Literature DB >> 30386853

Automated Identification of Causal Moderators in Time-Series Data.

Min Zheng1, Jan Claassen2, Samantha Kleinberg3.   

Abstract

Causal inference is often taken to mean finding links between individual variables. However in many real-world cases, such as in biological systems, relationships are more complex, with groups of factors needed to produce an effect, or some factors only modifying other relationships rather than producing outcomes alone. For instance, weight may alter the efficacy of a drug without causing side effects itself. Such moderating factors may change the timing, intensity, or probability of a causal relationship. Distinguishing moderators from genuine causes can lead to more effective medical interventions, and better strategies for bringing about a desired effect, since a moderator alone is ineffective. However, there have not yet been algorithms to automatically infer moderators in a large-scale automated way, and they cannot be easily read off from causal graphs. We introduce a set of temporal logic rules to automatically identify the asymmetric roles of causes and moderators in a computationally efficient manner. Experiments on simulated data demonstrate that even in challenging cases we can find moderators and avoid confounding, and on real neurological ICU data we show how the approach can find more descriptive and meaningful relationships than the state of the art.

Entities:  

Keywords:  causality; health informatics; time series

Year:  2018        PMID: 30386853      PMCID: PMC6207199     

Source DB:  PubMed          Journal:  Proc Mach Learn Res


  13 in total

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Review 2.  Mediators and moderators of treatment effects in randomized clinical trials.

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4.  Combining Fourier and lagged k-nearest neighbor imputation for biomedical time series data.

Authors:  Shah Atiqur Rahman; Yuxiao Huang; Jan Claassen; Nathaniel Heintzman; Samantha Kleinberg
Journal:  J Biomed Inform       Date:  2015-10-21       Impact factor: 6.317

5.  Causal Clustering for 1-Factor Measurement Models.

Authors:  Erich Kummerfeld; Joseph Ramsey
Journal:  KDD       Date:  2016

6.  Structural nested mean models for assessing time-varying effect moderation.

Authors:  Daniel Almirall; Thomas Ten Have; Susan A Murphy
Journal:  Biometrics       Date:  2009-04-13       Impact factor: 2.571

7.  Nonconvulsive seizures after subarachnoid hemorrhage: Multimodal detection and outcomes.

Authors:  Jan Claassen; Adler Perotte; David Albers; Samantha Kleinberg; J Michael Schmidt; Bin Tu; Neeraj Badjatia; Hector Lantigua; Lawrence J Hirsch; Stephan A Mayer; E Sander Connolly; George Hripcsak
Journal:  Ann Neurol       Date:  2013-06-27       Impact factor: 10.422

8.  A general model for testing mediation and moderation effects.

Authors:  Amanda J Fairchild; David P MacKinnon
Journal:  Prev Sci       Date:  2009-06

Review 9.  From concepts, theory, and evidence of heterogeneity of treatment effects to methodological approaches: a primer.

Authors:  Richard J Willke; Zhiyuan Zheng; Prasun Subedi; Rikard Althin; C Daniel Mullins
Journal:  BMC Med Res Methodol       Date:  2012-12-13       Impact factor: 4.615

10.  Causal Structure of Brain Physiology after Brain Injury from Subarachnoid Hemorrhage.

Authors:  Jan Claassen; Shah Atiqur Rahman; Yuxiao Huang; Hans-Peter Frey; J Michael Schmidt; David Albers; Cristina Maria Falo; Soojin Park; Sachin Agarwal; E Sander Connolly; Samantha Kleinberg
Journal:  PLoS One       Date:  2016-04-28       Impact factor: 3.240

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  1 in total

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Journal:  Curr Genomics       Date:  2021-12-16       Impact factor: 2.689

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