| Literature DB >> 30419045 |
Jeremiah Hwee1,2, Lillian Sung3,4,5, Jeffrey C Kwong1,2,6,7,8, Rinku Sutradhar1,2,5, Karen Tu6,8, Jason D Pole1,2,9.
Abstract
While medical records have detailed information, they are limited in reach to the availability and accessibility of those records. On the other hand, administrative data while limited in scope, have a much further reach in coverage of an entire population. However, few studies have validated the use of administrative data for identifying infections in pediatric populations. Pediatric patients from Ontario, Canada aged <18 years were randomly sampled from the Electronic Medical Record Administrative data Linked Database (EMRALD). Using physician diagnoses from the electronic medical record (EMR) as the reference standard, we determined the criterion validity of physician billing claims in administrative data for identifying infectious disease syndromes from 2012 to 2014. Diagnosis codes were assessed by infection category (respiratory, skin and soft tissue, gastrointestinal, urinary tract and otitis externa) and for all infections combined. Sensitivity analyses assessed the performance if patients had more than one reason to visit the physician. We analysed 2,139 patients and found 33.3% of all visits were for an infection, and respiratory infections accounted for 67.6% of the infections. When we combined all infection categories, sensitivity was 0.74 (95% CI 0.70-0.77), specificity was 0.95 (95% CI 0.93-0.96), positive predictive value (PPV) was 0.87 (95% CI 0.84-0.90), and negative predictive value (NPV) was 0.88 (95% CI 0.86-0.89). For respiratory infections, sensitivity was 0.77 (95% CI 0.73-0.81), specificity was 0.96 (95% CI 0.95-0.97), PPV was 0.85 (95% CI 0.81-0.88), and NPV was 0.94 (95% CI 0.92-0.95). Similar performance was observed for skin and soft tissue, gastrointestinal, urinary tract, and otitis externa infections, but with lower sensitivity. Performance measures were highest when the patient visited the physician with only one health complaint. We found when using linked EMR data as the reference standard, administrative billing codes are reasonably accurate in identifying infections in a pediatric population.Entities:
Mesh:
Year: 2018 PMID: 30419045 PMCID: PMC6231686 DOI: 10.1371/journal.pone.0207468
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
The infections of interest from the electronic medical records and the corresponding Ontario Health Insurance Plan (OHIP) physician billing claim diagnosis codes.
| Infections | OHIP diagnosis code |
|---|---|
| Respiratory infections | |
| • Upper respiratory infections or common cold | 460 |
| • Otitis media | 381, 382 |
| • Conjunctivitis | 372 |
| • Streptococcal sore throat | 034 |
| • Acute sinusitis | 461 |
| • Acute tonsillitis | 463 |
| • Acute laryngitis or croup | 464 |
| • Pertussis or whooping cough | 033 |
| • Infectious mononucleosis | 075 |
| Lower respiratory infections | 486, 487, 466 |
| • Pneumonia | 486 |
| • Influenza | 487 |
| • Acute bronchitis | 466 |
| Skin and soft tissue infections | |
| • Warts | 078 |
| • Impetigo | 684 |
| • Chalazion or sty | 373 |
| • Cellulitis | 682 |
| • Chicken pox or varicella | 052 |
| • Dental carries or dental abscess | 521, 525 |
| • Boils | 680 |
| • Herpes simplex | 054 |
| • Ringworm | 110 |
| • Candidiasis or thrush | 112 |
| Gastroenteritis or viral diarrhea | 009 |
| • Pinworm | 127 |
| Urinary tract infections | 590, 595, 599 |
| Otitis externa infection | 380 |
Patient and physician characteristics of study cohort.
| Characteristic | EMRALD patients, n (%) |
|---|---|
| Number of patients | 2139 |
| Female | 1039 (48.6) |
| Age, average (SD) | 6.7 (5.4) |
| 0 to < 2 | 530 (24.8) |
| 2 to 5 | 509 (23.8) |
| 6 to 9 | 384 (18.0) |
| 10 to 14 | 488 (22.8) |
| 15 to 18 | 228 (10.7) |
| Rural residence | 410 (19.2) |
| Material deprivation | |
| 1 least | 613 (28.7) |
| 2 | 453 (21.2) |
| 3 | 408 (19.1) |
| 4 | 366 (17.2) |
| 5 most | 294 (13.8) |
| Chronic conditions or illnesses | |
| Complex chronic conditions | 77 (3.6) |
| Allergies | 27 (1.3) |
| Asthma or reactive airways | 203 (9.5) |
| Behavioral and emotional disorders with onset usually occurring in childhood and adolescence | 144 (6.7) |
| Mood disorders | 21 (1.0) |
| Pervasive and specific developmental disorders | 48 (2.2) |
| Number of physicians | 259 |
| Female | 145 (56.0) |
| Age, average (SD) | 44.0 (10.7) |
| <35 years | 71 (26.7) |
| 35 to 44 years | 85 (32.0) |
| 45 to 54 years | 58 (21.8) |
| 55 to 75 years | 52 (19.6) |
| Rural practice | 26 (10.0) |
| Family physician or general practitioner | 255 (98.5) |
| Canadian medical graduate | 230 (88.8) |
| International medical graduate | 29 (11.2) |
| Years of practice, average (IQR) | 17.0 (7 to 26) |
*Chronic conditions were identified through the electronic medical record’s cumulative patient profile; behavioural and emotional disorders, mood disorders and pervasive disorders were also identified through the cumulative patient profile as well as the diagnosis on the progress notes and were categorized based on International Classification of Disease-10 diseases categories. Material deprivation had 5 missing patients. SD represents standard deviation.
Performance measures of the Ontario Health Insurance Plan physician billing claims for identifying infectious syndromes compared to electronic medical records.
| Classification of infection | % infection in EMR | % infection in AD | Sensitivity | Specificity | PPV | NPV |
|---|---|---|---|---|---|---|
| Any infection | 33.3 | 28.1 | 74 (70–77) | 95 (93–96) | 87 (84–90) | 88 (86–89) |
| Respiratory infection | 22.5 | 20.5 | 77 (73–81) | 96 (95–97) | 85 (81–88) | 94 (92–95) |
| Skin and soft tissue infection | 8.3 | 4.8 | 49 (41–56) | 99 (99–100) | 86 (77–92) | 96 (95–96) |
| Gastrointestinal infection | 2.0 | 1.3 | 53 (38–69) | 100 (99–100) | 82 (63–94) | 99 (99–99) |
| Urinary tract infections | 1.3 | 1.0 | 50 (31–69) | 100 (99–100) | 64 (41–83) | 99 (99–100) |
| Otitis externa infection | 0.9 | 0.5 | 42 (20–67) | 100 (100–100) | 67 (35–90) | 99 (99–100) |
| Any infection | 30.4 | 27.4 | 79 (76–83) | 95 (94–96) | 88 (84–91) | 91 (90–93) |
| Respiratory infection | 20.3 | 20.1 | 84 (80–88) | 96 (95–97) | 85 (81–89) | 96 (95–97) |
| Skin and soft tissue infection | 7.3 | 5.0 | 57 (47–66) | 99 (98–99) | 82 (72–90) | 97 (96–97) |
| Gastrointestinal infection | 1.7 | 1.2 | 55 (36–74) | 100 (99–100) | 80 (56–94) | 99 (99–100) |
| Urinary tract infections | 0.7 | 0.8 | 73 (39–94) | 100 (99–100) | 62 (32–86) | 100 (99–100) |
| Otitis externa infection | 0.6 | 0.4 | 50 (19–81) | 100 (100–100) | 83 (36–100) | 100 (99–100) |
| Any infection | 44.9 | 30.8 | 61 (54–67) | 94 (90–96) | 89 (83–93) | 75 (70–79) |
| Respiratory infection | 31.0 | 22.0 | 62 (54–70) | 96 (93–98) | 87 (79–93) | 85 (81–88) |
| Skin and soft tissue infection | 12.2 | 4.1 | 33 (22–47) | 100 (99–100) | 100 (83–100) | 91 (89–94) |
| Gastrointestinal infection | 2.7 | 1.6 | 54 (25–81) | 100 (99–100) | 88 (47–100) | 99 (97–100) |
| Urinary tract infections | 3.5 | 1.8 | 35 (14–62) | 99 (98–100) | 67 (30–93) | 98 (96–99) |
| Otitis externa infection | 1.8 | 1.2 | 33 (7–70) | 99 (98–100) | 50 (12–88) | 99 (97–100) |
EMR = electronic medical records, AD = administrative data, PPV = positive predictive value, NPV = negative predictive value.
Performance measures of the Ontario Health Insurance Plan physician billing claims for identifying specific infectious syndromes compared to electronic medical records.
| Classification of infectious syndrome | % infection in EMR | % infection in AD | Sensitivity | Specificity | PPV | NPV |
|---|---|---|---|---|---|---|
| Upper respiratory infection + conjunctivitis + otitis media | 18.9 | 17.8 | 75 (71–80) | 96 (94–96) | 80 (75–84) | 94 (93–95) |
| Upper respiratory infection (Pharyngitis, sinusitis, tonsillitis, laryngitis, or streptococcal sore throat) | 13.6 | 11.9 | 69 (63–74) | 97 (96–98) | 79 (73–84) | 95 (94–96) |
| Otitis media | 4.7 | 4.4 | 72 (62–80) | 99 (98–99) | 77 (67–85) | 99 (98–99) |
| Conjunctivitis | 1.4 | 1.6 | 77 (58–90) | 99 (99–100) | 68 (49–83) | 100 (99–100) |
| Strep throat | 2.2 | 1.0 | 32 (19–47) | 100 (99–100) | 71 (48–89) | 99 (98–99) |
| Bronchitis | 0.6 | 0.7 | 64 (35–87) | 100 (99–100) | 56 (30–80) | 100 (99–100) |
| Croup or laryngitis | 0.8 | 0.4 | 41(18–67) | 100 (100–100) | 88 (47–100) | 100 (99–100) |
| Tonsillitis | 0.5 | 0.6 | 70 (35–93) | 100 (99–100) | 50 (23–77) | 100 (100–100) |
| Sinusitis | 0.5 | 0.5 | 73 (39–94) | 100 (100–100) | 67 (35–90) | 100 (100–100) |
| Infectious mononucleosis | 0.5 | <0.03 | 40 (12–74) | 100 (100–100) | 100 (40–100) | 100 (99–100) |
| Lower respiratory infection (unspecified lower respiratory infection, pneumonia, influenza, or acute bronchitis) | 3.1 | 2.4 | 62 (49–73) | 100 (99–100) | 81 (67–90) | 99 (98–99) |
| Pneumonia | 2.0 | 1.3 | 60 (44–75) | 100 (100–100) | 90 (73–98) | 99 (99–100) |
| Warts | 2.7 | 2.1 | 69 (55–80) | 100 (99–100) | 87 (74–95) | 99 (99–100) |
| Impetigo | 1.0 | 0.7 | 59 (36–79) | 100 (100–100) | 87 (60–98) | 100 (99–100) |
| Chalezon or stye | 0.6 | 0.04 | 54 (25–81) | 100 (100–100) | 88 (47–100) | 100 (99–100) |
| Cellulitis | 0.5 | 0.5 | 55 (23–83) | 100 (100–100) | 60 (26–88) | 100 (99–100) |
| Gastroenteritis, viral diarrhea, or viral gastritis | 1.7 | 1.2 | 59 (42–75) | 100 (99–100) | 81 (62–94) | 99 (99–100) |
| Urinary tract infections | 1.3 | 1.0 | 50 (31–69) | 100 (99–100) | 64 (41–83) | 99 (99–100) |
Infectious syndromes with ≤10 events from the electronic medical record are not reported. EMR = electronic medical records, AD = administrative data, PPV = positive predictive value, NPV = negative predictive value. Cells suppressed because of small cell size (direct or by inference).