Literature DB >> 30425648

Semi-implicit Non-conforming Finite-Element Schemes for Cardiac Electrophysiology: A Framework for Mesh-Coarsening Heart Simulations.

Javiera Jilberto1, Daniel E Hurtado1,2.   

Abstract

The field of computational cardiology has steadily progressed toward reliable and accurate simulations of the heart, showing great potential in clinical applications such as the optimization of cardiac interventions and the study of pro-arrhythmic effects of drugs in humans, among others. However, the computational effort demanded by in-silico studies of the heart remains challenging, highlighting the need of novel numerical methods that can improve the efficiency of simulations while targeting an acceptable accuracy. In this work, we propose a semi-implicit non-conforming finite-element scheme (SINCFES) suitable for cardiac electrophysiology simulations. The accuracy and efficiency of the proposed scheme are assessed by means of numerical simulations of the electrical excitation and propagation in regular and biventricular geometries. We show that the SINCFES allows for coarse-mesh simulations that reduce the computation time when compared to fine-mesh models while delivering wavefront shapes and conduction velocities that are more accurate than those predicted by traditional finite-element formulations based on the same coarse mesh, thus improving the accuracy-efficiency trade-off of cardiac simulations.

Entities:  

Keywords:  cardiac electrophysiology; computational cardiology; conduction velocity; non-conforming finite elements; nonlinear finite elements

Year:  2018        PMID: 30425648      PMCID: PMC6218665          DOI: 10.3389/fphys.2018.01513

Source DB:  PubMed          Journal:  Front Physiol        ISSN: 1664-042X            Impact factor:   4.566


  23 in total

1.  Electromechanical model of excitable tissue to study reentrant cardiac arrhythmias.

Authors:  Martyn P Nash; Alexander V Panfilov
Journal:  Prog Biophys Mol Biol       Date:  2004 Jun-Jul       Impact factor: 3.667

2.  Space-discretization error analysis and stabilization schemes for conduction velocity in cardiac electrophysiology.

Authors:  S Pezzuto; J Hake; J Sundnes
Journal:  Int J Numer Method Biomed Eng       Date:  2016-01-18       Impact factor: 2.747

3.  Predicting drug-induced arrhythmias by multiscale modeling.

Authors:  Francisco Sahli Costabal; Jiang Yao; Ellen Kuhl
Journal:  Int J Numer Method Biomed Eng       Date:  2018-03-25       Impact factor: 2.747

4.  An accurate, fast and robust method to generate patient-specific cubic Hermite meshes.

Authors:  Pablo Lamata; Steven Niederer; David Nordsletten; David C Barber; Ishani Roy; D Rod Hose; Nic Smith
Journal:  Med Image Anal       Date:  2011-07-06       Impact factor: 8.545

5.  Generating Purkinje networks in the human heart.

Authors:  Francisco Sahli Costabal; Daniel E Hurtado; Ellen Kuhl
Journal:  J Biomech       Date:  2015-12-22       Impact factor: 2.712

6.  Numerical quadrature and operator splitting in finite element methods for cardiac electrophysiology.

Authors:  Shankarjee Krishnamoorthi; Mainak Sarkar; William S Klug
Journal:  Int J Numer Method Biomed Eng       Date:  2013-07-19       Impact factor: 2.747

7.  A displacement-based finite element formulation for incompressible and nearly-incompressible cardiac mechanics.

Authors:  Myrianthi Hadjicharalambous; Jack Lee; Nicolas P Smith; David A Nordsletten
Journal:  Comput Methods Appl Mech Eng       Date:  2014-06-01       Impact factor: 6.756

8.  Personalized Imaging and Modeling Strategies for Arrhythmia Prevention and Therapy.

Authors:  Natalia A Trayanova; Patrick M Boyle; Plamen P Nikolov
Journal:  Curr Opin Biomed Eng       Date:  2018-03

9.  High-order spectral/hp element discretisation for reaction-diffusion problems on surfaces: Application to cardiac electrophysiology.

Authors:  Chris D Cantwell; Sergey Yakovlev; Robert M Kirby; Nicholas S Peters; Spencer J Sherwin
Journal:  J Comput Phys       Date:  2014-01-15       Impact factor: 3.553

10.  Electrophysiology of Heart Failure Using a Rabbit Model: From the Failing Myocyte to Ventricular Fibrillation.

Authors:  Aditya V S Ponnaluri; Luigi E Perotti; Michael Liu; Zhilin Qu; James N Weiss; Daniel B Ennis; William S Klug; Alan Garfinkel
Journal:  PLoS Comput Biol       Date:  2016-06-23       Impact factor: 4.475

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  2 in total

Review 1.  Precision medicine in human heart modeling : Perspectives, challenges, and opportunities.

Authors:  M Peirlinck; F Sahli Costabal; J Yao; J M Guccione; S Tripathy; Y Wang; D Ozturk; P Segars; T M Morrison; S Levine; E Kuhl
Journal:  Biomech Model Mechanobiol       Date:  2021-02-12

2.  Non-ohmic tissue conduction in cardiac electrophysiology: Upscaling the non-linear voltage-dependent conductance of gap junctions.

Authors:  Daniel E Hurtado; Javiera Jilberto; Grigory Panasenko
Journal:  PLoS Comput Biol       Date:  2020-02-25       Impact factor: 4.475

  2 in total

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