Literature DB >> 30391089

Stable Intronic Sequence RNAs (sisRNAs): An Expanding Universe.

Seow Neng Chan1, Jun Wei Pek2.   

Abstract

Intronic sequences are often regarded as 'nonsense' transcripts that are rapidly degraded. We highlight here recent studies on intronic sequences that play regulatory roles as long noncoding RNAs (lncRNAs) which are classified as sisRNAs. Interestingly, sisRNAs come in different forms and are produced via a variety of ways. They regulate genes at the DNA, RNA, and protein levels, and frequently engage in autoregulatory feedback loops to ensure cellular homeostasis under normal and stress conditions. Future directions, evolutionary insights, and potential implications of dysregulated sisRNAs are also discussed, especially in relation to human pathogenesis.
Copyright © 2018 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  feedback; homeostasis; intron; lariat; noncoding RNA; sisRNA; transcription regulation

Mesh:

Substances:

Year:  2018        PMID: 30391089     DOI: 10.1016/j.tibs.2018.09.016

Source DB:  PubMed          Journal:  Trends Biochem Sci        ISSN: 0968-0004            Impact factor:   13.807


  10 in total

Review 1.  Intronic RNA: Ad'junk' mediator of post-transcriptional gene regulation.

Authors:  Christopher R Neil; William G Fairbrother
Journal:  Biochim Biophys Acta Gene Regul Mech       Date:  2019-11-01       Impact factor: 4.490

Review 2.  The many ways Epstein-Barr virus takes advantage of the RNA tool kit.

Authors:  Nara Lee
Journal:  RNA Biol       Date:  2021-01-30       Impact factor: 4.652

3.  Maternally inherited intron coordinates primordial germ cell homeostasis during Drosophila embryogenesis.

Authors:  Ismail Osman; Jun Wei Pek
Journal:  Cell Death Differ       Date:  2020-10-22       Impact factor: 15.828

4.  SON protects nascent transcripts from unproductive degradation by counteracting DIP1.

Authors:  Mandy Li-Ian Tay; Jun Wei Pek
Journal:  PLoS Genet       Date:  2019-11-15       Impact factor: 5.917

5.  Maternal starvation primes progeny response to nutritional stress.

Authors:  Kelly Voo; Jeralyn Wen Hui Ching; Joseph Wee Hao Lim; Seow Neng Chan; Amanda Yunn Ee Ng; Jasmine Yi Ying Heng; Shiao See Lim; Jun Wei Pek
Journal:  PLoS Genet       Date:  2021-11-29       Impact factor: 5.917

6.  Unique and Repeated Stwintrons (Spliceosomal Twin Introns) in the Hypoxylaceae.

Authors:  Erzsébet Fekete; Fruzsina Pénzes; Norbert Ág; Viktória Ág-Rácz; Erzsébet Sándor; Claudio Scazzocchio; Michel Flipphi; Levente Karaffa
Journal:  J Fungi (Basel)       Date:  2022-04-13

7.  Stable intronic sequence RNAs (sisRNAs) are selected regions in introns with distinct properties.

Authors:  Jing Jin; Ximiao He; Elena Silva
Journal:  BMC Genomics       Date:  2020-04-07       Impact factor: 3.969

Review 8.  Beyond Back Splicing, a Still Poorly Explored World: Non-Canonical Circular RNAs.

Authors:  Annie Robic; Christa Kühn
Journal:  Genes (Basel)       Date:  2020-09-22       Impact factor: 4.096

Review 9.  Functions and mechanisms of RNA tailing by metazoan terminal nucleotidyltransferases.

Authors:  Vladyslava Liudkovska; Andrzej Dziembowski
Journal:  Wiley Interdiscip Rev RNA       Date:  2020-07-22       Impact factor: 9.957

10.  Structural Characterization of the Highly Restricted Down Syndrome Critical Region on 21q22.13: New KCNJ6 and DSCR4 Transcript Isoforms.

Authors:  Francesca Antonaros; Margherita Pitocco; Domenico Abete; Beatrice Vione; Allison Piovesan; Lorenza Vitale; Pierluigi Strippoli; Maria Caracausi; Maria Chiara Pelleri
Journal:  Front Genet       Date:  2021-12-08       Impact factor: 4.599

  10 in total

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