Literature DB >> 30441733

Modeling Nonlinear Synaptic Dynamics: A Laguerre-Volterra Network Framework for Improved Computational Efficiency in Large Scale Simulations.

Eric Y Hu, Gene Yu, Dong Song, C Jean-Marie Bouteiller, W Theodore Berger.   

Abstract

Synapses are key components in signal transmission in the brain, often exhibiting complex non-linear dynamics. Yet, they are often crudely modelled as linear exponential equations in large-scale neuron network simulations. Mechanistic models that use detailed channel receptor kinetics more closely replicate the nonlinear dynamics observed at synapses, but use of such models are generally restricted to small scale simulations due to their computational complexity. Previously, we have developed an ``input-output'' (IO) synapse model using the Volterra functional series to estimate nonlinear synaptic dynamics. Here, we present an improvement on the IO synapse model using the extbf{Laguerre-Volterra network (LVN) framework. We demonstrate that utilization of the LVN framework helps reduce memory requirements and improves the simulation speed in comparison to the previous iteration of the IO synapse model. We present results that demonstrate the accuracy, memory efficiency, and speed of the LVN model that can be extended to simulations with large numbers of synapses. Our efforts enable complex nonlinear synaptic dynamics to be modelled in large-scale network models, allowing us to explore how synaptic activity may influence network behavior and affects memory, learning, and neurodegenerative diseases.

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Year:  2018        PMID: 30441733      PMCID: PMC6462142          DOI: 10.1109/EMBC.2018.8513616

Source DB:  PubMed          Journal:  Annu Int Conf IEEE Eng Med Biol Soc        ISSN: 2375-7477


  5 in total

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Authors:  Viviane S Ghaderi; Sushmita L Allam; N Ambert; J-M C Bouteiller; J Choma; T W Berger
Journal:  Conf Proc IEEE Eng Med Biol Soc       Date:  2011

2.  Methodology of Recurrent Laguerre-Volterra Network for Modeling Nonlinear Dynamic Systems.

Authors:  Kunling Geng; Vasilis Z Marmarelis
Journal:  IEEE Trans Neural Netw Learn Syst       Date:  2016-06-24       Impact factor: 10.451

3.  Integrated multiscale modeling of the nervous system: predicting changes in hippocampal network activity by a positive AMPA receptor modulator.

Authors:  Jean-Marie C Bouteiller; Sushmita L Allam; Eric Y Hu; Renaud Greget; Nicolas Ambert; Anne Florence Keller; Serge Bischoff; Michel Baudry; Theodore W Berger
Journal:  IEEE Trans Biomed Eng       Date:  2011-06-02       Impact factor: 4.538

4.  The Neurobiological Basis of Cognition: Identification by Multi-Input, Multioutput Nonlinear Dynamic Modeling: A method is proposed for measuring and modeling human long-term memory formation by mathematical analysis and computer simulation of nerve-cell dynamics.

Authors:  Theodore W Berger; Dong Song; Rosa H M Chan; Vasilis Z Marmarelis
Journal:  Proc IEEE Inst Electr Electron Eng       Date:  2010-03-04       Impact factor: 10.961

5.  Volterra representation enables modeling of complex synaptic nonlinear dynamics in large-scale simulations.

Authors:  Eric Y Hu; Jean-Marie C Bouteiller; Dong Song; Michel Baudry; Theodore W Berger
Journal:  Front Comput Neurosci       Date:  2015-09-17       Impact factor: 2.380

  5 in total
  1 in total

1.  Bridging Hierarchies in Multi-Scale Models of Neural Systems: Look-Up Tables Enable Computationally Efficient Simulations of Non-linear Synaptic Dynamics.

Authors:  Duy-Tan J Pham; Gene J Yu; Jean-Marie C Bouteiller; Theodore W Berger
Journal:  Front Comput Neurosci       Date:  2021-10-01       Impact factor: 3.387

  1 in total

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