Literature DB >> 30391332

ADAR RNA editing in innate immune response phasing, in circadian clocks and in sleep.

Ketty Sinigaglia1, Dagmara Wiatrek1, Anzer Khan2, David Michalik1, Nagraj Sambrani1, Jiří Sedmík1, Dragana Vukić2, Mary A O'Connell1, Liam P Keegan3.   

Abstract

Adenosine deaminases acting on RNA (ADARs) convert adenosine to inosine in dsRNA. ADAR editing in pre-mRNAs recodes open reading frames and alters splicing, mRNA structure and interactions with miRNAs. Here, we review ADAR gene expression, splice forms, posttranslational modifications, subcellular localizations and functions of ADAR protein isoforms. ADAR1 edits cellular dsRNA to prevent aberrant activation of cytoplasmic antiviral dsRNA sensors; ADAR1 mutations lead to aberrant expression of interferon in Aicardi Goutières syndrome (AGS), a human congenital encephalopathy. We review related studies on mouse Adar1 mutant phenotypes, their rescues by preventing signaling from the antiviral RIG-I-like Sensors (RLRs), as well as Adar1 mechanisms in innate immune suppression and other roles of Adar1, including editing-independent effects. ADAR2, expressed primarily in CNS, edits glutamate receptor transcripts; regulation of ADAR2 activity in response to neuronal activity mediates homeostatic synaptic plasticity of vertebrate AMPA and kainite receptors. In Drosophila, synapses and synaptic proteins show dramatic decreases at night during sleep; Drosophila Adar, an orthologue of ADAR2, edits hundreds of mRNAs; the most conserved editing events occur in transcripts encoding synapse-associated proteins. Adar mutant flies exhibit locomotion defects associated with very increased sleep pressure resulting from a failure of homeostatic synaptic processes. A study on Adar2 mutant mice identifies a new role in circadian rhythms, acting indirectly through miRNAs such as let-7 to modulate levels of let-7 target mRNAs; ADAR1 also regulates let-7 miRNA processing. Drosophila ADAR, an orthologue of vertebrate ADAR2, also regulates let-7 miRNA levels and Adar mutant flies have a circadian mutant phenotype.
Copyright © 2018 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  ADAR; Circadian rhythm; Epitranscriptome; Innate immunity; RNA editing; Sleep; dsRNA; microRNA

Mesh:

Substances:

Year:  2018        PMID: 30391332     DOI: 10.1016/j.bbagrm.2018.10.011

Source DB:  PubMed          Journal:  Biochim Biophys Acta Gene Regul Mech        ISSN: 1874-9399            Impact factor:   4.490


  9 in total

Review 1.  Roles of peripheral clocks: lessons from the fly.

Authors:  Evrim Yildirim; Rachel Curtis; Dae-Sung Hwangbo
Journal:  FEBS Lett       Date:  2021-12-16       Impact factor: 4.124

2.  Bi-allelic ADARB1 Variants Associated with Microcephaly, Intellectual Disability, and Seizures.

Authors:  Tiong Yang Tan; Jiří Sedmík; Mark P Fitzgerald; Rivka Sukenik Halevy; Liam P Keegan; Ingo Helbig; Lina Basel-Salmon; Lior Cohen; Rachel Straussberg; Wendy K Chung; Mayada Helal; Reza Maroofian; Henry Houlden; Jane Juusola; Simon Sadedin; Lynn Pais; Katherine B Howell; Susan M White; John Christodoulou; Mary A O'Connell
Journal:  Am J Hum Genet       Date:  2020-03-26       Impact factor: 11.025

Review 3.  The Regulation of RNA Modification Systems: The Next Frontier in Epitranscriptomics?

Authors:  Matthias R Schaefer
Journal:  Genes (Basel)       Date:  2021-02-26       Impact factor: 4.096

4.  Adar RNA editing-dependent and -independent effects are required for brain and innate immune functions in Drosophila.

Authors:  Patricia Deng; Anzer Khan; Dionna Jacobson; Nagraj Sambrani; Leeanne McGurk; Xianghua Li; Aswathy Jayasree; Jan Hejatko; Galit Shohat-Ophir; Mary A O'Connell; Jin Billy Li; Liam P Keegan
Journal:  Nat Commun       Date:  2020-03-27       Impact factor: 14.919

Review 5.  Role of MicroRNAs in Parkinson's Disease.

Authors:  Suh Yee Goh; Yin Xia Chao; Shaikali Thameem Dheen; Eng-King Tan; Samuel Sam-Wah Tay
Journal:  Int J Mol Sci       Date:  2019-11-12       Impact factor: 5.923

Review 6.  RNA editing in the forefront of epitranscriptomics and human health.

Authors:  Theodoulakis Christofi; Apostolos Zaravinos
Journal:  J Transl Med       Date:  2019-09-23       Impact factor: 5.531

Review 7.  The effects of RNA editing in cancer tissue at different stages in carcinogenesis.

Authors:  Małgorzata Kurkowiak; Łukasz Arcimowicz; Elżbieta Chruściel; Zuzanna Urban-Wójciuk; Ines Papak; Liam Keegan; Mary O'Connell; Jacek Kowalski; Ted Hupp; Natalia Marek-Trzonkowska
Journal:  RNA Biol       Date:  2021-02-17       Impact factor: 4.652

Review 8.  mRNA Metabolism in Cardiac Development and Disease: Life After Transcription.

Authors:  Chen Gao; Yibin Wang
Journal:  Physiol Rev       Date:  2019-11-21       Impact factor: 37.312

9.  The RNA editing enzyme ADAR2 restricts L1 mobility.

Authors:  Loredana Frassinelli; Elisa Orecchini; Sofian Al-Wardat; Marco Tripodi; Carmine Mancone; Margherita Doria; Silvia Galardi; Silvia Anna Ciafrè; Alessandro Michienzi
Journal:  RNA Biol       Date:  2021-07-05       Impact factor: 4.652

  9 in total

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