Literature DB >> 3043666

Characterization of a helical protein designed from first principles.

L Regan1, W F DeGrado.   

Abstract

The question of how the primary amino acid sequence of a protein determines its three-dimensional structure is still unanswered. One approach to this problem involves the de novo design of model peptides and proteins that should adopt desired three-dimensional structures. A systematic approach was aimed at the design of a four-helix bundle protein. The gene encoding the designed protein was synthesized and the protein was expressed in Escherichia coli and purified to homogeneity. The protein was shown to be monomeric, highly helical, and very stable to denaturation by guanidine hydrochloride (GuHCl). Thus a globular protein has been designed that is capable of adopting a stable, folded structure in aqueous solution.

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Year:  1988        PMID: 3043666     DOI: 10.1126/science.3043666

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  112 in total

1.  Three-helix-bundle protein in a Ramachandran model.

Authors:  A Irbäck; F Sjunnesson; S Wallin
Journal:  Proc Natl Acad Sci U S A       Date:  2000-12-05       Impact factor: 11.205

2.  Diffusion-collision model study of misfolding in a four-helix bundle protein.

Authors:  C Beck; X Siemens; D L Weaver
Journal:  Biophys J       Date:  2001-12       Impact factor: 4.033

3.  Accommodation of a highly symmetric core within a symmetric protein superfold.

Authors:  Stephen R Brych; Jaewon Kim; Timothy M Logan; Michael Blaber
Journal:  Protein Sci       Date:  2003-12       Impact factor: 6.725

4.  Combinatorial mutagenesis to restrict amino acid usage in an enzyme to a reduced set.

Authors:  Satoshi Akanuma; Takanori Kigawa; Shigeyuki Yokoyama
Journal:  Proc Natl Acad Sci U S A       Date:  2002-10-02       Impact factor: 11.205

5.  Stably folded de novo proteins from a designed combinatorial library.

Authors:  Yinan Wei; Tun Liu; Stephen L Sazinsky; David A Moffet; István Pelczer; Michael H Hecht
Journal:  Protein Sci       Date:  2003-01       Impact factor: 6.725

6.  Folding kinetics of designer proteins. Application of the diffusion-collision model to a de novo designed four-helix bundle.

Authors:  K K Yapa; D L Weaver
Journal:  Biophys J       Date:  1992-07       Impact factor: 4.033

Review 7.  Probing the structure of the Neurospora crassa plasma membrane H(+)-ATPase.

Authors:  G A Scarborough
Journal:  Mol Cell Biochem       Date:  1992-09-08       Impact factor: 3.396

8.  A de novo redesign of the WW domain.

Authors:  Christina M Kraemer-Pecore; Juliette T J Lecomte; John R Desjarlais
Journal:  Protein Sci       Date:  2003-10       Impact factor: 6.725

9.  Improved side-chain prediction accuracy using an ab initio potential energy function and a very large rotamer library.

Authors:  Ronald W Peterson; P Leslie Dutton; A Joshua Wand
Journal:  Protein Sci       Date:  2004-03       Impact factor: 6.725

10.  Theory for protein folding cooperativity: helix bundles.

Authors:  Kingshuk Ghosh; K A Dill
Journal:  J Am Chem Soc       Date:  2009-02-18       Impact factor: 15.419

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