Literature DB >> 30420429

Phage single-gene lysis: Finding the weak spot in the bacterial cell wall.

Karthik Chamakura1,2, Ry Young3,2.   

Abstract

In general, the last step in the vegetative cycle of bacterial viruses, or bacteriophages, is lysis of the host. dsDNA phages require multiple lysis proteins, including at least one enzyme that degrades the cell wall (peptidoglycan (PG)). In contrast, the lytic ssDNA and ssRNA phages have a single lysis protein that achieves cell lysis without enzymatically degrading the PG. Here, we review four "single-gene lysis" or Sgl proteins. Three of the Sgls block bacterial cell wall synthesis by binding to and inhibiting several enzymes in the PG precursor pathway. The target of the fourth Sgl, L from bacteriophage MS2, is still unknown, but we review evidence indicating that it is likely a protein involved in maintaining cell wall integrity. Although only a few phage genomes are available to date, the ssRNA Leviviridae are a rich source of novel Sgls, which may facilitate further unraveling of bacterial cell wall biosynthesis and discovery of new antibacterial agents.
© 2019 Chamakura and Young.

Entities:  

Keywords:  MraY; MurA; MurJ; antibiotic; autolysin; bacteriophage; cell wall; chaperone DnaJ (DnaJ); enzyme inhibitor; flippase; peptidoglycan; peptidoglycan biosynthesis; phage; single-gene lysis

Mesh:

Substances:

Year:  2018        PMID: 30420429      PMCID: PMC6416421          DOI: 10.1074/jbc.TM118.001773

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  82 in total

1.  The lysis protein E of phi X174 is a specific inhibitor of the MraY-catalyzed step in peptidoglycan synthesis.

Authors:  T G Bernhardt; D K Struck; R Young
Journal:  J Biol Chem       Date:  2000-11-14       Impact factor: 5.157

Review 2.  Structural perspective of peptidoglycan biosynthesis and assembly.

Authors:  Andrew L Lovering; Susan S Safadi; Natalie C J Strynadka
Journal:  Annu Rev Biochem       Date:  2012       Impact factor: 23.643

3.  Nucleotide sequence from the ssRNA bacteriophage JP34 resolves the discrepancy between serological and biophysical classification.

Authors:  M R Adhin; A Hirashima; J van Duin
Journal:  Virology       Date:  1989-05       Impact factor: 3.616

4.  The complete nucleotide sequence of the group II RNA coliphage GA.

Authors:  Y Inokuchi; R Takahashi; T Hirose; S Inayama; A B Jacobson; A Hirashima
Journal:  J Biochem       Date:  1986-04       Impact factor: 3.387

5.  Crystal structure of the MOP flippase MurJ in an inward-facing conformation.

Authors:  Alvin C Y Kuk; Ellene H Mashalidis; Seok-Yong Lee
Journal:  Nat Struct Mol Biol       Date:  2016-12-26       Impact factor: 15.369

6.  Lysis of Escherichia coli after infection with phiX174 depends on the regulation of the cellular autolytic system.

Authors:  W Lubitz; G Halfmann; R Plapp
Journal:  J Gen Microbiol       Date:  1984-05

7.  Deletion and fusion analysis of the phage phi X174 lysis gene E.

Authors:  D Maratea; K Young; R Young
Journal:  Gene       Date:  1985       Impact factor: 3.688

8.  MurA (MurZ), the enzyme that catalyzes the first committed step in peptidoglycan biosynthesis, is essential in Escherichia coli.

Authors:  E D Brown; E I Vivas; C T Walsh; R Kolter
Journal:  J Bacteriol       Date:  1995-07       Impact factor: 3.490

9.  Specific localization of the lysis protein of bacteriophage MS2 in membrane adhesion sites of Escherichia coli.

Authors:  B Walderich; J V Höltje
Journal:  J Bacteriol       Date:  1989-06       Impact factor: 3.490

10.  Hyperexpansion of RNA Bacteriophage Diversity.

Authors:  Siddharth R Krishnamurthy; Andrew B Janowski; Guoyan Zhao; Dan Barouch; David Wang
Journal:  PLoS Biol       Date:  2016-03-24       Impact factor: 8.029

View more
  6 in total

Review 1.  Single-gene lysis in the metagenomic era.

Authors:  Karthik R Chamakura; Ry Young
Journal:  Curr Opin Microbiol       Date:  2020-10-16       Impact factor: 7.934

Review 2.  The Bacterial Cell Wall: From Lipid II Flipping to Polymerization.

Authors:  Sujeet Kumar; Aurelio Mollo; Daniel Kahne; Natividad Ruiz
Journal:  Chem Rev       Date:  2022-03-11       Impact factor: 72.087

3.  Structural basis for the adsorption of a single-stranded RNA bacteriophage.

Authors:  Ran Meng; Mengqiu Jiang; Zhicheng Cui; Jeng-Yih Chang; Kailu Yang; Joanita Jakana; Xinzhe Yu; Zhao Wang; Bo Hu; Junjie Zhang
Journal:  Nat Commun       Date:  2019-07-16       Impact factor: 14.919

4.  YdfD, a Lysis Protein of the Qin Prophage, Is a Specific Inhibitor of the IspG-Catalyzed Step in the MEP Pathway of Escherichia coli.

Authors:  Zhifang Lu; Biying Wang; Zhiyu Qiu; Ruiling Zhang; Jimin Zheng; Zongchao Jia
Journal:  Int J Mol Sci       Date:  2022-01-29       Impact factor: 5.923

5.  Enhancing extracellular production of lipoxygenase in Escherichia coli by signal peptides and autolysis system.

Authors:  Cuiping Pang; Song Liu; Guoqiang Zhang; Jingwen Zhou; Guocheng Du; Jianghua Li
Journal:  Microb Cell Fact       Date:  2022-03-19       Impact factor: 5.328

6.  Rapid de novo evolution of lysis genes in single-stranded RNA phages.

Authors:  Karthik R Chamakura; Jennifer S Tran; Chandler O'Leary; Hannah G Lisciandro; Sophia F Antillon; Kameron D Garza; Elizabeth Tran; Lorna Min; Ry Young
Journal:  Nat Commun       Date:  2020-11-26       Impact factor: 14.919

  6 in total

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