Literature DB >> 30431218

Whole exome sequencing in the diagnostic workup of patients with a bleeding diathesis.

Joline L Saes1,2, Annet Simons3, Sonja A de Munnik3, Marten R Nijziel4, Nicole M A Blijlevens1, Marjolijn C Jongmans3,5,6, Bert A van der Reijden7, Yolba Smit1, Paul P Brons2,8, Waander L van Heerde2, Saskia E M Schols1,2.   

Abstract

INTRODUCTION: Bleeding assessment tools and laboratory phenotyping often remain inconclusive in patients with a haemorrhagic diathesis. AIM: To describe the phenotype and genetic profile of patients with a bleeding tendency.
METHODS: Whole exome sequencing (WES) was incorporated in the routine diagnostic pathway of patients with thrombocytopenia (n = 17), platelet function disorders (n = 19) and an unexplained bleeding tendency (n = 51). The analysis of a panel of 126 OMIM (Online Mendelian Inheritance in Man) genes involved in thrombosis and haemostasis was conducted, and if negative, further exome-wide analysis was performed if informed consent given.
RESULTS: Eighteen variants were detected in 15 patients from a total of 87 patients (17%). Causative variants were observed in MYH9 (two cases), SLFN14, P2RY12 and GP9. In addition, one case was considered solved due to combined carriership of F7 and F13A1 variants and one with combined carriership of F2, F8 and VWF, all variants related to secondary haemostasis protein aberrations. Two variants of uncertain significance (VUS) were found in two primary haemostasis genes: GFI1B and VWF. Eight patients were carriers of autosomal recessive disorders. Exome-wide analysis was performed in 54 cases and identified three variants in candidate genes.
CONCLUSION: Based on our findings, we conclude that performing WES at the end of the diagnostic trajectory can be of additive value to explain the complete bleeding phenotype in patients without a definite diagnosis after conventional laboratory tests. Discovery of combinations of (novel) genes that predispose to bleeding will increase the diagnostic yield in patients with an unexplained bleeding diathesis.
© 2018 John Wiley & Sons Ltd.

Entities:  

Keywords:  bleeding disorders; genetic analysis; haemostasis diagnostics; personalized treatment; platelet disorders; whole exome sequencing

Mesh:

Substances:

Year:  2018        PMID: 30431218     DOI: 10.1111/hae.13638

Source DB:  PubMed          Journal:  Haemophilia        ISSN: 1351-8216            Impact factor:   4.287


  7 in total

1.  Heterozygous mutation SLFN14 K208N in mice mediates species-specific differences in platelet and erythroid lineage commitment.

Authors:  Rachel J Stapley; Christopher W Smith; Elizabeth J Haining; Andrea Bacon; Sian Lax; Vera P Pisareva; Andrey V Pisarev; Steve P Watson; Abdullah O Khan; Neil V Morgan
Journal:  Blood Adv       Date:  2021-01-26

2.  Platelet CD34 expression in a patient with a partial deletion of transcription factor subunit CBFB.

Authors:  Maaike G J M van Bergen; Joline L Saes; Annet Simons; Konnie M Hebeda; Yvonne M C Henskens; Wideke Barteling; Erik Huys; Britta A P Laros-van Gorkom; Saskia E M Schols; Frank W Preijers; Marjolijn C J Jongmans; Joop H Jansen; Bert A van der Reijden
Journal:  Am J Hematol       Date:  2020-04-08       Impact factor: 10.047

3.  Curated disease-causing genes for bleeding, thrombotic, and platelet disorders: Communication from the SSC of the ISTH.

Authors:  Karyn Megy; Kate Downes; Ilenia Simeoni; Loredana Bury; Joannella Morales; Rutendo Mapeta; Daniel B Bellissimo; Paul F Bray; Anne C Goodeve; Paolo Gresele; Michele Lambert; Pieter Reitsma; Willem H Ouwehand; Kathleen Freson
Journal:  J Thromb Haemost       Date:  2019-06-09       Impact factor: 5.824

4.  The Implementation Science for Genomic Health Translation (INSIGHT) Study in Epilepsy: Protocol for a Learning Health Care System.

Authors:  Elena Valeryevna Feofanova; Guo-Qiang Zhang; Samden Lhatoo; Ginger A Metcalf; Eric Boerwinkle; Eric Venner
Journal:  JMIR Res Protoc       Date:  2021-03-26

Review 5.  Schlafens Can Put Viruses to Sleep.

Authors:  Eui Tae Kim; Matthew D Weitzman
Journal:  Viruses       Date:  2022-02-21       Impact factor: 5.048

6.  Diagnostic work up of patients with increased bleeding tendency.

Authors:  Suzanne A M Zegers; Yolba Smit; Joline L Saes; Clint van Duren; Tim J Schuijt; Waander L van Heerde; Saskia E M Schols
Journal:  Haemophilia       Date:  2019-12-30       Impact factor: 4.287

Review 7.  SLFN14 gene mutations associated with bleeding.

Authors:  Rachel J Stapley; Vera P Pisareva; Andrey V Pisarev; Neil V Morgan
Journal:  Platelets       Date:  2019-08-04       Impact factor: 3.862

  7 in total

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