressure. The residue (brown oil) was triturated with diethyl ether. The obtained crystals were filtered off and recrystallized from hexa­ne/EtOAc (v:v = 2:1) to give the pure compound as a white powder (2.57 g, 6.2 mmol, yield 62%). R f = 0.56 (EtOAc/hexane, 2:1, Sorbfil). M.p. 467.2–467.9 K (from hexa­ne/EtOAc). 1H NMR (400 MHz, CDCl3): δ 6.74–6.71 (2H, m, H-4 and H-9), 6.46 (2H, dd, J = 2.3 and J = 5.5 Hz, H-5 and H-8), 5.14 (2H, br s, H-6 and H-7), 5.10 (1H, d, J = 14.9 Hz, H-1A), 4.43 (1H, br d, J = 14.9 Hz, H-3A), 4.08 (1H, d, J = 14.9 Hz, H-3B), 3.64 (6H, s, 2 × CO2Me), 3.59 (1H, d, J = 14.9, H-1B). 13C NMR (100 MHz, CDCl3): δ 170.1 (2 × CO2Me), 157.2 (q, J = 35.5 Hz, F3C—C), 141.2 (C-5 and C-8), 137.5 (C-4 and C-9), 116.4 (q, J = 288.1 Hz, CF3), 87.1 (C-3a and C-9a), 83.8 (C-6 and C-7), 71.4 and 68.8 (C-9 and C-6a), 52.4 (2 × CO2Me), 44.8 (q, J = 3.8 Hz, C-1), 42.4 (C-3). 19F NMR (282 MHz, CDCl3): δ −67.7 (s, CF3). IR νmax/cm−1 (KBr): 3109, 3055, 2956, 1713, 1688, 1197. HRMS (ESI–TOF): calculated for C18H16F3NO7 [M + H]+, 415.0879; found, 415.0889.

Refinement details

Crystal data, data collection and structure refinement details are summarized in Table 3 ▸. All H atoms were fixed and allowed to ride on the parent atoms, with C—H = 0.95–1.00 Å, and with U iso(H) = 1.5U eq(C) for methyl H atoms and 1.2U eq(C) for all other H atoms. Eight outliers [(101), (011), (01), (002), (110), (363), (03), (111)] were omitted in the final cycles of refinement.
Table 3

Experimental details

Crystal data
Chemical formulaC18H16F3NO7
M r 415.32
Crystal system, space groupMonoclinic, P21/n
Temperature (K)150
a, b, c (Å)8.7661 (2), 11.2908 (3), 17.5089 (4)
β (°)96.021 (1)
V3)1723.41 (7)
Z 4
Radiation typeMo Kα
μ (mm−1)0.14
Crystal size (mm)0.35 × 0.32 × 0.30
 
Data collection
DiffractometerBruker APEXII CCD
Absorption correctionMulti-scan (SADABS; Krause et al., 2015)
T min, T max 0.942, 0.946
No. of measured, independent and observed [I > 2σ(I)] reflections11170, 3496, 2739
R int 0.028
(sin θ/λ)max−1)0.626
 
Refinement
R[F 2 > 2σ(F 2)], wR(F 2), S 0.036, 0.091, 1.01
No. of reflections3496
No. of parameters264
H-atom treatmentH-atom parameters constrained
Δρmax, Δρmin (e Å−3)0.30, −0.25

Computer programs: APEX2 and SAINT (Bruker, 2007 ▸), SHELXS97 (Sheldrick, 2008 ▸), SHELXL2014 (Sheldrick, 2015 ▸), ORTEP-3 for Windows (Farrugia, 2012 ▸) and PLATON (Spek, 2009 ▸).

Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S2056989018014305/wm5463sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989018014305/wm5463Isup2.hkl CCDC reference: 1872524 Additional supporting information: crystallographic information; 3D view; checkCIF report
C18H16F3NO7F(000) = 856
Mr = 415.32Dx = 1.601 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
a = 8.7661 (2) ÅCell parameters from 3572 reflections
b = 11.2908 (3) Åθ = 3.0–25.9°
c = 17.5089 (4) ŵ = 0.14 mm1
β = 96.021 (1)°T = 150 K
V = 1723.41 (7) Å3Block, colourless
Z = 40.35 × 0.32 × 0.30 mm
Bruker APEXII CCD diffractometer2739 reflections with I > 2σ(I)
φ and ω scansRint = 0.028
Absorption correction: multi-scan (SADABS; Krause et al., 2015)θmax = 26.4°, θmin = 3.1°
Tmin = 0.942, Tmax = 0.946h = −10→10
11170 measured reflectionsk = −14→11
3496 independent reflectionsl = −21→20
Refinement on F20 restraints
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.036H-atom parameters constrained
wR(F2) = 0.091w = 1/[σ2(Fo2) + (0.0391P)2 + 0.8462P] where P = (Fo2 + 2Fc2)/3
S = 1.01(Δ/σ)max < 0.001
3496 reflectionsΔρmax = 0.30 e Å3
264 parametersΔρmin = −0.25 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
xyzUiso*/Ueq
C10.39473 (17)0.49611 (14)0.67777 (9)0.0151 (3)
C20.34636 (17)0.36454 (14)0.65512 (9)0.0159 (3)
C30.17517 (18)0.35392 (15)0.66061 (10)0.0188 (4)
H30.1259100.3137750.6989180.023*
C40.10926 (18)0.41275 (15)0.60044 (9)0.0190 (4)
H40.0024140.4230580.5864880.023*
C50.23948 (17)0.46040 (14)0.55824 (9)0.0166 (3)
H50.2111340.4781430.5026040.020*
C60.31682 (17)0.56580 (14)0.60653 (9)0.0156 (3)
C70.46580 (18)0.61837 (14)0.57545 (9)0.0181 (3)
H70.4506250.6485140.5214780.022*
C80.53785 (19)0.70697 (16)0.63430 (10)0.0223 (4)
H80.5349380.7909010.6305650.027*
C90.60537 (19)0.64310 (16)0.69172 (10)0.0215 (4)
H90.6630540.6713590.7370220.026*
C100.57077 (18)0.51491 (15)0.66959 (9)0.0173 (3)
C110.67413 (18)0.41488 (15)0.70014 (9)0.0196 (4)
H11A0.7779070.4264650.6838860.023*
H11B0.6830280.4151790.7569800.023*
C120.45739 (18)0.27365 (15)0.69121 (9)0.0187 (3)
H12A0.4565180.2747150.7477040.022*
H12B0.4262480.1936470.6723940.022*
C130.68211 (18)0.24366 (16)0.61696 (10)0.0213 (4)
C140.61562 (19)0.12361 (17)0.58786 (11)0.0268 (4)
C150.34324 (19)0.52840 (15)0.75488 (9)0.0187 (4)
C160.4132 (2)0.54441 (18)0.88782 (9)0.0294 (4)
H16A0.5023780.5353760.9260900.044*
H16B0.3322650.4895670.8996230.044*
H16C0.3751060.6259210.8889220.044*
C170.20610 (18)0.66654 (15)0.61749 (9)0.0171 (3)
C18−0.0373 (2)0.74427 (17)0.57152 (12)0.0332 (5)
H18A−0.1363390.7162490.5470190.050*
H18B−0.0014220.8104910.5419280.050*
H18C−0.0489090.7706800.6239100.050*
N10.61226 (15)0.30034 (12)0.67137 (8)0.0174 (3)
O10.35051 (12)0.36756 (10)0.57348 (6)0.0157 (2)
O20.57083 (12)0.52159 (10)0.58756 (6)0.0171 (3)
O30.79898 (15)0.27623 (13)0.59189 (8)0.0386 (4)
O40.45760 (13)0.51821 (11)0.81186 (6)0.0234 (3)
O50.21495 (14)0.55547 (12)0.76498 (7)0.0274 (3)
O60.07292 (13)0.64922 (10)0.57403 (7)0.0226 (3)
O70.23490 (14)0.75410 (11)0.65517 (7)0.0263 (3)
F10.60895 (14)0.04589 (10)0.64497 (7)0.0422 (3)
F20.47566 (12)0.13074 (10)0.55061 (6)0.0350 (3)
F30.70476 (14)0.07621 (12)0.53923 (8)0.0509 (4)
U11U22U33U12U13U23
C10.0169 (8)0.0155 (8)0.0130 (8)−0.0009 (6)0.0023 (6)−0.0006 (6)
C20.0181 (8)0.0163 (8)0.0139 (8)−0.0018 (6)0.0051 (6)−0.0002 (6)
C30.0172 (8)0.0149 (8)0.0254 (9)−0.0042 (6)0.0082 (7)−0.0020 (7)
C40.0163 (8)0.0167 (9)0.0244 (9)−0.0025 (6)0.0033 (6)−0.0048 (7)
C50.0173 (8)0.0169 (8)0.0153 (8)0.0008 (6)0.0002 (6)−0.0011 (7)
C60.0185 (8)0.0150 (8)0.0134 (8)−0.0012 (6)0.0022 (6)−0.0005 (6)
C70.0199 (8)0.0168 (9)0.0179 (8)−0.0009 (6)0.0039 (6)0.0027 (7)
C80.0226 (9)0.0184 (9)0.0268 (9)−0.0068 (7)0.0060 (7)−0.0007 (7)
C90.0213 (8)0.0222 (9)0.0205 (9)−0.0071 (7)−0.0002 (7)−0.0038 (7)
C100.0191 (8)0.0184 (9)0.0144 (8)−0.0048 (6)0.0024 (6)−0.0019 (7)
C110.0173 (8)0.0230 (9)0.0180 (8)−0.0029 (7)−0.0003 (6)−0.0014 (7)
C120.0181 (8)0.0198 (9)0.0193 (8)−0.0011 (7)0.0064 (6)0.0027 (7)
C130.0171 (8)0.0241 (10)0.0225 (9)0.0007 (7)0.0020 (7)−0.0008 (7)
C140.0226 (9)0.0268 (10)0.0315 (10)0.0019 (7)0.0048 (7)−0.0048 (8)
C150.0254 (9)0.0149 (8)0.0161 (8)−0.0005 (7)0.0042 (7)0.0006 (7)
C160.0470 (11)0.0304 (11)0.0114 (8)0.0037 (9)0.0057 (8)−0.0025 (8)
C170.0211 (8)0.0172 (9)0.0131 (8)−0.0012 (6)0.0030 (6)0.0016 (7)
C180.0299 (10)0.0263 (11)0.0409 (11)0.0115 (8)−0.0074 (8)−0.0080 (9)
N10.0158 (7)0.0180 (7)0.0184 (7)−0.0010 (5)0.0016 (5)0.0014 (6)
O10.0176 (5)0.0157 (6)0.0141 (6)−0.0001 (4)0.0034 (4)−0.0016 (4)
O20.0170 (6)0.0201 (6)0.0148 (6)−0.0021 (5)0.0039 (4)0.0005 (5)
O30.0259 (7)0.0424 (9)0.0509 (9)−0.0105 (6)0.0205 (6)−0.0156 (7)
O40.0297 (7)0.0287 (7)0.0116 (6)0.0004 (5)0.0019 (5)−0.0020 (5)
O50.0296 (7)0.0322 (8)0.0215 (6)0.0095 (6)0.0086 (5)−0.0015 (5)
O60.0212 (6)0.0194 (6)0.0261 (6)0.0044 (5)−0.0023 (5)−0.0039 (5)
O70.0296 (7)0.0210 (7)0.0272 (7)0.0035 (5)−0.0020 (5)−0.0069 (5)
F10.0515 (7)0.0218 (6)0.0523 (8)0.0029 (5)0.0002 (6)0.0056 (5)
F20.0279 (6)0.0320 (6)0.0427 (7)−0.0024 (5)−0.0073 (5)−0.0102 (5)
F30.0405 (7)0.0496 (8)0.0662 (9)−0.0048 (6)0.0225 (6)−0.0341 (7)
C1—C151.512 (2)C11—N11.471 (2)
C1—C61.569 (2)C11—H11A0.9900
C1—C101.579 (2)C11—H11B0.9900
C1—C21.584 (2)C12—N11.467 (2)
C2—O11.4341 (19)C12—H12A0.9900
C2—C121.507 (2)C12—H12B0.9900
C2—C31.519 (2)C13—O31.213 (2)
C3—C41.326 (2)C13—N11.347 (2)
C3—H30.9500C13—C141.541 (3)
C4—C51.522 (2)C14—F31.327 (2)
C4—H40.9500C14—F21.330 (2)
C5—O11.4363 (19)C14—F11.336 (2)
C5—C61.572 (2)C15—O51.196 (2)
C5—H51.0000C15—O41.343 (2)
C6—C171.520 (2)C16—O41.455 (2)
C6—C71.582 (2)C16—H16A0.9800
C7—O21.4303 (19)C16—H16B0.9800
C7—C81.525 (2)C16—H16C0.9800
C7—H71.0000C17—O71.2006 (19)
C8—C91.325 (2)C17—O61.3393 (19)
C8—H80.9500C18—O61.441 (2)
C9—C101.521 (2)C18—H18A0.9800
C9—H90.9500C18—H18B0.9800
C10—O21.4382 (19)C18—H18C0.9800
C10—C111.510 (2)
C15—C1—C6116.28 (13)C9—C10—C1106.00 (13)
C15—C1—C10115.76 (13)N1—C11—C10110.50 (12)
C6—C1—C10102.03 (12)N1—C11—H11A109.5
C15—C1—C2110.64 (13)C10—C11—H11A109.5
C6—C1—C2100.86 (12)N1—C11—H11B109.5
C10—C1—C2109.99 (12)C10—C11—H11B109.5
O1—C2—C12110.57 (12)H11A—C11—H11B108.1
O1—C2—C3101.16 (12)N1—C12—C2109.50 (13)
C12—C2—C3121.25 (13)N1—C12—H12A109.8
O1—C2—C1101.14 (11)C2—C12—H12A109.8
C12—C2—C1112.92 (13)N1—C12—H12B109.8
C3—C2—C1107.37 (13)C2—C12—H12B109.8
C4—C3—C2105.15 (14)H12A—C12—H12B108.2
C4—C3—H3127.4O3—C13—N1125.15 (16)
C2—C3—H3127.4O3—C13—C14116.83 (15)
C3—C4—C5106.05 (14)N1—C13—C14117.88 (14)
C3—C4—H4127.0F3—C14—F2106.54 (15)
C5—C4—H4127.0F3—C14—F1106.87 (16)
O1—C5—C4100.37 (12)F2—C14—F1107.23 (14)
O1—C5—C6101.94 (12)F3—C14—C13109.82 (14)
C4—C5—C6108.05 (13)F2—C14—C13113.97 (15)
O1—C5—H5114.9F1—C14—C13112.02 (15)
C4—C5—H5114.9O5—C15—O4123.51 (15)
C6—C5—H5114.9O5—C15—C1124.53 (15)
C17—C6—C1120.34 (13)O4—C15—C1111.90 (14)
C17—C6—C5112.90 (13)O4—C16—H16A109.5
C1—C6—C5100.09 (12)O4—C16—H16B109.5
C17—C6—C7108.88 (13)H16A—C16—H16B109.5
C1—C6—C798.94 (12)O4—C16—H16C109.5
C5—C6—C7115.09 (13)H16A—C16—H16C109.5
O2—C7—C8100.74 (12)H16B—C16—H16C109.5
O2—C7—C6101.77 (12)O7—C17—O6123.57 (15)
C8—C7—C6108.18 (13)O7—C17—C6125.81 (15)
O2—C7—H7114.8O6—C17—C6110.43 (13)
C8—C7—H7114.8O6—C18—H18A109.5
C6—C7—H7114.8O6—C18—H18B109.5
C9—C8—C7106.02 (15)H18A—C18—H18B109.5
C9—C8—H8127.0O6—C18—H18C109.5
C7—C8—H8127.0H18A—C18—H18C109.5
C8—C9—C10105.27 (14)H18B—C18—H18C109.5
C8—C9—H9127.4C13—N1—C12124.77 (14)
C10—C9—H9127.4C13—N1—C11118.78 (13)
O2—C10—C11109.26 (13)C12—N1—C11114.62 (13)
O2—C10—C9100.58 (13)C2—O1—C596.60 (11)
C11—C10—C9121.69 (14)C7—O2—C1096.93 (11)
O2—C10—C1101.56 (11)C15—O4—C16114.29 (13)
C11—C10—C1115.03 (13)C17—O6—C18116.74 (13)
C15—C1—C2—O1158.98 (12)C6—C1—C10—C973.08 (14)
C6—C1—C2—O135.33 (13)C2—C1—C10—C9179.49 (12)
C10—C1—C2—O1−71.87 (14)O2—C10—C11—N1−65.07 (16)
C15—C1—C2—C12−82.85 (16)C9—C10—C11—N1178.56 (14)
C6—C1—C2—C12153.50 (12)C1—C10—C11—N148.35 (17)
C10—C1—C2—C1246.30 (16)O1—C2—C12—N157.13 (17)
C15—C1—C2—C353.42 (16)C3—C2—C12—N1175.15 (14)
C6—C1—C2—C3−70.24 (14)C1—C2—C12—N1−55.37 (17)
C10—C1—C2—C3−177.43 (13)O3—C13—C14—F30.8 (2)
O1—C2—C3—C4−32.33 (16)N1—C13—C14—F3−175.17 (15)
C12—C2—C3—C4−154.93 (15)O3—C13—C14—F2−118.68 (18)
C1—C2—C3—C473.22 (16)N1—C13—C14—F265.4 (2)
C2—C3—C4—C5−0.44 (17)O3—C13—C14—F1119.35 (18)
C3—C4—C5—O132.93 (16)N1—C13—C14—F1−56.6 (2)
C3—C4—C5—C6−73.38 (16)C6—C1—C15—O535.8 (2)
C15—C1—C6—C174.8 (2)C10—C1—C15—O5155.57 (16)
C10—C1—C6—C17−122.10 (14)C2—C1—C15—O5−78.4 (2)
C2—C1—C6—C17124.52 (14)C6—C1—C15—O4−146.90 (14)
C15—C1—C6—C5−119.37 (14)C10—C1—C15—O4−27.14 (19)
C10—C1—C6—C5113.70 (12)C2—C1—C15—O498.85 (15)
C2—C1—C6—C50.31 (13)C1—C6—C17—O758.2 (2)
C15—C1—C6—C7122.99 (14)C5—C6—C17—O7176.13 (15)
C10—C1—C6—C7−3.95 (14)C7—C6—C17—O7−54.7 (2)
C2—C1—C6—C7−117.33 (12)C1—C6—C17—O6−126.65 (15)
O1—C5—C6—C17−165.16 (12)C5—C6—C17—O6−8.77 (18)
C4—C5—C6—C17−59.95 (17)C7—C6—C17—O6120.36 (14)
O1—C5—C6—C1−35.94 (13)O3—C13—N1—C12167.96 (17)
C4—C5—C6—C169.27 (14)C14—C13—N1—C12−16.5 (2)
O1—C5—C6—C768.99 (15)O3—C13—N1—C114.3 (3)
C4—C5—C6—C7174.20 (13)C14—C13—N1—C11179.81 (14)
C17—C6—C7—O2165.38 (12)C2—C12—N1—C13−101.78 (18)
C1—C6—C7—O238.92 (14)C2—C12—N1—C1162.52 (17)
C5—C6—C7—O2−66.71 (16)C10—C11—N1—C13106.74 (16)
C17—C6—C7—C859.79 (16)C10—C11—N1—C12−58.57 (17)
C1—C6—C7—C8−66.68 (15)C12—C2—O1—C5−178.88 (12)
C5—C6—C7—C8−172.31 (13)C3—C2—O1—C551.41 (13)
O2—C7—C8—C9−31.04 (16)C1—C2—O1—C5−59.02 (12)
C6—C7—C8—C975.27 (16)C4—C5—O1—C2−51.23 (13)
C7—C8—C9—C10−1.76 (17)C6—C5—O1—C259.90 (13)
C8—C9—C10—O233.85 (16)C8—C7—O2—C1050.57 (13)
C8—C9—C10—C11154.49 (15)C6—C7—O2—C10−60.77 (13)
C8—C9—C10—C1−71.55 (16)C11—C10—O2—C7179.05 (12)
C15—C1—C10—O2−158.88 (13)C9—C10—O2—C7−51.80 (13)
C6—C1—C10—O2−31.61 (14)C1—C10—O2—C757.12 (13)
C2—C1—C10—O274.81 (14)O5—C15—O4—C16−0.7 (2)
C15—C1—C10—C1183.27 (17)C1—C15—O4—C16−178.05 (14)
C6—C1—C10—C11−149.45 (13)O7—C17—O6—C182.2 (2)
C2—C1—C10—C11−43.04 (17)C6—C17—O6—C18−173.02 (14)
C15—C1—C10—C9−54.19 (17)
D—H···AD—HH···AD···AD—H···A
C4—H4···O3i0.952.443.116 (2)128
C5—H5···O2ii1.002.603.1960 (19)118
C7—H7···O1ii1.002.543.2091 (19)124
C11—H11B···O40.992.573.093 (2)113
C12—H12A···O7iii0.992.523.328 (2)138
C12—H12B···O5iii0.992.343.030 (2)127
C12—H12B···F10.992.403.043 (2)122
C12—H12B···F20.992.332.962 (2)121
C16—H16A···F3iv0.982.623.475 (2)146
  12 in total

1.  Towards quantitative analysis of intermolecular interactions with Hirshfeld surfaces.

Authors:  Joshua J McKinnon; Dylan Jayatilaka; Mark A Spackman
Journal:  Chem Commun (Camb)       Date:  2007-10-07       Impact factor: 6.222

2.  Tetrel, pnictogen and chalcogen bonds identified in the gas phase before they had names: a systematic look at non-covalent interactions.

Authors:  Anthony C Legon
Journal:  Phys Chem Chem Phys       Date:  2017-06-14       Impact factor: 3.676

3.  Chalcogen bonding in synthesis, catalysis and design of materials.

Authors:  Kamran T Mahmudov; Maximilian N Kopylovich; M Fátima C Guedes da Silva; Armando J L Pombeiro
Journal:  Dalton Trans       Date:  2017-08-08       Impact factor: 4.390

4.  The pnicogen bond: its relation to hydrogen, halogen, and other noncovalent bonds.

Authors:  Steve Scheiner
Journal:  Acc Chem Res       Date:  2012-11-07       Impact factor: 22.384

5.  Comparison of silver and molybdenum microfocus X-ray sources for single-crystal structure determination.

Authors:  Lennard Krause; Regine Herbst-Irmer; George M Sheldrick; Dietmar Stalke
Journal:  J Appl Crystallogr       Date:  2015-01-30       Impact factor: 3.304

6.  Crystal structure refinement with SHELXL.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr C Struct Chem       Date:  2015-01-01       Impact factor: 1.172

Review 7.  The Halogen Bond.

Authors:  Gabriella Cavallo; Pierangelo Metrangolo; Roberto Milani; Tullio Pilati; Arri Priimagi; Giuseppe Resnati; Giancarlo Terraneo
Journal:  Chem Rev       Date:  2016-01-26       Impact factor: 60.622

8.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20

9.  Quantitative analysis of intermolecular interactions in orthorhombic rubrene.

Authors:  Venkatesha R Hathwar; Mattia Sist; Mads R V Jørgensen; Aref H Mamakhel; Xiaoping Wang; Christina M Hoffmann; Kunihisa Sugimoto; Jacob Overgaard; Bo Brummerstedt Iversen
Journal:  IUCrJ       Date:  2015-08-14       Impact factor: 4.769

10.  The Cambridge Structural Database.

Authors:  Colin R Groom; Ian J Bruno; Matthew P Lightfoot; Suzanna C Ward
Journal:  Acta Crystallogr B Struct Sci Cryst Eng Mater       Date:  2016-04-01
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